| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is msuE [H]
Identifier: 158317119
GI number: 158317119
Start: 6467511
End: 6468956
Strand: Direct
Name: msuE [H]
Synonym: Franean1_5363
Alternate gene names: 158317119
Gene position: 6467511-6468956 (Clockwise)
Preceding gene: 158317118
Following gene: 158317120
Centisome position: 72.0
GC content: 67.08
Gene sequence:
>1446_bases GTGCAGTTCGGCGTTTTCAGCATCGGTGATGTCAAGGCCGACCCCACCACGGGCCGGACACCGACCGAGCACGAGCGGAT CAAGTCGATGGTCGCGACCGCGGTCAAGGCCGAAGAGGTCGGCTTCGATGTCTTCGCGACCGGCGAGCACCACAACCAGC CGTTCGTCTCCTCCTCGCCGACCACCCTGCTCAGCCACATCGCCGCGCGGACCGGCCGGATCGTCCTGTCGACGTCGACC ACGCTGATCACCACCAACGACCCAGTGAAGATCGCCGAGGACTACGCGGTGCTCCAGCATCTCGCCGACGGACGCGTGGA CCTTATGATGGGCCGCGGCAACACCGGTCCGGTTTACCCCTGGTTCGGCAAGGATGTCCGCCAGGGCATCCCGCTCGCCA TCGAGAACTACGCGCTGCTGCACCAGCTGTGGCACGAGGAGGTCGTCGACTGGCAGGGCCGCTTCCGCACCCCCCTCCGG GGGTTCACCTCAACGCCGCGGCCGCTGGACGGCATCCCGCCGTTCGTCTGGCACGGCTCCGTCCGCAGCCCCGAGATCGC CGAACAGGCCGCCTACTACGGCGACGGTTTCTTCGCGAACAACCTCTTCGGGCCCAAGGAGCACTTCCAGAAGCTGATCA ATCTCTACCGCGAGCGCTACGCCCACTACGGTCACGGCACCGAGGAACAGGCCATCGTCGGGCTCGGTGGCCACGTCTTC CTGCGCAGGAACTCCCAGGACGCGGTACGCGAGTACCGCCCCTACTTCGACAACTCCCCCGTCTACGGCCACGGCCCGTC GATGGAGCGGTGCATGGAGCAGACCTCGCTCACCGTCGGCAGCCCGCAGGAAGTCATCGACAAGACGCTGACCTTCCGCG ACCACTTCGGCGACTACCAGCGCCAGCTGTTCAACATCGATATGGCCGGCCTGCCACTGAAGACCGTCCTCGAACAGCGC GACCTGGCCGTCGACATCGCCAACAACCTGGTCACCGGCTTCCCCTCGGCTGCCCTGGCGGAAGCCGTGGAGGCGGTCAC CTCGACGGACGGTCTGATCGCCGTCACCCCGGTCTTCTCGGCCTCGTACAGTGGGCTCTTCAAGTCGTTCTTCGACGTCA TCGATAATGACGCCCTCACCGGAAAGGCCGTGCTGGCTGCGGCGACCGGCGGGACGGCACGACACTCGCTCACCCTGGAG CACGCGCTGCGTCCGCTCTTCGCCTACCTTCGCGCGCTTGTCGTGCCCACCGCGGTGTACGCGGCCTCCGAGGACTGGGG CGGCAGCGGCGATCCCCTTACCGACACGCTGCCCAACCGGATCGTGCGTGCGGCCGGCGAACTCGCCGGGCTCATGCGCC AACGCGCGGGCGATGCCGCCCGAACCACCAACGACACCGCCGTCGTACCGTTCGAACAGCAATTGGACGCACTGCGACCC GCGTGA
Upstream 100 bases:
>100_bases ACGCGGCTCCGCCGTCCCACACAGCCGCGTGGGACGGCACCTCACGAGCTCGCACACGACCCAGCTCCCCACAGCCTTTG TCTCTTGCCCGGGAGGCGCA
Downstream 100 bases:
>100_bases AGCCGCCGCCCTGCGCATCCCGGGCCACTCCCGTCATTCGCGTCGAGCAAGGCACGCAGTTGGTCGATCCGCTCGCCAGT GAGGTTGGCGAAGGCGTCGC
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MQFGVFSIGDVKADPTTGRTPTEHERIKSMVATAVKAEEVGFDVFATGEHHNQPFVSSSPTTLLSHIAARTGRIVLSTST TLITTNDPVKIAEDYAVLQHLADGRVDLMMGRGNTGPVYPWFGKDVRQGIPLAIENYALLHQLWHEEVVDWQGRFRTPLR GFTSTPRPLDGIPPFVWHGSVRSPEIAEQAAYYGDGFFANNLFGPKEHFQKLINLYRERYAHYGHGTEEQAIVGLGGHVF LRRNSQDAVREYRPYFDNSPVYGHGPSMERCMEQTSLTVGSPQEVIDKTLTFRDHFGDYQRQLFNIDMAGLPLKTVLEQR DLAVDIANNLVTGFPSAALAEAVEAVTSTDGLIAVTPVFSASYSGLFKSFFDVIDNDALTGKAVLAAATGGTARHSLTLE HALRPLFAYLRALVVPTAVYAASEDWGGSGDPLTDTLPNRIVRAAGELAGLMRQRAGDAARTTNDTAVVPFEQQLDALRP A
Sequences:
>Translated_481_residues MQFGVFSIGDVKADPTTGRTPTEHERIKSMVATAVKAEEVGFDVFATGEHHNQPFVSSSPTTLLSHIAARTGRIVLSTST TLITTNDPVKIAEDYAVLQHLADGRVDLMMGRGNTGPVYPWFGKDVRQGIPLAIENYALLHQLWHEEVVDWQGRFRTPLR GFTSTPRPLDGIPPFVWHGSVRSPEIAEQAAYYGDGFFANNLFGPKEHFQKLINLYRERYAHYGHGTEEQAIVGLGGHVF LRRNSQDAVREYRPYFDNSPVYGHGPSMERCMEQTSLTVGSPQEVIDKTLTFRDHFGDYQRQLFNIDMAGLPLKTVLEQR DLAVDIANNLVTGFPSAALAEAVEAVTSTDGLIAVTPVFSASYSGLFKSFFDVIDNDALTGKAVLAAATGGTARHSLTLE HALRPLFAYLRALVVPTAVYAASEDWGGSGDPLTDTLPNRIVRAAGELAGLMRQRAGDAARTTNDTAVVPFEQQLDALRP A >Mature_481_residues MQFGVFSIGDVKADPTTGRTPTEHERIKSMVATAVKAEEVGFDVFATGEHHNQPFVSSSPTTLLSHIAARTGRIVLSTST TLITTNDPVKIAEDYAVLQHLADGRVDLMMGRGNTGPVYPWFGKDVRQGIPLAIENYALLHQLWHEEVVDWQGRFRTPLR GFTSTPRPLDGIPPFVWHGSVRSPEIAEQAAYYGDGFFANNLFGPKEHFQKLINLYRERYAHYGHGTEEQAIVGLGGHVF LRRNSQDAVREYRPYFDNSPVYGHGPSMERCMEQTSLTVGSPQEVIDKTLTFRDHFGDYQRQLFNIDMAGLPLKTVLEQR DLAVDIANNLVTGFPSAALAEAVEAVTSTDGLIAVTPVFSASYSGLFKSFFDVIDNDALTGKAVLAAATGGTARHSLTLE HALRPLFAYLRALVVPTAVYAASEDWGGSGDPLTDTLPNRIVRAAGELAGLMRQRAGDAARTTNDTAVVPFEQQLDALRP A
Specific function: Catalyzes An NAD(P)H-Dependent Reduction Of Fmn, But Is Also Able To Reduce FAD Or Riboflavin. [C]
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1787168, Length=92, Percent_Identity=42.3913043478261, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019912 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: =1.5.1.29 [H]
Molecular weight: Translated: 52689; Mature: 52689
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFGVFSIGDVKADPTTGRTPTEHERIKSMVATAVKAEEVGFDVFATGEHHNQPFVSSSP CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCH TTLLSHIAARTGRIVLSTSTTLITTNDPVKIAEDYAVLQHLADGRVDLMMGRGNTGPVYP HHHHHHHHHHCCCEEEEECEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC WFGKDVRQGIPLAIENYALLHQLWHEEVVDWQGRFRTPLRGFTSTPRPLDGIPPFVWHGS CCCHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC VRSPEIAEQAAYYGDGFFANNLFGPKEHFQKLINLYRERYAHYGHGTEEQAIVGLGGHVF CCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEE LRRNSQDAVREYRPYFDNSPVYGHGPSMERCMEQTSLTVGSPQEVIDKTLTFRDHFGDYQ EEECCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RQLFNIDMAGLPLKTVLEQRDLAVDIANNLVTGFPSAALAEAVEAVTSTDGLIAVTPVFS HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHH ASYSGLFKSFFDVIDNDALTGKAVLAAATGGTARHSLTLEHALRPLFAYLRALVVPTAVY HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHH AASEDWGGSGDPLTDTLPNRIVRAAGELAGLMRQRAGDAARTTNDTAVVPFEQQLDALRP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCC A C >Mature Secondary Structure MQFGVFSIGDVKADPTTGRTPTEHERIKSMVATAVKAEEVGFDVFATGEHHNQPFVSSSP CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCH TTLLSHIAARTGRIVLSTSTTLITTNDPVKIAEDYAVLQHLADGRVDLMMGRGNTGPVYP HHHHHHHHHHCCCEEEEECEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC WFGKDVRQGIPLAIENYALLHQLWHEEVVDWQGRFRTPLRGFTSTPRPLDGIPPFVWHGS CCCHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC VRSPEIAEQAAYYGDGFFANNLFGPKEHFQKLINLYRERYAHYGHGTEEQAIVGLGGHVF CCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEE LRRNSQDAVREYRPYFDNSPVYGHGPSMERCMEQTSLTVGSPQEVIDKTLTFRDHFGDYQ EEECCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RQLFNIDMAGLPLKTVLEQRDLAVDIANNLVTGFPSAALAEAVEAVTSTDGLIAVTPVFS HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHHH ASYSGLFKSFFDVIDNDALTGKAVLAAATGGTARHSLTLEHALRPLFAYLRALVVPTAVY HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHH AASEDWGGSGDPLTDTLPNRIVRAAGELAGLMRQRAGDAARTTNDTAVVPFEQQLDALRP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10049377; 10984043 [H]