| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317112
Identifier: 158317112
GI number: 158317112
Start: 6460067
End: 6461125
Strand: Reverse
Name: 158317112
Synonym: Franean1_5356
Alternate gene names: NA
Gene position: 6461125-6460067 (Counterclockwise)
Preceding gene: 158317113
Following gene: 158317109
Centisome position: 71.93
GC content: 69.5
Gene sequence:
>1059_bases GTGTTCCACGTTCTGATCTTGCGCTACCGGGCGGGTGTCGGCCGGGCACCTGCCCTACGGGATGATCATGTCGCATATCT GGACCGGTGCTATGCGGACGGCATGTTTCTGGCGTCTGGGCAGATCCCGCCCGATGCCGGTGAGGTTGTTCTGGCAGTCG GTGGGCGTGGCGACCTCGAGACCGTCGCGGGGCAGGATCCCTTGGTGCGGTCGGGTGTGGCCGACTGGGAGATCCTTACC GTCGATCCGCAACGGGTTCACGAAGATCTGACGGCGTTGCTCGCGCCGGAGCCGGTGGTTGCAGATGCCGGCTGGGACAG CGATGCCCTTCGACAGCTTCGGGCGGCCGGTGTGGACCTGGCCGGGGCGCTCGCCGACCGGCCGATCTCGACGGTGCTCC AGCACGTCGGGCAGGCGCTGCTGGACGGTCTGGCCGCCGGCGAGCCCGGTCTGGCGGCGCAGGCCCGACGGTGCGTGGCG GAGCTACAGGAACGCTGCTGGCCGGGTGACGACATCCTCGTCGGCGAGTTGTCGGCTGCGCTGGGAGAGACGGGCGGTGC CCGGCCTGGGTCGCGATCACGGCCGTTGCAGCCCGTTGCCGTGGATCTGGAAGAACTGGCCGGGTTCCTCGACGGTGACC CCCGCCAGGGCAGCGGTGTCGTCGACCTGTCCACCGGCGTGGTCTGGCCACCGGGTGTCTTCGAGTTCGCCGACGTTCCC GCCGAACTCGACGAGGACAACGAGGAGTTCGACCCGGACCGGTGGCTGTCCTACCGGCCGGACAGCGGCGAGGGCTACCG TGACATGCTCGATTTCACCGAGACGGTGCGCGACGGCCGGTGGAAAGACCGGTTGCGGCATGCCCTCGATGGCCGTGGCG CTTTCCGGCGTTTCCGGGACATTCTCGATGACGCACCCGAAGGCTACCTGCGACGCTGGTACGTCTTCCGGGATGAACGC GCGCTCGGCCGGGCCCGGGCGTTTCTGGCCGCCGAGGGATACCGCGCCACGCCCCCAGGAAGCCACCCTCAGCCGCCCGC GGGACGCAGGACCTCCTGA
Upstream 100 bases:
>100_bases CCCGATCGCGGCGTTGGATCGGGATGGTGGTCGCTGCTCGTGGCAGTCGCGGGTGCGGTCGGGTGGGTCCCGGGTGCCGG GTGGGGTGCACGATGGGAGT
Downstream 100 bases:
>100_bases CAGCGGACACCGATCCGCCGTCAGAGGTTCCCGCACAAGCATCGGCCGCAGGCAACGAGGCGTACACGCTCGTTGCTGCC AGCAACGACAGGACGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MFHVLILRYRAGVGRAPALRDDHVAYLDRCYADGMFLASGQIPPDAGEVVLAVGGRGDLETVAGQDPLVRSGVADWEILT VDPQRVHEDLTALLAPEPVVADAGWDSDALRQLRAAGVDLAGALADRPISTVLQHVGQALLDGLAAGEPGLAAQARRCVA ELQERCWPGDDILVGELSAALGETGGARPGSRSRPLQPVAVDLEELAGFLDGDPRQGSGVVDLSTGVVWPPGVFEFADVP AELDEDNEEFDPDRWLSYRPDSGEGYRDMLDFTETVRDGRWKDRLRHALDGRGAFRRFRDILDDAPEGYLRRWYVFRDER ALGRARAFLAAEGYRATPPGSHPQPPAGRRTS
Sequences:
>Translated_352_residues MFHVLILRYRAGVGRAPALRDDHVAYLDRCYADGMFLASGQIPPDAGEVVLAVGGRGDLETVAGQDPLVRSGVADWEILT VDPQRVHEDLTALLAPEPVVADAGWDSDALRQLRAAGVDLAGALADRPISTVLQHVGQALLDGLAAGEPGLAAQARRCVA ELQERCWPGDDILVGELSAALGETGGARPGSRSRPLQPVAVDLEELAGFLDGDPRQGSGVVDLSTGVVWPPGVFEFADVP AELDEDNEEFDPDRWLSYRPDSGEGYRDMLDFTETVRDGRWKDRLRHALDGRGAFRRFRDILDDAPEGYLRRWYVFRDER ALGRARAFLAAEGYRATPPGSHPQPPAGRRTS >Mature_352_residues MFHVLILRYRAGVGRAPALRDDHVAYLDRCYADGMFLASGQIPPDAGEVVLAVGGRGDLETVAGQDPLVRSGVADWEILT VDPQRVHEDLTALLAPEPVVADAGWDSDALRQLRAAGVDLAGALADRPISTVLQHVGQALLDGLAAGEPGLAAQARRCVA ELQERCWPGDDILVGELSAALGETGGARPGSRSRPLQPVAVDLEELAGFLDGDPRQGSGVVDLSTGVVWPPGVFEFADVP AELDEDNEEFDPDRWLSYRPDSGEGYRDMLDFTETVRDGRWKDRLRHALDGRGAFRRFRDILDDAPEGYLRRWYVFRDER ALGRARAFLAAEGYRATPPGSHPQPPAGRRTS
Specific function: Unknown
COG id: COG2350
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38249; Mature: 38249
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHVLILRYRAGVGRAPALRDDHVAYLDRCYADGMFLASGQIPPDAGEVVLAVGGRGDLE CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCCH TVAGQDPLVRSGVADWEILTVDPQRVHEDLTALLAPEPVVADAGWDSDALRQLRAAGVDL HHCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCH AGALADRPISTVLQHVGQALLDGLAAGEPGLAAQARRCVAELQERCWPGDDILVGELSAA HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH LGETGGARPGSRSRPLQPVAVDLEELAGFLDGDPRQGSGVVDLSTGVVWPPGVFEFADVP HCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHCCC AELDEDNEEFDPDRWLSYRPDSGEGYRDMLDFTETVRDGRWKDRLRHALDGRGAFRRFRD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH ILDDAPEGYLRRWYVFRDERALGRARAFLAAEGYRATPPGSHPQPPAGRRTS HHHCCCHHHHHHHHEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFHVLILRYRAGVGRAPALRDDHVAYLDRCYADGMFLASGQIPPDAGEVVLAVGGRGDLE CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCCCCH TVAGQDPLVRSGVADWEILTVDPQRVHEDLTALLAPEPVVADAGWDSDALRQLRAAGVDL HHCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCH AGALADRPISTVLQHVGQALLDGLAAGEPGLAAQARRCVAELQERCWPGDDILVGELSAA HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH LGETGGARPGSRSRPLQPVAVDLEELAGFLDGDPRQGSGVVDLSTGVVWPPGVFEFADVP HCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHCCC AELDEDNEEFDPDRWLSYRPDSGEGYRDMLDFTETVRDGRWKDRLRHALDGRGAFRRFRD CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH ILDDAPEGYLRRWYVFRDERALGRARAFLAAEGYRATPPGSHPQPPAGRRTS HHHCCCHHHHHHHHEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA