| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317219
Identifier: 158317219
GI number: 158317219
Start: 6612272
End: 6612706
Strand: Direct
Name: 158317219
Synonym: Franean1_5466
Alternate gene names: NA
Gene position: 6612272-6612706 (Clockwise)
Preceding gene: 158317217
Following gene: 158317220
Centisome position: 73.62
GC content: 65.98
Gene sequence:
>435_bases ATGACCCAGGTAGGCGAGCCCGTCGGGCAGATCACCGCGGACGACTACGTGTCGATCGAGGACTCGAACGGAGTCGCGCC AACCAACATCATCAGAGTCGGCGATCCGTTCACCGTGTGGATCGACTTCGACCTTGCCGGCGCCCTCAACGGGCTCCTCG TCGGAATTCTGCGCTATTCGGTCCGGTACTGGGTGAACGGGCTGGGGAGCCCCGCCCCGGCGAACCCGATCCCGTCGCGG GTCGAGTCGACGACCCACGGCCAGCTCGGCTACCGCCGCGCCGACACCGAGCGCACGGTGCCTGCCAACACGCTGGCGGC CGGGGTCTACCAGCTCGGCGCCATCGTCACGTTCAGGCTGAACAACAACGGGAACCTGCTCCACTACCCGCTCACCGTCT TCACCCTGCCCAAGATCATCGAGATCTACGCCTAG
Upstream 100 bases:
>100_bases AGCCACCCGAGCAAGATCGTTAATCGCCCGCGGGTAGACAGGATCCGAACCCGGAATTCGTTGCCGTCAACAGCGGCCAC ATCTCAGGAGGAACCAGCGA
Downstream 100 bases:
>100_bases GAGGTCACCGGGCGCGCCGGGCGCCCACCCCGCTCCGACGGAGGCCGCGCGCCCCGTGCCGGTGGCGCGCGGCCTCCCCG TCCCGGGGATCCCATTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTQVGEPVGQITADDYVSIEDSNGVAPTNIIRVGDPFTVWIDFDLAGALNGLLVGILRYSVRYWVNGLGSPAPANPIPSR VESTTHGQLGYRRADTERTVPANTLAAGVYQLGAIVTFRLNNNGNLLHYPLTVFTLPKIIEIYA
Sequences:
>Translated_144_residues MTQVGEPVGQITADDYVSIEDSNGVAPTNIIRVGDPFTVWIDFDLAGALNGLLVGILRYSVRYWVNGLGSPAPANPIPSR VESTTHGQLGYRRADTERTVPANTLAAGVYQLGAIVTFRLNNNGNLLHYPLTVFTLPKIIEIYA >Mature_143_residues TQVGEPVGQITADDYVSIEDSNGVAPTNIIRVGDPFTVWIDFDLAGALNGLLVGILRYSVRYWVNGLGSPAPANPIPSRV ESTTHGQLGYRRADTERTVPANTLAAGVYQLGAIVTFRLNNNGNLLHYPLTVFTLPKIIEIYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15585; Mature: 15454
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVGEPVGQITADDYVSIEDSNGVAPTNIIRVGDPFTVWIDFDLAGALNGLLVGILRYS CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHH VRYWVNGLGSPAPANPIPSRVESTTHGQLGYRRADTERTVPANTLAAGVYQLGAIVTFRL HHHHHHCCCCCCCCCCCCCHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCEEEEEEE NNNGNLLHYPLTVFTLPKIIEIYA CCCCCEEEECHHHHHHHHHHHCCC >Mature Secondary Structure TQVGEPVGQITADDYVSIEDSNGVAPTNIIRVGDPFTVWIDFDLAGALNGLLVGILRYS CCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHHH VRYWVNGLGSPAPANPIPSRVESTTHGQLGYRRADTERTVPANTLAAGVYQLGAIVTFRL HHHHHHCCCCCCCCCCCCCHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCEEEEEEE NNNGNLLHYPLTVFTLPKIIEIYA CCCCCEEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA