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The map label for this gene is ycaC [H]

Identifier: 158317118

GI number: 158317118

Start: 6466610

End: 6467296

Strand: Direct

Name: ycaC [H]

Synonym: Franean1_5362

Alternate gene names: 158317118

Gene position: 6466610-6467296 (Clockwise)

Preceding gene: 158317116

Following gene: 158317119

Centisome position: 71.99

GC content: 66.23

Gene sequence:

>687_bases
GTGAAGATTGGCCGACAAAGTAATGTCGTTCATCGGGATCCCCGGCCGATCCGCACCACAACCAGCACAGCTGTCCCCAC
ACCCCGGAAGAGGCCCCTCATGACCGCACAGCCCTTCACCGCCGACAACACCGCCATGCTCCTCATCGACCACCAGGTCG
GCACCATGGGATGGGTCGGCTCCATCTCCTTCGGCGAGATGAAGGCCAACGCCCTCGCCCTCGCCAAGGCCGCCAAGGCC
CTGGACATCCCCCTGGTCCTCACTTCCTCCATGGAGGAGTATGCCCAGGGACCCCTGCTCGCCGAACTCGCGGACATCGC
GCCCGAGGAGTTCGCCGCCCGCATCCAGCGCCATGGCGTCGTCAACGCCTTCGACGACGAGCACTTCGCCGCCGCCGTCA
AGGCCACCGGCCGCAACAACCTGATCATCGCCGGCGTCACCAACGATGTCTGCACCGTCTTCCCCACCCTCACCGCCCTC
GCCCAGGGCCACCGGGTCCAGGTCGTCGCCGACGCCGGCGGCTCCCCTGCCAAGATCGCCGACGACACCGCCATCCACCG
CATGGACAAGGCCGGCGCCACCATCACCTCCACCAACCAGCTCCTCGCCGAACTCGCCGAGAACTGGACCACCGACCGCG
GCAGCAAGATCATCTCTATCCTCATGGAACTCCTCCCCCAGAACTAA

Upstream 100 bases:

>100_bases
GCCGCCGACCCCCGCCGGGCGAGGGGGTGTGGGGGGTGGTTGGGTCGGGGCCTGGCTGTCGTGCCGCTGGGGAATAGATC
CGGGGTGAGGTGCGCTGACC

Downstream 100 bases:

>100_bases
CCCACAGCGCAGGATCAAGGACCCGTCCTGACCAGGGATTTTGCGATCGAAGAGGTGCGGGGTGAGCCCGGCCCACCCCG
CACCCCGCACCCCGAGGGTC

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKIGRQSNVVHRDPRPIRTTTSTAVPTPRKRPLMTAQPFTADNTAMLLIDHQVGTMGWVGSISFGEMKANALALAKAAKA
LDIPLVLTSSMEEYAQGPLLAELADIAPEEFAARIQRHGVVNAFDDEHFAAAVKATGRNNLIIAGVTNDVCTVFPTLTAL
AQGHRVQVVADAGGSPAKIADDTAIHRMDKAGATITSTNQLLAELAENWTTDRGSKIISILMELLPQN

Sequences:

>Translated_228_residues
MKIGRQSNVVHRDPRPIRTTTSTAVPTPRKRPLMTAQPFTADNTAMLLIDHQVGTMGWVGSISFGEMKANALALAKAAKA
LDIPLVLTSSMEEYAQGPLLAELADIAPEEFAARIQRHGVVNAFDDEHFAAAVKATGRNNLIIAGVTNDVCTVFPTLTAL
AQGHRVQVVADAGGSPAKIADDTAIHRMDKAGATITSTNQLLAELAENWTTDRGSKIISILMELLPQN
>Mature_228_residues
MKIGRQSNVVHRDPRPIRTTTSTAVPTPRKRPLMTAQPFTADNTAMLLIDHQVGTMGWVGSISFGEMKANALALAKAAKA
LDIPLVLTSSMEEYAQGPLLAELADIAPEEFAARIQRHGVVNAFDDEHFAAAVKATGRNNLIIAGVTNDVCTVFPTLTAL
AQGHRVQVVADAGGSPAKIADDTAIHRMDKAGATITSTNQLLAELAENWTTDRGSKIISILMELLPQN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=171, Percent_Identity=40.9356725146199, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24344; Mature: 24344

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGRQSNVVHRDPRPIRTTTSTAVPTPRKRPLMTAQPFTADNTAMLLIDHQVGTMGWVG
CCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
SISFGEMKANALALAKAAKALDIPLVLTSSMEEYAQGPLLAELADIAPEEFAARIQRHGV
CCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCHHHHHHHCCHHHHHHHHHHCCC
VNAFDDEHFAAAVKATGRNNLIIAGVTNDVCTVFPTLTALAQGHRVQVVADAGGSPAKIA
CCCCCCCHHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
DDTAIHRMDKAGATITSTNQLLAELAENWTTDRGSKIISILMELLPQN
CHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGRQSNVVHRDPRPIRTTTSTAVPTPRKRPLMTAQPFTADNTAMLLIDHQVGTMGWVG
CCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
SISFGEMKANALALAKAAKALDIPLVLTSSMEEYAQGPLLAELADIAPEEFAARIQRHGV
CCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCHHHHHHHCCHHHHHHHHHHCCC
VNAFDDEHFAAAVKATGRNNLIIAGVTNDVCTVFPTLTALAQGHRVQVVADAGGSPAKIA
CCCCCCCHHHEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
DDTAIHRMDKAGATITSTNQLLAELAENWTTDRGSKIISILMELLPQN
CHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]