| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317138
Identifier: 158317138
GI number: 158317138
Start: 6493412
End: 6494332
Strand: Direct
Name: 158317138
Synonym: Franean1_5384
Alternate gene names: NA
Gene position: 6493412-6494332 (Clockwise)
Preceding gene: 158317137
Following gene: 158317139
Centisome position: 72.29
GC content: 68.19
Gene sequence:
>921_bases GTGCTCGCCTCGCTGGACTTCCCGTCGATGGCCCGCTTCTGCGGCCAGTTCTTCGCCAGCCGAGTCGACCAGGACCCCGG CCTTGCCCTCGCCGTCCTGAAGGCCTACAACGACTGGCACCTCGACGCCTGGTGCGGCTCCTACCGCGACCGGTTCATCC CCTGCTCGATCCCGCCCATCTGGGACCCCCAGCTGATGGCCGCCGAGATCCGCCGGACCGCGGCCAAGGGCTCGCACGCG GTCAGCTTCTCGATGAACCCCTACGCTCTCGGTCTGCCGTCACTGCACAGCGACCACTGGGACCCGTTCTGGGCGGCGTG TCAGGAGACCGAGACGGTCGTGTGCGTGCACATCGGGTCGGGGCGGCATCGGGTGGATTACACCTACAAGCAGCACAAGG CATGGACCCGCCCCAACCTCGGCGGCCGGCTACCGAGCGAAGTCTTCCTCGACCACGTCGTCACCTGCTTCATCGTCGAC GCCTTCGGCCTGGCCAACCTTGACCGGATGAACGAGGACATGATCACCTGGGAATGCGACTACCCCAACTCCGACAGCAC CTGGCCGCGCTCCCCCGAGGTGGTGGCGGAGGCAGTGGCCGGGCTGACCGACACGCAGGTCGACAAAGTCACCCACCTGA ATGCCATGCGGGTGTTCTCGTTCGACCCGTTCGCCCTCCGGCCGCGCGAGCAGTGCACGACCGGCGCGTTGCGGCGGGAA GTTGCAGGCCACGACATCTCGATCGTCTCCCGCGGCACTCGGGACTGGAAGGCGGTCACAGTGGACAGTTCGCCCACTCG CACCAGCCGACCAGCACGGCGTGAGCGCGGCGCCACTCGCCGGGGTGCGGGTGCTCGAGGTGGCCTCGCACGTTTTCGTC CCGTTGTCGGGGGCCGTGCTCGCCGCGTGGGGAACCCTTGA
Upstream 100 bases:
>100_bases CCGCCTGAGGAGCATGGCGTGGAGCCGACGCGGCTCGAGGAACTGCGGCGGGGCTGCTACGACGTGCATGAGCGAGTCAA AGATATGAGCGCCAACAGGC
Downstream 100 bases:
>100_bases TACTTCCGTATCGCACCGCCGACCATGGCGACCGACCCCCGCTTCCTCGACATCGACGCCCGCCGCCGCAACGCCCAGGC ATGCGCCGAGTGGCTCGACA
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidase; TIM-Barrel Fold Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Hydrolase
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLASLDFPSMARFCGQFFASRVDQDPGLALAVLKAYNDWHLDAWCGSYRDRFIPCSIPPIWDPQLMAAEIRRTAAKGSHA VSFSMNPYALGLPSLHSDHWDPFWAACQETETVVCVHIGSGRHRVDYTYKQHKAWTRPNLGGRLPSEVFLDHVVTCFIVD AFGLANLDRMNEDMITWECDYPNSDSTWPRSPEVVAEAVAGLTDTQVDKVTHLNAMRVFSFDPFALRPREQCTTGALRRE VAGHDISIVSRGTRDWKAVTVDSSPTRTSRPARRERGATRRGAGARGGLARFRPVVGGRARRVGNP
Sequences:
>Translated_306_residues MLASLDFPSMARFCGQFFASRVDQDPGLALAVLKAYNDWHLDAWCGSYRDRFIPCSIPPIWDPQLMAAEIRRTAAKGSHA VSFSMNPYALGLPSLHSDHWDPFWAACQETETVVCVHIGSGRHRVDYTYKQHKAWTRPNLGGRLPSEVFLDHVVTCFIVD AFGLANLDRMNEDMITWECDYPNSDSTWPRSPEVVAEAVAGLTDTQVDKVTHLNAMRVFSFDPFALRPREQCTTGALRRE VAGHDISIVSRGTRDWKAVTVDSSPTRTSRPARRERGATRRGAGARGGLARFRPVVGGRARRVGNP >Mature_306_residues MLASLDFPSMARFCGQFFASRVDQDPGLALAVLKAYNDWHLDAWCGSYRDRFIPCSIPPIWDPQLMAAEIRRTAAKGSHA VSFSMNPYALGLPSLHSDHWDPFWAACQETETVVCVHIGSGRHRVDYTYKQHKAWTRPNLGGRLPSEVFLDHVVTCFIVD AFGLANLDRMNEDMITWECDYPNSDSTWPRSPEVVAEAVAGLTDTQVDKVTHLNAMRVFSFDPFALRPREQCTTGALRRE VAGHDISIVSRGTRDWKAVTVDSSPTRTSRPARRERGATRRGAGARGGLARFRPVVGGRARRVGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34159; Mature: 34159
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASLDFPSMARFCGQFFASRVDQDPGLALAVLKAYNDWHLDAWCGSYRDRFIPCSIPPI CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCHHHHHHHCCCEECCCCCCC WDPQLMAAEIRRTAAKGSHAVSFSMNPYALGLPSLHSDHWDPFWAACQETETVVCVHIGS CCHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEEECC GRHRVDYTYKQHKAWTRPNLGGRLPSEVFLDHVVTCFIVDAFGLANLDRMNEDMITWECD CCEEECEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECC YPNSDSTWPRSPEVVAEAVAGLTDTQVDKVTHLNAMRVFSFDPFALRPREQCTTGALRRE CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHH VAGHDISIVSRGTRDWKAVTVDSSPTRTSRPARRERGATRRGAGARGGLARFRPVVGGRA HCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCC RRVGNP CCCCCC >Mature Secondary Structure MLASLDFPSMARFCGQFFASRVDQDPGLALAVLKAYNDWHLDAWCGSYRDRFIPCSIPPI CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCCHHHHHHHCCCEECCCCCCC WDPQLMAAEIRRTAAKGSHAVSFSMNPYALGLPSLHSDHWDPFWAACQETETVVCVHIGS CCHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCCCCCHHHHHHCCCCEEEEEEECC GRHRVDYTYKQHKAWTRPNLGGRLPSEVFLDHVVTCFIVDAFGLANLDRMNEDMITWECD CCEEECEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECC YPNSDSTWPRSPEVVAEAVAGLTDTQVDKVTHLNAMRVFSFDPFALRPREQCTTGALRRE CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHH VAGHDISIVSRGTRDWKAVTVDSSPTRTSRPARRERGATRRGAGARGGLARFRPVVGGRA HCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCC RRVGNP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA