| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317325
Identifier: 158317325
GI number: 158317325
Start: 6756148
End: 6756843
Strand: Reverse
Name: 158317325
Synonym: Franean1_5575
Alternate gene names: NA
Gene position: 6756843-6756148 (Counterclockwise)
Preceding gene: 158317327
Following gene: 158317324
Centisome position: 75.23
GC content: 78.16
Gene sequence:
>696_bases GTGGAACCGGACCTGCCGACATCACTGCCCGCCAAGCTGTACCTCCTCGCCTACAACCTCGAGAAGGACCGGATGTACCC GAACCGGCGCCTCGGTCAGGCGCTGCGGGCCGCCGCCCTCACCGAGCTGTGGGCGGGCGGCTGGCTCGCCGACGATCACG GCCTGGCCCGGCTGACCGACGGGCCGACCCCCGACGGTGGGCCAGGTGGCGGCCCGTCCGGCCGGGCGGTGCCGACGCCG CGCGGCGGGGTGGGGCGGGCCGACCCGGTGGTCGCGGCGGTGCACCGGCAGATCACCGCCGCGGCCGAGCCGCGTACCTG GGCGGCCTGGATCGACCTCGACCACCGGGCGGCCGTGGTCGAGACCCGTGACGACCTCGAGGCGGCCCGGTGGGTGCGGG TCGCCCGTGGGCAGGTCCTCGCCGTGATCCCGACAACCGCCGTCGCGCTGCTCGAGCGGCCCAGGGTCCGGGAGCTCAAC CGGGCGGCCGGGCGGGTCCTGCGGGGGGAGGTAGCGCCCGAGGACGCCGCGCCGGACCTCGTCGCGCTGGTGGCCCTCGC CGCCGCCGGGCAGGTGATCACTCTGGTGAGCGCGGGCCAGCGCAGGGCGTTCCCCGACCGGCTGACGGATCTCGTCGCGC GGACCGGCCCCGCCGCCGCCGCGCTCGCGGGCCGCCGTCGCGCCGCTGTGGGCTAG
Upstream 100 bases:
>100_bases GGGCGACGACCTCACGTTCGTCCACCGCCTCATTGTCTCTCCCGGCGGCCTGTCGCGTTCACGTCCGTCGCATGTCCGCT CCGCTCGGTAGACAGGTGGT
Downstream 100 bases:
>100_bases CGCGACGCAGTCGGCCTGGCGCGATGCGCGCGCGTCGGTGGCCACAAGTCCCCCAAGGTGTGAGACAGCGCGCCCGGGTT GGGCGTGACCAGCTATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MEPDLPTSLPAKLYLLAYNLEKDRMYPNRRLGQALRAAALTELWAGGWLADDHGLARLTDGPTPDGGPGGGPSGRAVPTP RGGVGRADPVVAAVHRQITAAAEPRTWAAWIDLDHRAAVVETRDDLEAARWVRVARGQVLAVIPTTAVALLERPRVRELN RAAGRVLRGEVAPEDAAPDLVALVALAAAGQVITLVSAGQRRAFPDRLTDLVARTGPAAAALAGRRRAAVG
Sequences:
>Translated_231_residues MEPDLPTSLPAKLYLLAYNLEKDRMYPNRRLGQALRAAALTELWAGGWLADDHGLARLTDGPTPDGGPGGGPSGRAVPTP RGGVGRADPVVAAVHRQITAAAEPRTWAAWIDLDHRAAVVETRDDLEAARWVRVARGQVLAVIPTTAVALLERPRVRELN RAAGRVLRGEVAPEDAAPDLVALVALAAAGQVITLVSAGQRRAFPDRLTDLVARTGPAAAALAGRRRAAVG >Mature_231_residues MEPDLPTSLPAKLYLLAYNLEKDRMYPNRRLGQALRAAALTELWAGGWLADDHGLARLTDGPTPDGGPGGGPSGRAVPTP RGGVGRADPVVAAVHRQITAAAEPRTWAAWIDLDHRAAVVETRDDLEAARWVRVARGQVLAVIPTTAVALLERPRVRELN RAAGRVLRGEVAPEDAAPDLVALVALAAAGQVITLVSAGQRRAFPDRLTDLVARTGPAAAALAGRRRAAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24328; Mature: 24328
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPDLPTSLPAKLYLLAYNLEKDRMYPNRRLGQALRAAALTELWAGGWLADDHGLARLTD CCCCCCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEECC GPTPDGGPGGGPSGRAVPTPRGGVGRADPVVAAVHRQITAAAEPRTWAAWIDLDHRAAVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEE ETRDDLEAARWVRVARGQVLAVIPTTAVALLERPRVRELNRAAGRVLRGEVAPEDAAPDL CCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHH VALVALAAAGQVITLVSAGQRRAFPDRLTDLVARTGPAAAALAGRRRAAVG HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHCCC >Mature Secondary Structure MEPDLPTSLPAKLYLLAYNLEKDRMYPNRRLGQALRAAALTELWAGGWLADDHGLARLTD CCCCCCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEECC GPTPDGGPGGGPSGRAVPTPRGGVGRADPVVAAVHRQITAAAEPRTWAAWIDLDHRAAVV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEE ETRDDLEAARWVRVARGQVLAVIPTTAVALLERPRVRELNRAAGRVLRGEVAPEDAAPDL CCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHH VALVALAAAGQVITLVSAGQRRAFPDRLTDLVARTGPAAAALAGRRRAAVG HHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA