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The map label for this gene is idi [H]

Identifier: 158317320

GI number: 158317320

Start: 6750807

End: 6751490

Strand: Direct

Name: idi [H]

Synonym: Franean1_5570

Alternate gene names: 158317320

Gene position: 6750807-6751490 (Clockwise)

Preceding gene: 158317317

Following gene: 158317322

Centisome position: 75.16

GC content: 67.4

Gene sequence:

>684_bases
ATGGCTACCGCGAATCATCCTGGGCCCCAGGACATGATTTCTCGTCCACGTGATTCACACAGGTCGGGCGGGGCGGCAGT
AAAGGCGCCGGAGCTCGTCATACTACTCAGCCCGTCCGGCGACATCACAGGCACCACCCCGAAGGCTACCGTCCACGGAC
CGCAAACTCCCCTGCACCTGGCATTCTCCTCGTACGTCTTCGATGACATGGACCGGATCCTCGTCACGCGCCGCGCGTTG
GAGAAGCCGACCTGGCCCGGCGTGCTGACCAACACCTGCTGCGGCCACCCGGCCCCCGGGGAGGATTTCCGGGAAGCCAT
CTCGAGGCGGCTCCAGGAGGAGCTGGGTCTGCAGGTCCAGCGAATCGACCTGGCCCTGCCGGCGTTCCGCTACCGCTGCG
TCATGGACGACGGAATGGTGGAGAACGAGATCTGCCCGGTCTTTTTCACCCGGGCGTCGGGGCCGTTCCGAATCAATCCG
GACGAGGTGGCCGAGGCGTTCTGGCTCCCGTGGTCGAAGTTCGTCGACGACGTGACGAGCGGTGCCCTCGCGATCTCACC
CTGGTGCCGGCTCCAGGTGGAGCAGCTGCGCAAGCTCGGGCCGTCGCCCCGGCACTGGCCTTCGGCGCCGGATGACCAGC
TCCCCCCGGCCGCCCGGCAGAACCGCGCAGACTACGCCGGCTGA

Upstream 100 bases:

>100_bases
GTCCGAGGCGAAGGAGGAAGCCTATTTGCCGCCACCCCTCGGACGGCCTCGGTGCGGAATGTCACGCGGCTCCACAGCAC
GGCCTGGATAAAATGCGTGC

Downstream 100 bases:

>100_bases
CCCGGCGCGGGCCGGCGCGCGATGAGGAAGGCCTGCGGCGTCCGTTCCGACCCGTCATCCACCGGCTCGCGCAGGAACCG
CGCGCGGACCGGCAGATCCG

Product: isopentenyl-diphosphate delta-isomerase

Products: NA

Alternate protein names: IPP isomerase; IPP:DMAPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MATANHPGPQDMISRPRDSHRSGGAAVKAPELVILLSPSGDITGTTPKATVHGPQTPLHLAFSSYVFDDMDRILVTRRAL
EKPTWPGVLTNTCCGHPAPGEDFREAISRRLQEELGLQVQRIDLALPAFRYRCVMDDGMVENEICPVFFTRASGPFRINP
DEVAEAFWLPWSKFVDDVTSGALAISPWCRLQVEQLRKLGPSPRHWPSAPDDQLPPAARQNRADYAG

Sequences:

>Translated_227_residues
MATANHPGPQDMISRPRDSHRSGGAAVKAPELVILLSPSGDITGTTPKATVHGPQTPLHLAFSSYVFDDMDRILVTRRAL
EKPTWPGVLTNTCCGHPAPGEDFREAISRRLQEELGLQVQRIDLALPAFRYRCVMDDGMVENEICPVFFTRASGPFRINP
DEVAEAFWLPWSKFVDDVTSGALAISPWCRLQVEQLRKLGPSPRHWPSAPDDQLPPAARQNRADYAG
>Mature_226_residues
ATANHPGPQDMISRPRDSHRSGGAAVKAPELVILLSPSGDITGTTPKATVHGPQTPLHLAFSSYVFDDMDRILVTRRALE
KPTWPGVLTNTCCGHPAPGEDFREAISRRLQEELGLQVQRIDLALPAFRYRCVMDDGMVENEICPVFFTRASGPFRINPD
EVAEAFWLPWSKFVDDVTSGALAISPWCRLQVEQLRKLGPSPRHWPSAPDDQLPPAARQNRADYAG

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1443

COG function: function code I; Isopentenyldiphosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI15147242, Length=204, Percent_Identity=25.9803921568627, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI40018633, Length=181, Percent_Identity=27.0718232044199, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1789255, Length=162, Percent_Identity=44.4444444444444, Blast_Score=142, Evalue=3e-35,
Organism=Drosophila melanogaster, GI281362205, Length=190, Percent_Identity=30.5263157894737, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24648688, Length=190, Percent_Identity=30.5263157894737, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011876
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 25091; Mature: 24960

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATANHPGPQDMISRPRDSHRSGGAAVKAPELVILLSPSGDITGTTPKATVHGPQTPLHL
CCCCCCCCHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCEECCCCCCHHH
AFSSYVFDDMDRILVTRRALEKPTWPGVLTNTCCGHPAPGEDFREAISRRLQEELGLQVQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
RIDLALPAFRYRCVMDDGMVENEICPVFFTRASGPFRINPDEVAEAFWLPWSKFVDDVTS
EHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCEEECHHHHHHHHHCCHHHHHHHHHC
GALAISPWCRLQVEQLRKLGPSPRHWPSAPDDQLPPAARQNRADYAG
CCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
ATANHPGPQDMISRPRDSHRSGGAAVKAPELVILLSPSGDITGTTPKATVHGPQTPLHL
CCCCCCCHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCEECCCCCCHHH
AFSSYVFDDMDRILVTRRALEKPTWPGVLTNTCCGHPAPGEDFREAISRRLQEELGLQVQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEE
RIDLALPAFRYRCVMDDGMVENEICPVFFTRASGPFRINPDEVAEAFWLPWSKFVDDVTS
EHHHHHHHHHEEEECCCCCCCCCCCCEEEECCCCCEEECHHHHHHHHHCCHHHHHHHHHC
GALAISPWCRLQVEQLRKLGPSPRHWPSAPDDQLPPAARQNRADYAG
CCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA