| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317168
Identifier: 158317168
GI number: 158317168
Start: 6532995
End: 6533519
Strand: Reverse
Name: 158317168
Synonym: Franean1_5415
Alternate gene names: NA
Gene position: 6533519-6532995 (Counterclockwise)
Preceding gene: 158317170
Following gene: 158317167
Centisome position: 72.74
GC content: 66.86
Gene sequence:
>525_bases ATGGGAGTCCGCCGCGGCGCCGGACAAGAGCTCTTGCCCGCCCGCGGGCGACAGTGTTCGGGCGACGCCTACCCCATGCT CGACAGCAAGGCCGCAACGCTCCTGCATTCGCTCGCCCGCAACCATGCCCTCGTCGACGGGAACGAGCGACTCGCTCTCG CCGGCCTGATCGCCTTCTACGGCATCAACGGCCACCGTCTGACGCTGACCAACAATGACGCCTACGAGCTCGTGGTGAGT ATCGCGTCCGGCACTTGCGCGATGAATACCGTGCGACCCTCGGCATCCAGGTGGCGTCGCCGAAGCAGCGTTGGGGACGG TGGACCCAAGGCGGACCCCCATGCTGGTCGTGGCGCCGGAGCGGCTGAGTCGGCGCAGGCGCCACCGGCCAAGAATCGAT CTGAGAGCCGAACCCGGAGCGGCAGGTCGACGCGCTGCAGTCTTCGAGGGCGTCCGGTATCCGAGTACACGCGATGTGCG CAGCTGCAGATCATGAGATGTGTCGGTCCTCACCGGCAAGGATGA
Upstream 100 bases:
>100_bases ATCAACCGTTCCTGCGTCGCGTCGGCCAGGTCGTGTGTGGCGGGTCGGCGTCTCGGACCGCGAAGGCGAGCAGGCCGGCC GCCAGCACGGCTCCGACACT
Downstream 100 bases:
>100_bases GTACGTCCCATCAGCACTGGCGCGGACCCGCTCTGCCTCGCATCCTTCGTTGTTGACGCTCCGTCACCACCGAAGGCCGG GCAGAGCCGAAAGCGTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGVRRGAGQELLPARGRQCSGDAYPMLDSKAATLLHSLARNHALVDGNERLALAGLIAFYGINGHRLTLTNNDAYELVVS IASGTCAMNTVRPSASRWRRRSSVGDGGPKADPHAGRGAGAAESAQAPPAKNRSESRTRSGRSTRCSLRGRPVSEYTRCA QLQIMRCVGPHRQG
Sequences:
>Translated_174_residues MGVRRGAGQELLPARGRQCSGDAYPMLDSKAATLLHSLARNHALVDGNERLALAGLIAFYGINGHRLTLTNNDAYELVVS IASGTCAMNTVRPSASRWRRRSSVGDGGPKADPHAGRGAGAAESAQAPPAKNRSESRTRSGRSTRCSLRGRPVSEYTRCA QLQIMRCVGPHRQG >Mature_173_residues GVRRGAGQELLPARGRQCSGDAYPMLDSKAATLLHSLARNHALVDGNERLALAGLIAFYGINGHRLTLTNNDAYELVVSI ASGTCAMNTVRPSASRWRRRSSVGDGGPKADPHAGRGAGAAESAQAPPAKNRSESRTRSGRSTRCSLRGRPVSEYTRCAQ LQIMRCVGPHRQG
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18535; Mature: 18404
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRRGAGQELLPARGRQCSGDAYPMLDSKAATLLHSLARNHALVDGNERLALAGLIAFY CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHH GINGHRLTLTNNDAYELVVSIASGTCAMNTVRPSASRWRRRSSVGDGGPKADPHAGRGAG CCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC AAESAQAPPAKNRSESRTRSGRSTRCSLRGRPVSEYTRCAQLQIMRCVGPHRQG CCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GVRRGAGQELLPARGRQCSGDAYPMLDSKAATLLHSLARNHALVDGNERLALAGLIAFY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHH GINGHRLTLTNNDAYELVVSIASGTCAMNTVRPSASRWRRRSSVGDGGPKADPHAGRGAG CCCCCEEEEECCCCEEEEEECCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC AAESAQAPPAKNRSESRTRSGRSTRCSLRGRPVSEYTRCAQLQIMRCVGPHRQG CCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA