| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is actII-2 [H]
Identifier: 158317306
GI number: 158317306
Start: 6725738
End: 6727390
Strand: Direct
Name: actII-2 [H]
Synonym: Franean1_5554
Alternate gene names: 158317306
Gene position: 6725738-6727390 (Clockwise)
Preceding gene: 158317305
Following gene: 158317307
Centisome position: 74.88
GC content: 70.66
Gene sequence:
>1653_bases ATGACACCCCGGGCAGCCGGGATTCAGAGCCCTGGTGCCGGGCCGGAGGCCGCTTCGGCCGGCCTGGTCGTTCTTCCCAC ACTGGCGGCGGCGCAGTTCCTCATGACCCTGGACAGCTCGGTCATGAACGTGTCGATCGCCACCGTGGCCGCGGACATCG GTACCACGGTGACCGGAATTCAGACCGCCATCACCTTCTACACCCTGGTGATGGCCGCGTTCATGATTACCGGCGGCAGG CTGGGGCAGCTCTTCGGGCATCGGCGTGTGTTCACCATCGGCTGCGTCGTCTACGGCTGTGGGTCGCTGACGACGTCCGT CGCCGGGAATCTCGCCGTGCTCATGTTCGGCTGGTCGTTCCTCGAAGGAATCGGCGCCGCGCTGATCATGCCCGCGGTCG TCGCTCTGGTCGCGTCGAACTTCGCCTCGGCGCAGCGACCGCGCGCCTACGGGCTGGTCGCCGCCGCCGGCGCGATCGCG GTCGCGGCGGGTCCGCTCGTCGGCGGCCTGTTCACCACCTACCTGTCCTGGCGCTGGGTCTTCGCAGGCGAGGTCCTCGT GGTGGCCGTCATCCTGTGGCTGACCCGGGGGATGGCGGACACGCCTCCGACCGCGCAGGGACGTCTCGACATCGTGGGCA CCGTGCTGTCCGCGGCCGGCCTGGCGCTGATCGTGTACGGCGTCCTCCGCTCGGGGAGCTGGGGCCTGGTCCGGCCGGCG CCCGGCGCGCCCGTCTGGTTGGGGCTCTCACCCGTGATCTGGCTGGTCCTCGCGGGCGGAACCATCCTGTTGCTCTTCGT CCGGTGGCAGGATCACCGGCTGGCCCGCGGCGCCGCCGCGCTGCTCGATCCGGTGCTGCTGCGGAACCGGACGTTCCGGG CCGGGCTCACGTCGTTCTTCTTCCAGTATCTGCTCCAGGCGGGGCTCTTCTTCGTGGTACCGCTGTATCTGTCGGTGGCG CTCGGGCTCTCGGCGGTCGCGACCGGCGTGCGTCTGCTGCCGTTGTCCATCGCCCTGCTGGTGGCCGCCGTCGGCATTCC CAAAGCCCTCCCGCACGTCTCACCGCGACGCATCGTCCGTGGTGGTTTCCTCTCCCTGTTCGCCGGGACAACGATCCTGG TCGCCGCGCTTGACGCCGGCGCCGGACCGGAGATCGTGACCTGGCCGATGCTGCTCGCCGGCCTCGGGGTGGGCGCGCTC GCGTCCCAGCTCGGCAGCGTCACCGTGTCCGCGGTCGCCGACGAGCACACCGGCGAGGTCGGTGGGGTGCAGAACACGGT GACAAACCTGGGCGCGTCGATCGGTACCGCGGCAGCTGGGGCAGTTCTCATCTCCGCGCTGACCTCGTCGTTCCTCACCG GCATACGGCACGACCCCGCCGTACCGGCGGAGCTGAGCACGCAGGCCGAGGTGCGCCTGGCCGAGGGCGTCCCCTTCCTG TCCGACCGGGACCTGAAGATCCGGATCGACGAGGCCGGCGTCCCGCCGGACACCGCCAAGGTGATCACCGCCACCAACGC GGACGCCCGCATCGACGGCCTGCGTGCGGCTCTGTCGCTGCTCGCCGCCATCGCCCTGGCCGCGATGTTCCTCACCCGCC AGATCCCGGACCGGCAATCCGCTCCGGTGCCGGTTTCCGGCCGGGTCACCTGA
Upstream 100 bases:
>100_bases CCGCTCACACCAAGGCAGAAATGCGAACCAAAAAGGGAACCGGCGATGCGGCCGGGTGCGGAGATCCTGACGCCACCAGG CGTCGGCCCGGGCGCGAACG
Downstream 100 bases:
>100_bases CCGTTCAGAGCCGACGGCCAGACGTACATCACGGTCACCGAAAGCAGGATTCGGCTGTGGGACATCACCGGCCCTCGTCT GCTGGTTACGGGCCGCCGTG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MTPRAAGIQSPGAGPEAASAGLVVLPTLAAAQFLMTLDSSVMNVSIATVAADIGTTVTGIQTAITFYTLVMAAFMITGGR LGQLFGHRRVFTIGCVVYGCGSLTTSVAGNLAVLMFGWSFLEGIGAALIMPAVVALVASNFASAQRPRAYGLVAAAGAIA VAAGPLVGGLFTTYLSWRWVFAGEVLVVAVILWLTRGMADTPPTAQGRLDIVGTVLSAAGLALIVYGVLRSGSWGLVRPA PGAPVWLGLSPVIWLVLAGGTILLLFVRWQDHRLARGAAALLDPVLLRNRTFRAGLTSFFFQYLLQAGLFFVVPLYLSVA LGLSAVATGVRLLPLSIALLVAAVGIPKALPHVSPRRIVRGGFLSLFAGTTILVAALDAGAGPEIVTWPMLLAGLGVGAL ASQLGSVTVSAVADEHTGEVGGVQNTVTNLGASIGTAAAGAVLISALTSSFLTGIRHDPAVPAELSTQAEVRLAEGVPFL SDRDLKIRIDEAGVPPDTAKVITATNADARIDGLRAALSLLAAIALAAMFLTRQIPDRQSAPVPVSGRVT
Sequences:
>Translated_550_residues MTPRAAGIQSPGAGPEAASAGLVVLPTLAAAQFLMTLDSSVMNVSIATVAADIGTTVTGIQTAITFYTLVMAAFMITGGR LGQLFGHRRVFTIGCVVYGCGSLTTSVAGNLAVLMFGWSFLEGIGAALIMPAVVALVASNFASAQRPRAYGLVAAAGAIA VAAGPLVGGLFTTYLSWRWVFAGEVLVVAVILWLTRGMADTPPTAQGRLDIVGTVLSAAGLALIVYGVLRSGSWGLVRPA PGAPVWLGLSPVIWLVLAGGTILLLFVRWQDHRLARGAAALLDPVLLRNRTFRAGLTSFFFQYLLQAGLFFVVPLYLSVA LGLSAVATGVRLLPLSIALLVAAVGIPKALPHVSPRRIVRGGFLSLFAGTTILVAALDAGAGPEIVTWPMLLAGLGVGAL ASQLGSVTVSAVADEHTGEVGGVQNTVTNLGASIGTAAAGAVLISALTSSFLTGIRHDPAVPAELSTQAEVRLAEGVPFL SDRDLKIRIDEAGVPPDTAKVITATNADARIDGLRAALSLLAAIALAAMFLTRQIPDRQSAPVPVSGRVT >Mature_549_residues TPRAAGIQSPGAGPEAASAGLVVLPTLAAAQFLMTLDSSVMNVSIATVAADIGTTVTGIQTAITFYTLVMAAFMITGGRL GQLFGHRRVFTIGCVVYGCGSLTTSVAGNLAVLMFGWSFLEGIGAALIMPAVVALVASNFASAQRPRAYGLVAAAGAIAV AAGPLVGGLFTTYLSWRWVFAGEVLVVAVILWLTRGMADTPPTAQGRLDIVGTVLSAAGLALIVYGVLRSGSWGLVRPAP GAPVWLGLSPVIWLVLAGGTILLLFVRWQDHRLARGAAALLDPVLLRNRTFRAGLTSFFFQYLLQAGLFFVVPLYLSVAL GLSAVATGVRLLPLSIALLVAAVGIPKALPHVSPRRIVRGGFLSLFAGTTILVAALDAGAGPEIVTWPMLLAGLGVGALA SQLGSVTVSAVADEHTGEVGGVQNTVTNLGASIGTAAAGAVLISALTSSFLTGIRHDPAVPAELSTQAEVRLAEGVPFLS DRDLKIRIDEAGVPPDTAKVITATNADARIDGLRAALSLLAAIALAAMFLTRQIPDRQSAPVPVSGRVT
Specific function: Promotes the efflux of actinorhodin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1790195, Length=428, Percent_Identity=24.7663551401869, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1788710, Length=419, Percent_Identity=24.582338902148, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1789042, Length=415, Percent_Identity=23.3734939759036, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI87081983, Length=419, Percent_Identity=25.7756563245823, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1788392, Length=416, Percent_Identity=24.0384615384615, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322958, Length=500, Percent_Identity=22.4, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6325455, Length=339, Percent_Identity=25.9587020648968, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 56316; Mature: 56185
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRAAGIQSPGAGPEAASAGLVVLPTLAAAQFLMTLDSSVMNVSIATVAADIGTTVTGI CCCCCCCCCCCCCCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QTAITFYTLVMAAFMITGGRLGQLFGHRRVFTIGCVVYGCGSLTTSVAGNLAVLMFGWSF HHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEHHHHHHCCCHHHHHHHCCHHHHHHHHHH LEGIGAALIMPAVVALVASNFASAQRPRAYGLVAAAGAIAVAAGPLVGGLFTTYLSWRWV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGEVLVVAVILWLTRGMADTPPTAQGRLDIVGTVLSAAGLALIVYGVLRSGSWGLVRPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PGAPVWLGLSPVIWLVLAGGTILLLFVRWQDHRLARGAAALLDPVLLRNRTFRAGLTSFF CCCCEEECHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FQYLLQAGLFFVVPLYLSVALGLSAVATGVRLLPLSIALLVAAVGIPKALPHVSPRRIVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH GGFLSLFAGTTILVAALDAGAGPEIVTWPMLLAGLGVGALASQLGSVTVSAVADEHTGEV HHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCEEHHHHHCCCCCCC GGVQNTVTNLGASIGTAAAGAVLISALTSSFLTGIRHDPAVPAELSTQAEVRLAEGVPFL CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHCCCCCC SDRDLKIRIDEAGVPPDTAKVITATNADARIDGLRAALSLLAAIALAAMFLTRQIPDRQS CCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APVPVSGRVT CCCCCCCCCC >Mature Secondary Structure TPRAAGIQSPGAGPEAASAGLVVLPTLAAAQFLMTLDSSVMNVSIATVAADIGTTVTGI CCCCCCCCCCCCCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QTAITFYTLVMAAFMITGGRLGQLFGHRRVFTIGCVVYGCGSLTTSVAGNLAVLMFGWSF HHHHHHHHHHHHHHHHCCCHHHHHHCCCHHEEHHHHHHCCCHHHHHHHCCHHHHHHHHHH LEGIGAALIMPAVVALVASNFASAQRPRAYGLVAAAGAIAVAAGPLVGGLFTTYLSWRWV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGEVLVVAVILWLTRGMADTPPTAQGRLDIVGTVLSAAGLALIVYGVLRSGSWGLVRPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PGAPVWLGLSPVIWLVLAGGTILLLFVRWQDHRLARGAAALLDPVLLRNRTFRAGLTSFF CCCCEEECHHHHHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FQYLLQAGLFFVVPLYLSVALGLSAVATGVRLLPLSIALLVAAVGIPKALPHVSPRRIVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHH GGFLSLFAGTTILVAALDAGAGPEIVTWPMLLAGLGVGALASQLGSVTVSAVADEHTGEV HHHHHHHHHHHHEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCEEHHHHHCCCCCCC GGVQNTVTNLGASIGTAAAGAVLISALTSSFLTGIRHDPAVPAELSTQAEVRLAEGVPFL CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHCCCCCC SDRDLKIRIDEAGVPPDTAKVITATNADARIDGLRAALSLLAAIALAAMFLTRQIPDRQS CCCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APVPVSGRVT CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1878971; 12000953 [H]