Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317268

Identifier: 158317268

GI number: 158317268

Start: 6683706

End: 6684398

Strand: Direct

Name: 158317268

Synonym: Franean1_5516

Alternate gene names: NA

Gene position: 6683706-6684398 (Clockwise)

Preceding gene: 158317267

Following gene: 158317269

Centisome position: 74.41

GC content: 73.74

Gene sequence:

>693_bases
ATGTTCGCGGGCGCCGTCGTCCTGGCCACGATCGCGCTGACAGCCGGGCGGCACGAACGGCACGATCCAAGGATCGTGCT
CTGGGGTGACTCGCTCGCCTGGGAGGCGCGCGACTCCTTCACCGCGGCCGCCGGGAAGGACGGGGTCACCAGGACGACCA
CGCGGACCTGGGGCGGCACGGCGCTGTGCGACTGGTTCACCGACATGCGCAACCAGGCCCGGCGCTGGGATCCCACGGTG
GCGGTCCTGTCCTTCTCCGGCAACACCGCCTCGGAGTGCATGCACGGCCGGGATCTGATCACCGCCTACCGGGAGGACGC
CACCAAGGCCGTCGACATCCTGACCCGCCGGGGCATCGACGTCGTCCTCGTGGACGCTCCGCCGCGCAACGACCAGCCCG
TCGGGCCGGACGGCCTCACCGAGCTCGACCGGGTCTGGCGCGAGGTCGCCGCCGGGAACTCCCGCGTCCGGGTGGTACCG
GCCGGGGAGGTCCTCACCGACCAGGGACGGTTCGTCCCGAAGCTCCCGTGCCTGCCCGGCGAGCCCTGCGACCCTGATGG
CAAGGTGGCCGTCCGCAGCCCGGACGGCGTCCACTTCTGCCCGGTCGTCCAACCCGCGATGACGGCGTGCCCGGTCCGGT
CCCCCGGCGCGGAACGCTACGGGCGCGCCCTGGCCGAGGCCGCCCGCCCCTGA

Upstream 100 bases:

>100_bases
GATCGGACGGCTCCCGGGCCTCGGCGCCCGTGCCGTCCCATTCCGGCACCCGTCGGGAGGAGCTGCGCTGACCACGCCAC
GTCTGGGCGTCATCGGCTGG

Downstream 100 bases:

>100_bases
CCCGACCGCCGGCACCGCCTCCCGGTCGAGAAGCCGCCGCCGCGGATGCTTGTCCGCGGGCACGTCGGCCGGGACCCGCC
CGACGACAGCGGACCACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MFAGAVVLATIALTAGRHERHDPRIVLWGDSLAWEARDSFTAAAGKDGVTRTTTRTWGGTALCDWFTDMRNQARRWDPTV
AVLSFSGNTASECMHGRDLITAYREDATKAVDILTRRGIDVVLVDAPPRNDQPVGPDGLTELDRVWREVAAGNSRVRVVP
AGEVLTDQGRFVPKLPCLPGEPCDPDGKVAVRSPDGVHFCPVVQPAMTACPVRSPGAERYGRALAEAARP

Sequences:

>Translated_230_residues
MFAGAVVLATIALTAGRHERHDPRIVLWGDSLAWEARDSFTAAAGKDGVTRTTTRTWGGTALCDWFTDMRNQARRWDPTV
AVLSFSGNTASECMHGRDLITAYREDATKAVDILTRRGIDVVLVDAPPRNDQPVGPDGLTELDRVWREVAAGNSRVRVVP
AGEVLTDQGRFVPKLPCLPGEPCDPDGKVAVRSPDGVHFCPVVQPAMTACPVRSPGAERYGRALAEAARP
>Mature_230_residues
MFAGAVVLATIALTAGRHERHDPRIVLWGDSLAWEARDSFTAAAGKDGVTRTTTRTWGGTALCDWFTDMRNQARRWDPTV
AVLSFSGNTASECMHGRDLITAYREDATKAVDILTRRGIDVVLVDAPPRNDQPVGPDGLTELDRVWREVAAGNSRVRVVP
AGEVLTDQGRFVPKLPCLPGEPCDPDGKVAVRSPDGVHFCPVVQPAMTACPVRSPGAERYGRALAEAARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24854; Mature: 24854

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAGAVVLATIALTAGRHERHDPRIVLWGDSLAWEARDSFTAAAGKDGVTRTTTRTWGGT
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCEECCCCCH
ALCDWFTDMRNQARRWDPTVAVLSFSGNTASECMHGRDLITAYREDATKAVDILTRRGID
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCE
VVLVDAPPRNDQPVGPDGLTELDRVWREVAAGNSRVRVVPAGEVLTDQGRFVPKLPCLPG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCCCCC
EPCDPDGKVAVRSPDGVHFCPVVQPAMTACPVRSPGAERYGRALAEAARP
CCCCCCCCEEEECCCCCEECCCCCHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFAGAVVLATIALTAGRHERHDPRIVLWGDSLAWEARDSFTAAAGKDGVTRTTTRTWGGT
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCEECCCCCH
ALCDWFTDMRNQARRWDPTVAVLSFSGNTASECMHGRDLITAYREDATKAVDILTRRGID
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCE
VVLVDAPPRNDQPVGPDGLTELDRVWREVAAGNSRVRVVPAGEVLTDQGRFVPKLPCLPG
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCCCCC
EPCDPDGKVAVRSPDGVHFCPVVQPAMTACPVRSPGAERYGRALAEAARP
CCCCCCCCEEEECCCCCEECCCCCHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA