Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317150

Identifier: 158317150

GI number: 158317150

Start: 6510476

End: 6511714

Strand: Direct

Name: 158317150

Synonym: Franean1_5396

Alternate gene names: NA

Gene position: 6510476-6511714 (Clockwise)

Preceding gene: 158317145

Following gene: 158317151

Centisome position: 72.48

GC content: 61.99

Gene sequence:

>1239_bases
ATGGCGGCAGACGAACAGAAATTCGACAAGATCATAGTAGATCGGTCGGAGGGGTTCGGCGAGCGGCTGCTGGGTGTGTT
GCTGGATCGCGCTCACGAGATGCCGCCGCAGCTGATCGCCCCCCTGGTCGCGGAAGAGATCGGCAGGATCGGTGGGCGGG
ACATCTCGATCCTTCTGCAGGACTATGAGCAGCTGGTGCTGACGCCGCTGCCGGGCAGGAGCCTCACGGTCGGGGAGCCT
GAGCCGATCAACGGCTCCCCGGCCGGCACGGCATTCCTGCGCGCGATGACCGTCGAACAGCCGCAAGATGGCGGTATACG
GATGTTCCTGCCACTGCTGGACGGTAGCGACCAGGTGGGCGTGCTGGCCCTCACCCTCGACACCGTCGATGATGATGACC
GGCGGTTGCTGCGGCGGCTCGCCGGCCTTGTCGCCGACATGCTGGTCACCAAAAGCAGCTACACCGACCAGTTCTTCCAG
GCCCGGCGTCGCGAACCGATGAGTGTGGCCGCGGAAATCCAATGGTCACTGTTGCCCCCGCTGACCATGATCACCCCGCA
GGTCGCGGTAGCCGGCGTCCTTGAACCCGCCTACGACATCGCAGGCGACAGCTTCGACTACGCTCTCAACGATGACATCC
TGCACGTGGCCGTTATCGACGCGATGGGTCACAGTCTGGACGCCGCAGTGCTGGCAACGGTCGCGATCGGCGCCTACCGG
CACGCCAGACGTGCCGGCATCGGGCTTGCCGAGCTGTACATGTTCATGGACACAGCCATCCACAGGCAGTTCGGACCCGA
CCACTTCGTCACCGCGCAGATGATGCGTTTGGATATCGGAACTGGTCACCTGAAATGGGTCAATGCAGGTCATCCGGCAG
CGCTACTGATCCGCAACCATAGGGTTATCCAGGAGCTGGAGAGCCCGGGAACCCTGCCAGTCGGATTCGGTGGCGACATA
CCGCAGGTCAGTGAGCAGACGCTCTTGCGCGGCGACCGGGTGCTATTCTTCACCGATGGCCTCATCGAGGAGCACGAAAA
AGGCGGAGAACAATTCGGCAAAGAACGCCTGATCAACTTTGTTGAGAATATCCAGGGTAAAAGCATCCGGGAGATGGTCC
GAGATCTGTCCCATGCACTGATGCGGGAAAGGCGCGGGATCACGACCGACGACGCGACTCTCTTCCTGGTAGAGTGGCGC
GGAGGCACCGCCGACCATCTCGCCAGCATAGATATTTAA

Upstream 100 bases:

>100_bases
CGTCAATCAAGGGTGAAGCGGGGTGTCGACGTGACCCGTTGACGCCATCCCGAGAGGCTCGCACAGATATGAACGGCCGG
ACAGGGGAGAGGGGGTGGCC

Downstream 100 bases:

>100_bases
CCAGGAAGACGTTGATGGCGCCGATCGTCTCAGGTTCCGTCTCAATCGTGCGTGTCCGCGGCTGTTCGCAGCGATGGGGG
AGCGTGCCCGACGCGCGAAA

Product: protein serine/threonine phosphatase

Products: NA

Alternate protein names: Magnesium Or Manganese-Dependent Protein Phosphatase; Serine Phosphatase; Stage II Sporulation Protein E; PAS/PAC Sensor Protein; Response Regulator Receiver Modulated Serine Phosphatase; Stage II Sporulation E Family Protein; Sigma Factor SigB Regulation Protein RsbU; Phosphatase; Phosphoserine Phosphatase; Regulatory Protein; Serine Phosphatase RsbU; PAS Sensor Protein; C-Like Stage II Sporulation E; Phytochrome Sensor Protein; Stage II Sporulation E Protein; GAF Sensor Protein; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Phosphodiesterase Or Phosphatase; Response Receiver Sensor Phosphatase; IcfG-Like Protein; Sigma Factor PP2C-Like Phosphatases; Response Regulator Receiver Domain-Containing Protein; Sigma Factor Regulation Protein; Regulator; Phosphoserine Phosphatase RsbU; ATPase/Protein Kinase; Response Regulator; Sigma-B Regulation Protein; GAF/FHA/SpoE Domain Protein; Serine/Threonine Kinase; Cache/SpoIIE Domain-Containing Protein; SpoIIE Domain-Containing Protein; GAF Domain-Containing Protein; CHASE2Stage II Sporulation E; Sporulation Family Protein; Chemotaxis Response Regulator; Cache/HAMP/SpoIIE Domain-Containing Protein; Sensory Box Protein; Serine Phosphatase RsbU Regulator Sigma Subunit; Serine Phosphatase Regulator Of Sigma Subunit; Two-Component System Response Regulator; Protein Serine Phosphatase; Serine/Threonine Phosphatase; Sigma Regulator Protein Sensor Phosphatase Domains; Protein Phosphatase; C Domain-Containing Protein; Response Regulator Receiver Protein; CBS Domain Pair-Containing PP2C Family Phosphatase

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MAADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQDYEQLVLTPLPGRSLTVGEP
EPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVGVLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQ
ARRREPMSVAAEIQWSLLPPLTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR
HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNHRVIQELESPGTLPVGFGGDI
PQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINFVENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWR
GGTADHLASIDI

Sequences:

>Translated_412_residues
MAADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQDYEQLVLTPLPGRSLTVGEP
EPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVGVLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQ
ARRREPMSVAAEIQWSLLPPLTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR
HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNHRVIQELESPGTLPVGFGGDI
PQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINFVENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWR
GGTADHLASIDI
>Mature_411_residues
AADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQDYEQLVLTPLPGRSLTVGEPE
PINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVGVLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQA
RRREPMSVAAEIQWSLLPPLTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYRH
ARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNHRVIQELESPGTLPVGFGGDIP
QVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINFVENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWRG
GTADHLASIDI

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45324; Mature: 45192

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQ
CCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
DYEQLVLTPLPGRSLTVGEPEPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVG
HHHHHEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCE
VLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQARRREPMSVAAEIQWSLLPP
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHEEHHHCCC
LTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR
HHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHH
HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNH
HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCEEEEEHHH
RVIQELESPGTLPVGFGGDIPQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINF
HHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
VENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWRGGTADHLASIDI
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHEECCC
>Mature Secondary Structure 
AADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQ
CCCHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
DYEQLVLTPLPGRSLTVGEPEPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVG
HHHHHEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCE
VLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQARRREPMSVAAEIQWSLLPP
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHEEHHHCCC
LTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR
HHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHH
HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNH
HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCEEEEEHHH
RVIQELESPGTLPVGFGGDIPQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINF
HHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
VENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWRGGTADHLASIDI
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA