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The map label for this gene is fadE25 [H]

Identifier: 158317322

GI number: 158317322

Start: 6752435

End: 6753631

Strand: Direct

Name: fadE25 [H]

Synonym: Franean1_5572

Alternate gene names: 158317322

Gene position: 6752435-6753631 (Clockwise)

Preceding gene: 158317320

Following gene: 158317323

Centisome position: 75.18

GC content: 75.52

Gene sequence:

>1197_bases
ATGTCCCGAACCGTCACCGCCGCGGGGCTGACCACCCTCGTCGACGACCTGCTGCGGAGCCATCCGCCGGCCGCGACGGA
CCCGCACGAGTTCCTCGGCGCGCGGTTCGACGCCGGGCTCGCCTGGGTCTGGGCCGGGCCGGGCGACGGCGGCCTCGGCG
CCGACCCGGCGCTGCAGCCGCTGATCGAACAGCGGCTCGCCGCCGCGGGTGCGCCGGCGCCGTTCCGATACAACCCGATC
GGCATCGGCATGACCGGGCCGACGCTGCTCACCCACGGCACACCCGGGCAGCGCGGGGCCTACCTGCGCCCGCTCTTCGC
CGGCACCGAGGTCTGGAGCCAGCTGTTCAGCGAGCCCGGCGCCGGCTCGGACGTCGCCGGCCTCGCCACCCGGGCCCGCC
GCGACGGCGACGAGTGGATCGTGGACGGGCAGAAGGTGTGGACGTCCTATGCGCATATCGCCCGCCGGGGCCTGCTGATC
GCCCGCACCGATCCGGACGTGCCCAAGCACGCCGGGCTGACCGCGTTCGTGGTGGACCTGACCGCGTCCGGGGTGGAGGT
GCGCCCGCTGCGGCAGCTGACCGGTGAGGCCGAGTTCAACGAGGTCTTCTTCACCGCGGCCCGCATCCCCGACACCCAGC
GCCTCGGCCCGGTCGGCGCGGGATGGCGGGTCGCCACCACCACGCTGATGAACGAGCGGGTCTCCCTCGGCGGGGGGCTG
AGCGGCGGCGCCGATCCGGGCGCGGCGCTCCTCGCCGCCTACCAGGAGGCCGCCGACCGCGGCGACGGGAACCCGGTGCG
CCGCGACCAGGCGATCCGGCTGTGGATCGAGGCGAACGTCAACGCCCTGACCGCGGCGCGCGCGGCGGCGGGCGGCAACC
GCGGCCGGCCCGGGCCGGAGGGCTCGGTGCTCAAGCTGGCAGGCGCCGAGCACAGCCGCCGCGCGGCGGCGTACCTGGTG
GACCTGATGGGCCCGGCGGGCACCCTCATCCCGGACTACCGGATGACCCGCCCGGGCCTGCCCCTCGGCGGCGAGGGCCC
CCGGGACACCGCGGCCGCCTTCCTGCGATCACGCGCCAACACGATCGAAGGCGGGACGTCGGAGATCCTGCGCAACATAC
TCGGCGAACGGGTGCTCGGCCTGCCCGGCGACATCCGCGTCGACAAGGATGTGTCCTGGCGTGACATACCGCGCTGA

Upstream 100 bases:

>100_bases
GCGCACCGCTGTGTCTGATGTGCCGCTCGGTGGCCGGATGACATCCCATTGCCGCACCGGGCGGTGTCGGTTACGTTCCG
GCTGGCGAGAGGAGCGTGAG

Downstream 100 bases:

>100_bases
CCGCCCGTCGCCGAGAGGAGCTCCGTGAGTCTGGTGTTCTCCGACGAACAGGAGGAGCTGCGCCGCACGGTGCGGTCGTT
CCTCGAGCACGCCTCCCCCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSRTVTAAGLTTLVDDLLRSHPPAATDPHEFLGARFDAGLAWVWAGPGDGGLGADPALQPLIEQRLAAAGAPAPFRYNPI
GIGMTGPTLLTHGTPGQRGAYLRPLFAGTEVWSQLFSEPGAGSDVAGLATRARRDGDEWIVDGQKVWTSYAHIARRGLLI
ARTDPDVPKHAGLTAFVVDLTASGVEVRPLRQLTGEAEFNEVFFTAARIPDTQRLGPVGAGWRVATTTLMNERVSLGGGL
SGGADPGAALLAAYQEAADRGDGNPVRRDQAIRLWIEANVNALTAARAAAGGNRGRPGPEGSVLKLAGAEHSRRAAAYLV
DLMGPAGTLIPDYRMTRPGLPLGGEGPRDTAAAFLRSRANTIEGGTSEILRNILGERVLGLPGDIRVDKDVSWRDIPR

Sequences:

>Translated_398_residues
MSRTVTAAGLTTLVDDLLRSHPPAATDPHEFLGARFDAGLAWVWAGPGDGGLGADPALQPLIEQRLAAAGAPAPFRYNPI
GIGMTGPTLLTHGTPGQRGAYLRPLFAGTEVWSQLFSEPGAGSDVAGLATRARRDGDEWIVDGQKVWTSYAHIARRGLLI
ARTDPDVPKHAGLTAFVVDLTASGVEVRPLRQLTGEAEFNEVFFTAARIPDTQRLGPVGAGWRVATTTLMNERVSLGGGL
SGGADPGAALLAAYQEAADRGDGNPVRRDQAIRLWIEANVNALTAARAAAGGNRGRPGPEGSVLKLAGAEHSRRAAAYLV
DLMGPAGTLIPDYRMTRPGLPLGGEGPRDTAAAFLRSRANTIEGGTSEILRNILGERVLGLPGDIRVDKDVSWRDIPR
>Mature_397_residues
SRTVTAAGLTTLVDDLLRSHPPAATDPHEFLGARFDAGLAWVWAGPGDGGLGADPALQPLIEQRLAAAGAPAPFRYNPIG
IGMTGPTLLTHGTPGQRGAYLRPLFAGTEVWSQLFSEPGAGSDVAGLATRARRDGDEWIVDGQKVWTSYAHIARRGLLIA
RTDPDVPKHAGLTAFVVDLTASGVEVRPLRQLTGEAEFNEVFFTAARIPDTQRLGPVGAGWRVATTTLMNERVSLGGGLS
GGADPGAALLAAYQEAADRGDGNPVRRDQAIRLWIEANVNALTAARAAAGGNRGRPGPEGSVLKLAGAEHSRRAAAYLVD
LMGPAGTLIPDYRMTRPGLPLGGEGPRDTAAAFLRSRANTIEGGTSEILRNILGERVLGLPGDIRVDKDVSWRDIPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=212, Percent_Identity=30.6603773584906, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4557233, Length=306, Percent_Identity=28.1045751633987, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI4557231, Length=246, Percent_Identity=28.0487804878049, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI187960098, Length=246, Percent_Identity=28.0487804878049, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI4501857, Length=335, Percent_Identity=23.5820895522388, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI4557235, Length=264, Percent_Identity=27.6515151515151, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI76496475, Length=264, Percent_Identity=27.6515151515151, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI21361497, Length=245, Percent_Identity=28.1632653061224, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI226958412, Length=154, Percent_Identity=31.8181818181818, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI226958414, Length=154, Percent_Identity=31.8181818181818, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI7656849, Length=318, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081958, Length=385, Percent_Identity=25.974025974026, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17570075, Length=344, Percent_Identity=27.3255813953488, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=320, Percent_Identity=27.8125, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=316, Percent_Identity=28.1645569620253, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=214, Percent_Identity=29.9065420560748, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=167, Percent_Identity=31.7365269461078, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=322, Percent_Identity=26.7080745341615, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=381, Percent_Identity=24.4094488188976, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17505929, Length=207, Percent_Identity=29.4685990338164, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=217, Percent_Identity=27.6497695852535, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=194, Percent_Identity=28.8659793814433, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=240, Percent_Identity=27.5, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71985184, Length=168, Percent_Identity=30.952380952381, Blast_Score=64, Evalue=1e-10,
Organism=Drosophila melanogaster, GI24660351, Length=236, Percent_Identity=30.9322033898305, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24666513, Length=315, Percent_Identity=27.3015873015873, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21356377, Length=302, Percent_Identity=26.8211920529801, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355753, Length=352, Percent_Identity=26.7045454545455, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281363737, Length=170, Percent_Identity=34.7058823529412, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646207, Length=297, Percent_Identity=25.9259259259259, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41838; Mature: 41707

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTVTAAGLTTLVDDLLRSHPPAATDPHEFLGARFDAGLAWVWAGPGDGGLGADPALQP
CCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCEEEEEECCCCCCCCCCHHHHH
LIEQRLAAAGAPAPFRYNPIGIGMTGPTLLTHGTPGQRGAYLRPLFAGTEVWSQLFSEPG
HHHHHHHHCCCCCCCEECCEEECCCCCEEEECCCCCCCCCEECHHHHHHHHHHHHHCCCC
AGSDVAGLATRARRDGDEWIVDGQKVWTSYAHIARRGLLIARTDPDVPKHAGLTAFVVDL
CCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEE
TASGVEVRPLRQLTGEAEFNEVFFTAARIPDTQRLGPVGAGWRVATTTLMNERVSLGGGL
CCCCCEEHHHHHHCCCCCHHHEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
SGGADPGAALLAAYQEAADRGDGNPVRRDQAIRLWIEANVNALTAARAAAGGNRGRPGPE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCC
GSVLKLAGAEHSRRAAAYLVDLMGPAGTLIPDYRMTRPGLPLGGEGPRDTAAAFLRSRAN
CCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
TIEGGTSEILRNILGERVLGLPGDIRVDKDVSWRDIPR
CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SRTVTAAGLTTLVDDLLRSHPPAATDPHEFLGARFDAGLAWVWAGPGDGGLGADPALQP
CCEECHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHCCCEEEEEECCCCCCCCCCHHHHH
LIEQRLAAAGAPAPFRYNPIGIGMTGPTLLTHGTPGQRGAYLRPLFAGTEVWSQLFSEPG
HHHHHHHHCCCCCCCEECCEEECCCCCEEEECCCCCCCCCEECHHHHHHHHHHHHHCCCC
AGSDVAGLATRARRDGDEWIVDGQKVWTSYAHIARRGLLIARTDPDVPKHAGLTAFVVDL
CCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEE
TASGVEVRPLRQLTGEAEFNEVFFTAARIPDTQRLGPVGAGWRVATTTLMNERVSLGGGL
CCCCCEEHHHHHHCCCCCHHHEEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
SGGADPGAALLAAYQEAADRGDGNPVRRDQAIRLWIEANVNALTAARAAAGGNRGRPGPE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCC
GSVLKLAGAEHSRRAAAYLVDLMGPAGTLIPDYRMTRPGLPLGGEGPRDTAAAFLRSRAN
CCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
TIEGGTSEILRNILGERVLGLPGDIRVDKDVSWRDIPR
CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]