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The map label for this gene is int [H]

Identifier: 158317286

GI number: 158317286

Start: 6703155

End: 6704435

Strand: Reverse

Name: int [H]

Synonym: Franean1_5534

Alternate gene names: 158317286

Gene position: 6704435-6703155 (Counterclockwise)

Preceding gene: 158317287

Following gene: 158317280

Centisome position: 74.64

GC content: 70.96

Gene sequence:

>1281_bases
ATGGCCGCGCGCAAGGGGCGGCGGGGCGCCGGTGAGGGCGCGATCTACAAGGACAGCTCCGGCCGCTGGCGGGCGACCGT
AGACCTCGGCTGGAAGGACGGAAAGCGGCAGCGGAAGTACCTCTCGGGCAAGACCCGGACGGAGGTCGCGGAGAAGCTGC
GGGCGCTGCGTCGGGAGCAGGAAGACGGCGTGGCTGTGGTCACCGGGGTCAAGCTGCTCACTTTGGAAGAGTGGCTCACG
TTCTGGCTGGACACGATCGCGGCGAGGAAGGTGCGGCCGTCGACGTTGGCGACCTACCGGGGATACGTGCGGAACCGGAT
CGTCCCGGCACTCGGCGCGGTTCGGCTCGACCGGCTGACCCCGGAGCATCTCGAAGCCTTCTACCACCGGTGCGAGAAGG
AAGGACTGGCGGCGGCCACGGTGCTCCAGATGCACCGGATCGTCTCCCGGGCGCTGAAGGTCGCGCACCGGCGGGGGCGG
GTTGCCCGGAACGTGGCGACGCTGGTTGATCCTCCCTCCGTCGACCGTGACGAGATCCGGCCGCTCACGGCATCGGACGC
GCGGGCCGTCCTCGACGCGGCGAAGGGACAGCGCAACTCGGCCCGCTGGTCGGTCGCCCTTGCGCTCGGACTCAGGCAGG
GTGAGGCTCTGGGGCTGGCGTGGGACGCGGTGAAGCTGGATGCGGCCCCGGCCACGCTGACGGTCCGGCAGGCGCTGCAA
CGGCGGCGCTGGGAGCACGGCTGTACCGACCCGAAGACCTGCGGCACCGCGCGCCGATGCCCTCGTCGCACCGGCGGTGG
CCTGGTGATCGTGCGCCCGAAGAGCCGCGCGGGCCGGCGGACGATCGTCATCCCCGAGAACCTGGCGGCAAGCCTGCGGG
CTCACCGTTCCGCACAGCGCGCCGAGCGCCAGGCGGCCGATGGCGAGTGGGTCAACGAACACGAGCTGGTGTTCGTCCAG
CCGAACGGGCGTCCACTCGACCCGCGGGCGGACCACCGGGCCTGGCAGGACCTGCTGTCACAGGCCGGGGTGCGCGCGGC
CCGGCTGCATGATGCCCGGCACACGATGGCAAGCCTGCTGCTCGCGCAGAAGGTCCACCCGCGGGTGGTCATGGAGATCA
TGGGGCACTCGCAGATCAGCCTGACCCTCGGCACCTACAGCCACGTCGCACCGGAGCTGTCGACGGACGCGGCGGACCGG
ATGGGCTCCGCTCTATGGGGGGAGACAACCCCGGCCACGGACGGTGAAGAAGGCCGAAACCAGGAAAACGAGAAAGGCTG
A

Upstream 100 bases:

>100_bases
GTGAGTCCAAGTTCGCCTGCGACATGGGCGACAGCCGCTACGGCTGCCCCTGGTGCGACAACATCGAATGGCCCGACGGC
AACCCGCTGGACGCTGCCTG

Downstream 100 bases:

>100_bases
TGTGCGGCGCACCTGTGGCTGCCAGCGTGGCTGCCACAATGAAAACAGCGGCCCCACCCAAAGGGGTGAAACCGCTGGTA
GATACGGGTGCGCCGCCAGG

Product: integrase family protein

Products: NA

Alternate protein names: Recombinase [H]

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MAARKGRRGAGEGAIYKDSSGRWRATVDLGWKDGKRQRKYLSGKTRTEVAEKLRALRREQEDGVAVVTGVKLLTLEEWLT
FWLDTIAARKVRPSTLATYRGYVRNRIVPALGAVRLDRLTPEHLEAFYHRCEKEGLAAATVLQMHRIVSRALKVAHRRGR
VARNVATLVDPPSVDRDEIRPLTASDARAVLDAAKGQRNSARWSVALALGLRQGEALGLAWDAVKLDAAPATLTVRQALQ
RRRWEHGCTDPKTCGTARRCPRRTGGGLVIVRPKSRAGRRTIVIPENLAASLRAHRSAQRAERQAADGEWVNEHELVFVQ
PNGRPLDPRADHRAWQDLLSQAGVRAARLHDARHTMASLLLAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAADR
MGSALWGETTPATDGEEGRNQENEKG

Sequences:

>Translated_426_residues
MAARKGRRGAGEGAIYKDSSGRWRATVDLGWKDGKRQRKYLSGKTRTEVAEKLRALRREQEDGVAVVTGVKLLTLEEWLT
FWLDTIAARKVRPSTLATYRGYVRNRIVPALGAVRLDRLTPEHLEAFYHRCEKEGLAAATVLQMHRIVSRALKVAHRRGR
VARNVATLVDPPSVDRDEIRPLTASDARAVLDAAKGQRNSARWSVALALGLRQGEALGLAWDAVKLDAAPATLTVRQALQ
RRRWEHGCTDPKTCGTARRCPRRTGGGLVIVRPKSRAGRRTIVIPENLAASLRAHRSAQRAERQAADGEWVNEHELVFVQ
PNGRPLDPRADHRAWQDLLSQAGVRAARLHDARHTMASLLLAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAADR
MGSALWGETTPATDGEEGRNQENEKG
>Mature_425_residues
AARKGRRGAGEGAIYKDSSGRWRATVDLGWKDGKRQRKYLSGKTRTEVAEKLRALRREQEDGVAVVTGVKLLTLEEWLTF
WLDTIAARKVRPSTLATYRGYVRNRIVPALGAVRLDRLTPEHLEAFYHRCEKEGLAAATVLQMHRIVSRALKVAHRRGRV
ARNVATLVDPPSVDRDEIRPLTASDARAVLDAAKGQRNSARWSVALALGLRQGEALGLAWDAVKLDAAPATLTVRQALQR
RRWEHGCTDPKTCGTARRCPRRTGGGLVIVRPKSRAGRRTIVIPENLAASLRAHRSAQRAERQAADGEWVNEHELVFVQP
NGRPLDPRADHRAWQDLLSQAGVRAARLHDARHTMASLLLAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAADRM
GSALWGETTPATDGEEGRNQENEKG

Specific function: Is a recombinase (or integrase), catalyzing the cutting and rejoining of the recombining DNA molecules [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 47200; Mature: 47069

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARKGRRGAGEGAIYKDSSGRWRATVDLGWKDGKRQRKYLSGKTRTEVAEKLRALRREQ
CCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHC
EDGVAVVTGVKLLTLEEWLTFWLDTIAARKVRPSTLATYRGYVRNRIVPALGAVRLDRLT
CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEHLEAFYHRCEKEGLAAATVLQMHRIVSRALKVAHRRGRVARNVATLVDPPSVDRDEIR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PLTASDARAVLDAAKGQRNSARWSVALALGLRQGEALGLAWDAVKLDAAPATLTVRQALQ
CCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEHEEECCCCHHHHHHHHHH
RRRWEHGCTDPKTCGTARRCPRRTGGGLVIVRPKSRAGRRTIVIPENLAASLRAHRSAQR
HHHHHCCCCCCHHCCHHHHCCCCCCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHH
AERQAADGEWVNEHELVFVQPNGRPLDPRADHRAWQDLLSQAGVRAARLHDARHTMASLL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAADRMGSALWGETTPATDGEEGRN
HHHHCCHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
QENEKG
CCCCCC
>Mature Secondary Structure 
AARKGRRGAGEGAIYKDSSGRWRATVDLGWKDGKRQRKYLSGKTRTEVAEKLRALRREQ
CCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHC
EDGVAVVTGVKLLTLEEWLTFWLDTIAARKVRPSTLATYRGYVRNRIVPALGAVRLDRLT
CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEHLEAFYHRCEKEGLAAATVLQMHRIVSRALKVAHRRGRVARNVATLVDPPSVDRDEIR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PLTASDARAVLDAAKGQRNSARWSVALALGLRQGEALGLAWDAVKLDAAPATLTVRQALQ
CCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEEHEEECCCCHHHHHHHHHH
RRRWEHGCTDPKTCGTARRCPRRTGGGLVIVRPKSRAGRRTIVIPENLAASLRAHRSAQR
HHHHHCCCCCCHHCCHHHHCCCCCCCCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHH
AERQAADGEWVNEHELVFVQPNGRPLDPRADHRAWQDLLSQAGVRAARLHDARHTMASLL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LAQKVHPRVVMEIMGHSQISLTLGTYSHVAPELSTDAADRMGSALWGETTPATDGEEGRN
HHHHCCHHHHHHHHCCCEEEEEECCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
QENEKG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2180909 [H]