| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317150
Identifier: 158317150
GI number: 158317150
Start: 6510476
End: 6511714
Strand: Direct
Name: 158317150
Synonym: Franean1_5396
Alternate gene names: NA
Gene position: 6510476-6511714 (Clockwise)
Preceding gene: 158317145
Following gene: 158317151
Centisome position: 72.48
GC content: 61.99
Gene sequence:
>1239_bases ATGGCGGCAGACGAACAGAAATTCGACAAGATCATAGTAGATCGGTCGGAGGGGTTCGGCGAGCGGCTGCTGGGTGTGTT GCTGGATCGCGCTCACGAGATGCCGCCGCAGCTGATCGCCCCCCTGGTCGCGGAAGAGATCGGCAGGATCGGTGGGCGGG ACATCTCGATCCTTCTGCAGGACTATGAGCAGCTGGTGCTGACGCCGCTGCCGGGCAGGAGCCTCACGGTCGGGGAGCCT GAGCCGATCAACGGCTCCCCGGCCGGCACGGCATTCCTGCGCGCGATGACCGTCGAACAGCCGCAAGATGGCGGTATACG GATGTTCCTGCCACTGCTGGACGGTAGCGACCAGGTGGGCGTGCTGGCCCTCACCCTCGACACCGTCGATGATGATGACC GGCGGTTGCTGCGGCGGCTCGCCGGCCTTGTCGCCGACATGCTGGTCACCAAAAGCAGCTACACCGACCAGTTCTTCCAG GCCCGGCGTCGCGAACCGATGAGTGTGGCCGCGGAAATCCAATGGTCACTGTTGCCCCCGCTGACCATGATCACCCCGCA GGTCGCGGTAGCCGGCGTCCTTGAACCCGCCTACGACATCGCAGGCGACAGCTTCGACTACGCTCTCAACGATGACATCC TGCACGTGGCCGTTATCGACGCGATGGGTCACAGTCTGGACGCCGCAGTGCTGGCAACGGTCGCGATCGGCGCCTACCGG CACGCCAGACGTGCCGGCATCGGGCTTGCCGAGCTGTACATGTTCATGGACACAGCCATCCACAGGCAGTTCGGACCCGA CCACTTCGTCACCGCGCAGATGATGCGTTTGGATATCGGAACTGGTCACCTGAAATGGGTCAATGCAGGTCATCCGGCAG CGCTACTGATCCGCAACCATAGGGTTATCCAGGAGCTGGAGAGCCCGGGAACCCTGCCAGTCGGATTCGGTGGCGACATA CCGCAGGTCAGTGAGCAGACGCTCTTGCGCGGCGACCGGGTGCTATTCTTCACCGATGGCCTCATCGAGGAGCACGAAAA AGGCGGAGAACAATTCGGCAAAGAACGCCTGATCAACTTTGTTGAGAATATCCAGGGTAAAAGCATCCGGGAGATGGTCC GAGATCTGTCCCATGCACTGATGCGGGAAAGGCGCGGGATCACGACCGACGACGCGACTCTCTTCCTGGTAGAGTGGCGC GGAGGCACCGCCGACCATCTCGCCAGCATAGATATTTAA
Upstream 100 bases:
>100_bases CGTCAATCAAGGGTGAAGCGGGGTGTCGACGTGACCCGTTGACGCCATCCCGAGAGGCTCGCACAGATATGAACGGCCGG ACAGGGGAGAGGGGGTGGCC
Downstream 100 bases:
>100_bases CCAGGAAGACGTTGATGGCGCCGATCGTCTCAGGTTCCGTCTCAATCGTGCGTGTCCGCGGCTGTTCGCAGCGATGGGGG AGCGTGCCCGACGCGCGAAA
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Magnesium Or Manganese-Dependent Protein Phosphatase; Serine Phosphatase; Stage II Sporulation Protein E; PAS/PAC Sensor Protein; Response Regulator Receiver Modulated Serine Phosphatase; Stage II Sporulation E Family Protein; Sigma Factor SigB Regulation Protein RsbU; Phosphatase; Phosphoserine Phosphatase; Regulatory Protein; Serine Phosphatase RsbU; PAS Sensor Protein; C-Like Stage II Sporulation E; Phytochrome Sensor Protein; Stage II Sporulation E Protein; GAF Sensor Protein; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Phosphodiesterase Or Phosphatase; Response Receiver Sensor Phosphatase; IcfG-Like Protein; Sigma Factor PP2C-Like Phosphatases; Response Regulator Receiver Domain-Containing Protein; Sigma Factor Regulation Protein; Regulator; Phosphoserine Phosphatase RsbU; ATPase/Protein Kinase; Response Regulator; Sigma-B Regulation Protein; GAF/FHA/SpoE Domain Protein; Serine/Threonine Kinase; Cache/SpoIIE Domain-Containing Protein; SpoIIE Domain-Containing Protein; GAF Domain-Containing Protein; CHASE2Stage II Sporulation E; Sporulation Family Protein; Chemotaxis Response Regulator; Cache/HAMP/SpoIIE Domain-Containing Protein; Sensory Box Protein; Serine Phosphatase RsbU Regulator Sigma Subunit; Serine Phosphatase Regulator Of Sigma Subunit; Two-Component System Response Regulator; Protein Serine Phosphatase; Serine/Threonine Phosphatase; Sigma Regulator Protein Sensor Phosphatase Domains; Protein Phosphatase; C Domain-Containing Protein; Response Regulator Receiver Protein; CBS Domain Pair-Containing PP2C Family Phosphatase
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MAADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQDYEQLVLTPLPGRSLTVGEP EPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVGVLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQ ARRREPMSVAAEIQWSLLPPLTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNHRVIQELESPGTLPVGFGGDI PQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINFVENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWR GGTADHLASIDI
Sequences:
>Translated_412_residues MAADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQDYEQLVLTPLPGRSLTVGEP EPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVGVLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQ ARRREPMSVAAEIQWSLLPPLTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNHRVIQELESPGTLPVGFGGDI PQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINFVENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWR GGTADHLASIDI >Mature_411_residues AADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQDYEQLVLTPLPGRSLTVGEPE PINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVGVLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQA RRREPMSVAAEIQWSLLPPLTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYRH ARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNHRVIQELESPGTLPVGFGGDIP QVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINFVENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWRG GTADHLASIDI
Specific function: Unknown
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45324; Mature: 45192
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQ CCCCHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH DYEQLVLTPLPGRSLTVGEPEPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVG HHHHHEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCE VLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQARRREPMSVAAEIQWSLLPP EEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHEEHHHCCC LTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR HHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHH HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNH HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCEEEEEHHH RVIQELESPGTLPVGFGGDIPQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINF HHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH VENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWRGGTADHLASIDI HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHEECCC >Mature Secondary Structure AADEQKFDKIIVDRSEGFGERLLGVLLDRAHEMPPQLIAPLVAEEIGRIGGRDISILLQ CCCHHHHHHHEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH DYEQLVLTPLPGRSLTVGEPEPINGSPAGTAFLRAMTVEQPQDGGIRMFLPLLDGSDQVG HHHHHEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCE VLALTLDTVDDDDRRLLRRLAGLVADMLVTKSSYTDQFFQARRREPMSVAAEIQWSLLPP EEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHEEHHHCCC LTMITPQVAVAGVLEPAYDIAGDSFDYALNDDILHVAVIDAMGHSLDAAVLATVAIGAYR HHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHH HARRAGIGLAELYMFMDTAIHRQFGPDHFVTAQMMRLDIGTGHLKWVNAGHPAALLIRNH HHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCEEEEECCCCEEEEEHHH RVIQELESPGTLPVGFGGDIPQVSEQTLLRGDRVLFFTDGLIEEHEKGGEQFGKERLINF HHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH VENIQGKSIREMVRDLSHALMRERRGITTDDATLFLVEWRGGTADHLASIDI HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA