| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317305
Identifier: 158317305
GI number: 158317305
Start: 6724743
End: 6725741
Strand: Direct
Name: 158317305
Synonym: Franean1_5553
Alternate gene names: NA
Gene position: 6724743-6725741 (Clockwise)
Preceding gene: 158317304
Following gene: 158317306
Centisome position: 74.87
GC content: 65.07
Gene sequence:
>999_bases ATGCCCGGGAGCCGACGCGCGCCCGGTGATCGGCGCACATCTCAGCCATCCGGCGGATCCACCGGCTCCGTCGCGGACCG GCTGCGGCGACGGTTCGGACATCTGGCGGAAAAGGCCCGGCTGATCCGGGCACGGCTCCGGAACGCCGCGGTGGAGGATC TGACATCCAGATTGCGGCAGGGCGATCTTATCAACAGTTCGATGAGTCTCGCCGCACTCATTCTGATGATGTTCTTCCCC TTTATTATCGCGTTGGCCGCGTTGTCGCCGCTGCGCCCCGGAGGCGCGGCAGAAATAATCATCAGGCGGATGGGCCTGAA CCAGGATGCCGCGGAGGCCGTCGAACGACTGTTCACGCCGCAGGACGAAACGGTCCACAACGGCTGGACGGTGGTGGGCG CGCTCTGGCTGATTCTCGGCGGCCTTACCCTGGCCGCGACCGTGCAGTCCGTGTATGTCCAGGTTTTCAGGGTCCAGCCG CTCGGGCTTCGGGGCATCCCGGCCCAGGTCGTCTGGCTCTGCGAGCTCATTGTCTTTCTCGCCGGCGCCACCGGTGCCGG GGCGCTAATCACCAGCACCACTACCGGCCAGATCTGCTACGGCCTGCTCAGTACCACGGGTCTGCTGTTCCTTCTCTGGA TCGGCATCAGGGTCCTCACCCTCGGACGGATCGGGTGGCGCGAGGCCTGGCCGGCCGCCGCGTTCACGACGGTCGGGCTG ACCGGTCTTGGCGTGGTGAGCAGGTTTACTTTCTCCGCGTCCATCGTCACGAACGAGCGGAACTACGGGAGCATCGGCGT CGTTTTCACGATCCTTTCCTGGCTGATCGGGTTTGGCGTTGTTCTCACCGGAGGGGCGATCGTCGGAATGTGGTACAACG AGACGCGCAAAGCAGCCGCTCACACCAAGGCAGAAATGCGAACCAAAAAGGGAACCGGCGATGCGGCCGGGTGCGGAGAT CCTGACGCCACCAGGCGTCGGCCCGGGCGCGAACGATGA
Upstream 100 bases:
>100_bases CCCCGGAGATGCGAGGACGCTCGCGCGCCGGGATGCTGAGGTGCACGGCCCGGTCGGCGGCCAGCCGGACGGGCGGGAAT ACCGCGGTCGGAGGGGAGTT
Downstream 100 bases:
>100_bases CACCCCGGGCAGCCGGGATTCAGAGCCCTGGTGCCGGGCCGGAGGCCGCTTCGGCCGGCCTGGTCGTTCTTCCCACACTG GCGGCGGCGCAGTTCCTCAT
Product: ribonuclease BN
Products: NA
Alternate protein names: Ribonuclease BN
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MPGSRRAPGDRRTSQPSGGSTGSVADRLRRRFGHLAEKARLIRARLRNAAVEDLTSRLRQGDLINSSMSLAALILMMFFP FIIALAALSPLRPGGAAEIIIRRMGLNQDAAEAVERLFTPQDETVHNGWTVVGALWLILGGLTLAATVQSVYVQVFRVQP LGLRGIPAQVVWLCELIVFLAGATGAGALITSTTTGQICYGLLSTTGLLFLLWIGIRVLTLGRIGWREAWPAAAFTTVGL TGLGVVSRFTFSASIVTNERNYGSIGVVFTILSWLIGFGVVLTGGAIVGMWYNETRKAAAHTKAEMRTKKGTGDAAGCGD PDATRRRPGRER
Sequences:
>Translated_332_residues MPGSRRAPGDRRTSQPSGGSTGSVADRLRRRFGHLAEKARLIRARLRNAAVEDLTSRLRQGDLINSSMSLAALILMMFFP FIIALAALSPLRPGGAAEIIIRRMGLNQDAAEAVERLFTPQDETVHNGWTVVGALWLILGGLTLAATVQSVYVQVFRVQP LGLRGIPAQVVWLCELIVFLAGATGAGALITSTTTGQICYGLLSTTGLLFLLWIGIRVLTLGRIGWREAWPAAAFTTVGL TGLGVVSRFTFSASIVTNERNYGSIGVVFTILSWLIGFGVVLTGGAIVGMWYNETRKAAAHTKAEMRTKKGTGDAAGCGD PDATRRRPGRER >Mature_331_residues PGSRRAPGDRRTSQPSGGSTGSVADRLRRRFGHLAEKARLIRARLRNAAVEDLTSRLRQGDLINSSMSLAALILMMFFPF IIALAALSPLRPGGAAEIIIRRMGLNQDAAEAVERLFTPQDETVHNGWTVVGALWLILGGLTLAATVQSVYVQVFRVQPL GLRGIPAQVVWLCELIVFLAGATGAGALITSTTTGQICYGLLSTTGLLFLLWIGIRVLTLGRIGWREAWPAAAFTTVGLT GLGVVSRFTFSASIVTNERNYGSIGVVFTILSWLIGFGVVLTGGAIVGMWYNETRKAAAHTKAEMRTKKGTGDAAGCGDP DATRRRPGRER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35605; Mature: 35474
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGSRRAPGDRRTSQPSGGSTGSVADRLRRRFGHLAEKARLIRARLRNAAVEDLTSRLRQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDLINSSMSLAALILMMFFPFIIALAALSPLRPGGAAEIIIRRMGLNQDAAEAVERLFTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCC QDETVHNGWTVVGALWLILGGLTLAATVQSVYVQVFRVQPLGLRGIPAQVVWLCELIVFL CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AGATGAGALITSTTTGQICYGLLSTTGLLFLLWIGIRVLTLGRIGWREAWPAAAFTTVGL HCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHH TGLGVVSRFTFSASIVTNERNYGSIGVVFTILSWLIGFGVVLTGGAIVGMWYNETRKAAA HHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHH HTKAEMRTKKGTGDAAGCGDPDATRRRPGRER HHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCC >Mature Secondary Structure PGSRRAPGDRRTSQPSGGSTGSVADRLRRRFGHLAEKARLIRARLRNAAVEDLTSRLRQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDLINSSMSLAALILMMFFPFIIALAALSPLRPGGAAEIIIRRMGLNQDAAEAVERLFTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCC QDETVHNGWTVVGALWLILGGLTLAATVQSVYVQVFRVQPLGLRGIPAQVVWLCELIVFL CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AGATGAGALITSTTTGQICYGLLSTTGLLFLLWIGIRVLTLGRIGWREAWPAAAFTTVGL HCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHH TGLGVVSRFTFSASIVTNERNYGSIGVVFTILSWLIGFGVVLTGGAIVGMWYNETRKAAA HHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHH HTKAEMRTKKGTGDAAGCGDPDATRRRPGRER HHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA