| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317317
Identifier: 158317317
GI number: 158317317
Start: 6746397
End: 6747200
Strand: Direct
Name: 158317317
Synonym: Franean1_5566
Alternate gene names: NA
Gene position: 6746397-6747200 (Clockwise)
Preceding gene: 158317314
Following gene: 158317320
Centisome position: 75.11
GC content: 75.12
Gene sequence:
>804_bases ATGAACGACGCCTGGCCCCGTCGGTACGCGGACGAGGTTCTCGGCGGCGCGGCGGACGGCGAACGGCGCCGGCTCGCCGC CATGGCCGCGGTGTGCGACCCGGTGACGACCCACCTCCTCGACGAGCTCGGCGTCGCCGCCGGGTGGCGATGCCTCGAGG TGGGCGCCGGCGCGGGGTCGGTGGCGGCCTGGCTGGCCGACCGCGTCACCGCCGCCGGCCAGGTCACCGCGACCGACATC GACCTCAGCCACCTGGCCGGCCTCAGCGCGCCCGGCCTGTCCGTCCTGCGCCACGACGTGACCCGCGACCCGGCGCCGCC CGGCGCGCCGTTCGACCTCGTGCACGCCCGCTTCGTGCTCGAACACCTTCCCGAGCGCGAACAGGTCCTCGACCGGCTGG TGTCCTGGCTGCGGCCGGGCGGCACGATCGTCGTCGAGTCGATCGCGAGCTTCCCGGTGGCCTCCTCCCCCAACCCGACG TTCCGCCAGGCGATGACCGCCATCGAACAGGTCCTCGCGCGGACGATCGGCACGGACTCGACGTGGGCGCGCGGGTTCCC CGGCCCGCTGCGCAGCCGGCACCTGGTCGACGTGGGAACCTCCAGCCACCTGCCGACCACCGGCGGGGCGAACGCGTCCG CGTGCTGCTGGGCGCTCACCCTCAGCCGGCTCCGCCCGCACATCCTCAGTCTCGGGCTGGCCACCGCCGACACCGTGGAC CGCGCCCTCGACCTGCTCGCCGACCCGGCCTTCTTCGACCTTTCCTTCGCGACAGCCATCGCCTGGGGCCGCGCACCGGA CTAG
Upstream 100 bases:
>100_bases ATCATTTCCTGTCAGAAATGCGACATGTTCCTGCCACGCGCCATACTTGTCGATCTCACGCGGCGGGGCTCCGCGGTGCC GGGACGGGGAGCTGGACACG
Downstream 100 bases:
>100_bases CCCCCTGCGCCGCCGGCCCGGCGCGGCGGCCTCGCGGCGCGGCGGCCCGGCGCCCGGTCAGTCCTCCGGTGCCGTCATCG CCGGGTTTTCGCGGCGGCCT
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Ribosomal RNA Adenine Methylase Transferase; AMP-Dependent Synthetase And Ligase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNDAWPRRYADEVLGGAADGERRRLAAMAAVCDPVTTHLLDELGVAAGWRCLEVGAGAGSVAAWLADRVTAAGQVTATDI DLSHLAGLSAPGLSVLRHDVTRDPAPPGAPFDLVHARFVLEHLPEREQVLDRLVSWLRPGGTIVVESIASFPVASSPNPT FRQAMTAIEQVLARTIGTDSTWARGFPGPLRSRHLVDVGTSSHLPTTGGANASACCWALTLSRLRPHILSLGLATADTVD RALDLLADPAFFDLSFATAIAWGRAPD
Sequences:
>Translated_267_residues MNDAWPRRYADEVLGGAADGERRRLAAMAAVCDPVTTHLLDELGVAAGWRCLEVGAGAGSVAAWLADRVTAAGQVTATDI DLSHLAGLSAPGLSVLRHDVTRDPAPPGAPFDLVHARFVLEHLPEREQVLDRLVSWLRPGGTIVVESIASFPVASSPNPT FRQAMTAIEQVLARTIGTDSTWARGFPGPLRSRHLVDVGTSSHLPTTGGANASACCWALTLSRLRPHILSLGLATADTVD RALDLLADPAFFDLSFATAIAWGRAPD >Mature_267_residues MNDAWPRRYADEVLGGAADGERRRLAAMAAVCDPVTTHLLDELGVAAGWRCLEVGAGAGSVAAWLADRVTAAGQVTATDI DLSHLAGLSAPGLSVLRHDVTRDPAPPGAPFDLVHARFVLEHLPEREQVLDRLVSWLRPGGTIVVESIASFPVASSPNPT FRQAMTAIEQVLARTIGTDSTWARGFPGPLRSRHLVDVGTSSHLPTTGGANASACCWALTLSRLRPHILSLGLATADTVD RALDLLADPAFFDLSFATAIAWGRAPD
Specific function: Unknown
COG id: COG2226
COG function: function code H; Methylase involved in ubiquinone/menaquinone biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28205; Mature: 28205
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDAWPRRYADEVLGGAADGERRRLAAMAAVCDPVTTHLLDELGVAAGWRCLEVGAGAGS CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHH VAAWLADRVTAAGQVTATDIDLSHLAGLSAPGLSVLRHDVTRDPAPPGAPFDLVHARFVL HHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH EHLPEREQVLDRLVSWLRPGGTIVVESIASFPVASSPNPTFRQAMTAIEQVLARTIGTDS HHCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TWARGFPGPLRSRHLVDVGTSSHLPTTGGANASACCWALTLSRLRPHILSLGLATADTVD CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALDLLADPAFFDLSFATAIAWGRAPD HHHHHHCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNDAWPRRYADEVLGGAADGERRRLAAMAAVCDPVTTHLLDELGVAAGWRCLEVGAGAGS CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHH VAAWLADRVTAAGQVTATDIDLSHLAGLSAPGLSVLRHDVTRDPAPPGAPFDLVHARFVL HHHHHHHHHHHCCCEEEECCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH EHLPEREQVLDRLVSWLRPGGTIVVESIASFPVASSPNPTFRQAMTAIEQVLARTIGTDS HHCCCHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TWARGFPGPLRSRHLVDVGTSSHLPTTGGANASACCWALTLSRLRPHILSLGLATADTVD CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALDLLADPAFFDLSFATAIAWGRAPD HHHHHHCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA