| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317267
Identifier: 158317267
GI number: 158317267
Start: 6682388
End: 6683536
Strand: Direct
Name: 158317267
Synonym: Franean1_5515
Alternate gene names: NA
Gene position: 6682388-6683536 (Clockwise)
Preceding gene: 158317265
Following gene: 158317268
Centisome position: 74.4
GC content: 74.24
Gene sequence:
>1149_bases GTGGGTGATCTCGAGGCGACCTTCCGGGAGCGCTGGGACGACCCGTCCGCGCTGGACAACCCCAACCCGATCCGGCAGAT CTTCTATCGGATACGCCCGGTCGAGACCAATCCGGACGGGCTCCCGCCACAGGCACCCGACCCGGCCCCGGTCGGCCCGC ACGCCGTCCAGATCCTGCGCACCTACCCGCGCAGGCGCCCGCACTACCCGTTCGCGCGCAAGGGCGAGCAGTCCATCGCG CGCGCCTACCGCAAGGTGCTGCGCCGCGCCCGGCGGCTGATCTACCTGGAGGACCAGTACATGTGGTCCACCGAGGTCGC CCGGCTGTTCGCGTACGCGCTGCGCCGCGAGCCCGAGCTCCACCTGGTGATCGTCGTCCCGCGTTTCCCGACCCAGGGCG GGCGTTTCTCGCTGCCGCCCAACCTTGTCGGGCGCGAGAAGGCCCTGGAGATCTGCCGCGCGGCCGGCGGTGACCGCGTC GCCGTCTACGACGTCGAGAACCACGCCGGGACGCCCGTCTACGTCCACTCGAAGGCCGTGACGATCGACGACGTCTGGGC CTCGATCGGCTCGGACAACCTCAACCGGCGGTCCTGGAGCCACGATTCGGAGCTCGCCGTCGCCACCATCGACACCACCC TCGACCCGCGCGAGCCACACGACCCCGGCGGCCTCGGCGACGGCGCCCGCGTATTCGCCCGCGACCTGCGCCTCGAGCTC TGGCGCGAGCACCTCGACTGGGACGGCGGCGGCGAGGAGCTCATCGACCCCGAAGCCGGGTTTCAAGGCGTTCCGGCGGC GCGCCGACGAGCTCGACGCCTGGCACCGCGGCGGCCGGGCCGCGCCCGCCGGGCCGGATCCGGCCGCACCGGCCGCAACG CCTCGGCCGGCTCACCCGCGGCTGGTCCGCGCCGCTCTACCATGCCATCTACGACCCGGACGGCCGTCCCCGCCGGATGC GCCGCGACAACGCCTGGTGATCCCCCGCTCCCGGAAGTGGCATGCGGGCGCGCCGCGTGGGAGGAAGGGCCGCGCGGCCG GGCGGGCGTAACACCAGCAAGCCCGCGCGGGCGCCGACTCCGGCAACGGCCGCTCATGACCCCGCGGGTCCCGGTGGGAC ATCCGGCGCGGGCCGCACCCGGTGCCTAG
Upstream 100 bases:
>100_bases TTCGTCGTGCAAACGCCGGCCGGCTCGTGGGCCGCGGGCTCGTCCCGACGGTGCCGCCCCGCCCTGGCACGACATCCAGG CCGAGGTACGCGGGCCGGCC
Downstream 100 bases:
>100_bases CCGTCCCGCGACGGTGCAGCACGATGTCCCCGGGGCACATCCGGAACCGTGAGAACGAGGCCACAGGCGGATCGGACGGC TCCCGGGCCTCGGCGCCCGT
Product: phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein
Products: NA
Alternate protein names: Phospholipase D; Phospholipase D Family Protein
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MGDLEATFRERWDDPSALDNPNPIRQIFYRIRPVETNPDGLPPQAPDPAPVGPHAVQILRTYPRRRPHYPFARKGEQSIA RAYRKVLRRARRLIYLEDQYMWSTEVARLFAYALRREPELHLVIVVPRFPTQGGRFSLPPNLVGREKALEICRAAGGDRV AVYDVENHAGTPVYVHSKAVTIDDVWASIGSDNLNRRSWSHDSELAVATIDTTLDPREPHDPGGLGDGARVFARDLRLEL WREHLDWDGGGEELIDPEAGFQGVPAARRRARRLAPRRPGRARRAGSGRTGRNASAGSPAAGPRRSTMPSTTRTAVPAGC AATTPGDPPLPEVACGRAAWEEGPRGRAGVTPASPRGRRLRQRPLMTPRVPVGHPARAAPGA
Sequences:
>Translated_382_residues MGDLEATFRERWDDPSALDNPNPIRQIFYRIRPVETNPDGLPPQAPDPAPVGPHAVQILRTYPRRRPHYPFARKGEQSIA RAYRKVLRRARRLIYLEDQYMWSTEVARLFAYALRREPELHLVIVVPRFPTQGGRFSLPPNLVGREKALEICRAAGGDRV AVYDVENHAGTPVYVHSKAVTIDDVWASIGSDNLNRRSWSHDSELAVATIDTTLDPREPHDPGGLGDGARVFARDLRLEL WREHLDWDGGGEELIDPEAGFQGVPAARRRARRLAPRRPGRARRAGSGRTGRNASAGSPAAGPRRSTMPSTTRTAVPAGC AATTPGDPPLPEVACGRAAWEEGPRGRAGVTPASPRGRRLRQRPLMTPRVPVGHPARAAPGA >Mature_381_residues GDLEATFRERWDDPSALDNPNPIRQIFYRIRPVETNPDGLPPQAPDPAPVGPHAVQILRTYPRRRPHYPFARKGEQSIAR AYRKVLRRARRLIYLEDQYMWSTEVARLFAYALRREPELHLVIVVPRFPTQGGRFSLPPNLVGREKALEICRAAGGDRVA VYDVENHAGTPVYVHSKAVTIDDVWASIGSDNLNRRSWSHDSELAVATIDTTLDPREPHDPGGLGDGARVFARDLRLELW REHLDWDGGGEELIDPEAGFQGVPAARRRARRLAPRRPGRARRAGSGRTGRNASAGSPAAGPRRSTMPSTTRTAVPAGCA ATTPGDPPLPEVACGRAAWEEGPRGRAGVTPASPRGRRLRQRPLMTPRVPVGHPARAAPGA
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42097; Mature: 41966
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDLEATFRERWDDPSALDNPNPIRQIFYRIRPVETNPDGLPPQAPDPAPVGPHAVQILR CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TYPRRRPHYPFARKGEQSIARAYRKVLRRARRLIYLEDQYMWSTEVARLFAYALRREPEL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCE HLVIVVPRFPTQGGRFSLPPNLVGREKALEICRAAGGDRVAVYDVENHAGTPVYVHSKAV EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCEE TIDDVWASIGSDNLNRRSWSHDSELAVATIDTTLDPREPHDPGGLGDGARVFARDLRLEL EHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH WREHLDWDGGGEELIDPEAGFQGVPAARRRARRLAPRRPGRARRAGSGRTGRNASAGSPA HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC AGPRRSTMPSTTRTAVPAGCAATTPGDPPLPEVACGRAAWEEGPRGRAGVTPASPRGRRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCCCCCCCCCHHHH RQRPLMTPRVPVGHPARAAPGA HHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GDLEATFRERWDDPSALDNPNPIRQIFYRIRPVETNPDGLPPQAPDPAPVGPHAVQILR CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TYPRRRPHYPFARKGEQSIARAYRKVLRRARRLIYLEDQYMWSTEVARLFAYALRREPEL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCE HLVIVVPRFPTQGGRFSLPPNLVGREKALEICRAAGGDRVAVYDVENHAGTPVYVHSKAV EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCEE TIDDVWASIGSDNLNRRSWSHDSELAVATIDTTLDPREPHDPGGLGDGARVFARDLRLEL EHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH WREHLDWDGGGEELIDPEAGFQGVPAARRRARRLAPRRPGRARRAGSGRTGRNASAGSPA HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC AGPRRSTMPSTTRTAVPAGCAATTPGDPPLPEVACGRAAWEEGPRGRAGVTPASPRGRRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHCCCCCCCCCCCCCCCHHHH RQRPLMTPRVPVGHPARAAPGA HHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA