| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317151
Identifier: 158317151
GI number: 158317151
Start: 6512334
End: 6513146
Strand: Direct
Name: 158317151
Synonym: Franean1_5398
Alternate gene names: NA
Gene position: 6512334-6513146 (Clockwise)
Preceding gene: 158317150
Following gene: 158317163
Centisome position: 72.5
GC content: 72.94
Gene sequence:
>813_bases GTGCGCGGCGAGGAGGAGTCCAGACGCTGGGAACTGCTGCTGACCGGGCAGACAACCCCGCGCCGCGCGGCCGGTCAGGC GGTGGCCGGCCTCAGAGTGGGACTTGCGGTCCTTCTCGCGCTCACCACGCTCGGCATGGTGGTCTCCGGCCGTTCGACGA CTGCGGACTTCAGCCTCGGGCAGTGCGTCGCCCTCGCCGCCACCGTCGTCGCCGGCGCGGCGATGTTCCTCGCCGTCGGA GCACTCGCCAGCCAGCTCGCCGCGACCCGCCGACAGGCGGCGACGATTGCCGCCGCCGTCCTGGGAGTCGGGTACGCCCT ACGGATGGCCGCCAACACCGACCGCGGCGTGCACTGGCTCGGCTGGCTGAGTCCGCTGGGATGGGTGGACCGGATCCGCC CACTGACCGACCCGAACCCGGTCGCCCTGGTCCCCGTGCTCGCCCTGACCGCCGGGGCCACCGCCGCGGCGGTATGGCTG GCGGGGCGCAGAGACGCCGGGACGGCGATCCTCCCGGGGCGGCACGCCGCAGAGACCTTCGCGCCGCATGAGCGCCGAGG CCCCGGGCCGTACCGGGAGCAAGTACGAAAGGCGGGACACGTGACAGTGTTGATCGTGGCGGAGTCGTGTTTCGGCAACA CGACCGCGGTGGCTCATGCCGTCGCAGCCGGTCTGACTCGAACCGTCCCGTTGGAGACCGGTCAGCGTCGTCCACCCTGC CGAGGCTCCCGTGACCCTGCCCGGCGACGTTCGGCTCCTGCTGGTCGGCGCCCCGACCCACGCTTTCTCACTTCCCCGGC CGCAGAGCCGTAG
Upstream 100 bases:
>100_bases GAGAGTGGGGTAGGCGTCACGCCCGAACACTGTGGCCCGTGGGCGGGCAAGAGCGGATTCGAGCAGGCCGTGGTCCCTGG CCATCGGTTCGGAGCCGAGG
Downstream 100 bases:
>100_bases GGAGGCCGAAGAAAAAGGGGCACGAGGCGTGGGGGATGCAGCTCGGCCGAGACCTGAACGGCTCGCCGGGCCGCACCGGC AACAGCACCGACTGACCGCC
Product: putative exporter of polyketide antibiotics-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MRGEEESRRWELLLTGQTTPRRAAGQAVAGLRVGLAVLLALTTLGMVVSGRSTTADFSLGQCVALAATVVAGAAMFLAVG ALASQLAATRRQAATIAAAVLGVGYALRMAANTDRGVHWLGWLSPLGWVDRIRPLTDPNPVALVPVLALTAGATAAAVWL AGRRDAGTAILPGRHAAETFAPHERRGPGPYREQVRKAGHVTVLIVAESCFGNTTAVAHAVAAGLTRTVPLETGQRRPPC RGSRDPARRRSAPAGRRPDPRFLTSPAAEP
Sequences:
>Translated_270_residues MRGEEESRRWELLLTGQTTPRRAAGQAVAGLRVGLAVLLALTTLGMVVSGRSTTADFSLGQCVALAATVVAGAAMFLAVG ALASQLAATRRQAATIAAAVLGVGYALRMAANTDRGVHWLGWLSPLGWVDRIRPLTDPNPVALVPVLALTAGATAAAVWL AGRRDAGTAILPGRHAAETFAPHERRGPGPYREQVRKAGHVTVLIVAESCFGNTTAVAHAVAAGLTRTVPLETGQRRPPC RGSRDPARRRSAPAGRRPDPRFLTSPAAEP >Mature_270_residues MRGEEESRRWELLLTGQTTPRRAAGQAVAGLRVGLAVLLALTTLGMVVSGRSTTADFSLGQCVALAATVVAGAAMFLAVG ALASQLAATRRQAATIAAAVLGVGYALRMAANTDRGVHWLGWLSPLGWVDRIRPLTDPNPVALVPVLALTAGATAAAVWL AGRRDAGTAILPGRHAAETFAPHERRGPGPYREQVRKAGHVTVLIVAESCFGNTTAVAHAVAAGLTRTVPLETGQRRPPC RGSRDPARRRSAPAGRRPDPRFLTSPAAEP
Specific function: Unknown
COG id: COG3559
COG function: function code M; Putative exporter of polyketide antibiotics
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28158; Mature: 28158
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGEEESRRWELLLTGQTTPRRAAGQAVAGLRVGLAVLLALTTLGMVVSGRSTTADFSLG CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QCVALAATVVAGAAMFLAVGALASQLAATRRQAATIAAAVLGVGYALRMAANTDRGVHWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH GWLSPLGWVDRIRPLTDPNPVALVPVLALTAGATAAAVWLAGRRDAGTAILPGRHAAETF HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCHHHHHC APHERRGPGPYREQVRKAGHVTVLIVAESCFGNTTAVAHAVAAGLTRTVPLETGQRRPPC CCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCC RGSRDPARRRSAPAGRRPDPRFLTSPAAEP CCCCCHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRGEEESRRWELLLTGQTTPRRAAGQAVAGLRVGLAVLLALTTLGMVVSGRSTTADFSLG CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH QCVALAATVVAGAAMFLAVGALASQLAATRRQAATIAAAVLGVGYALRMAANTDRGVHWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH GWLSPLGWVDRIRPLTDPNPVALVPVLALTAGATAAAVWLAGRRDAGTAILPGRHAAETF HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCHHHHHC APHERRGPGPYREQVRKAGHVTVLIVAESCFGNTTAVAHAVAAGLTRTVPLETGQRRPPC CCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCHHCCCCCCCCCCCCC RGSRDPARRRSAPAGRRPDPRFLTSPAAEP CCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA