| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317139
Identifier: 158317139
GI number: 158317139
Start: 6494461
End: 6494736
Strand: Direct
Name: 158317139
Synonym: Franean1_5385
Alternate gene names: NA
Gene position: 6494461-6494736 (Clockwise)
Preceding gene: 158317138
Following gene: 158317140
Centisome position: 72.3
GC content: 65.94
Gene sequence:
>276_bases GTGGCGGCAAAGTTCGAGGGTGAGTGGGCACCGAGCCAACAGCCCCACGAGCTGGCGCAGGACCCCCAGGTCCAAGCCAA CGGCTACCTCGCCGATATCGACATAGGCAACGGCCACTCCCTCTCGCTGGCGACCGCACCCGTGCAGTTCGACCAGCAGC CCAGCCAGCCGGCCCGCACCCCCGAGCACGGCGAACACACCGAGACCGTGCTCCTCGAACTCGGCCTCACCTGGGACGAA ATCGACGAACTCAAAGCCAGCAAGGCCATCCTGTAA
Upstream 100 bases:
>100_bases CGACCGACCCCCGCTTCCTCGACATCGACGCCCGCCGCCGCAACGCCCAGGCATGCGCCGAGTGGCTCGACAGCGTCTTC ACCCAGCACACCTTTGACGA
Downstream 100 bases:
>100_bases ACGGGCGCGGCAGTCACATCTAAAGGCAGTTGGGATTGGCCGGGCAAGGCAAGGAATTGGCCGAATACGTAAAGATCGCG CTAAGCTCAACCGGAAGGAT
Product: putative fatty acid-CoA racemase
Products: NA
Alternate protein names: Formyl-CoA Transferase; Fatty Acid-CoA Racemase; Dehydratase; Formyl-Co A Transferase; CaiB/BaiF Family Protein
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MAAKFEGEWAPSQQPHELAQDPQVQANGYLADIDIGNGHSLSLATAPVQFDQQPSQPARTPEHGEHTETVLLELGLTWDE IDELKASKAIL
Sequences:
>Translated_91_residues MAAKFEGEWAPSQQPHELAQDPQVQANGYLADIDIGNGHSLSLATAPVQFDQQPSQPARTPEHGEHTETVLLELGLTWDE IDELKASKAIL >Mature_90_residues AAKFEGEWAPSQQPHELAQDPQVQANGYLADIDIGNGHSLSLATAPVQFDQQPSQPARTPEHGEHTETVLLELGLTWDEI DELKASKAIL
Specific function: Unknown
COG id: COG1804
COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9929; Mature: 9798
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKFEGEWAPSQQPHELAQDPQVQANGYLADIDIGNGHSLSLATAPVQFDQQPSQPART CCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC PEHGEHTETVLLELGLTWDEIDELKASKAIL CCCCCCCEEEEEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure AAKFEGEWAPSQQPHELAQDPQVQANGYLADIDIGNGHSLSLATAPVQFDQQPSQPART CCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC PEHGEHTETVLLELGLTWDEIDELKASKAIL CCCCCCCEEEEEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA