| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317103
Identifier: 158317103
GI number: 158317103
Start: 6447151
End: 6448089
Strand: Reverse
Name: 158317103
Synonym: Franean1_5347
Alternate gene names: NA
Gene position: 6448089-6447151 (Counterclockwise)
Preceding gene: 158317104
Following gene: 158317102
Centisome position: 71.79
GC content: 73.7
Gene sequence:
>939_bases GTGCTGGACGCGTTCTGGGTCGCGATCGGCAGCAAACTGGCCGACCGCTGGGCCGCCGCCGGCGCACCCGCCCTGATCTT CTGGCTCGGCGGACTCGCCGCCTGGTGCCGGCACCGCGGCGGGCTGCACACACTGCGGCAGCAGACTGACTGGCTCGACG CCCAGAGCACCGGTGTGCAGGCGGCCGTCATCCTGGCGGCCAGCCTGGCCGTGCTCAGCTCCGGCCTCGTGGTCGCCCGC CTCGCCACGCCGACGCTGCGACTGCTGGAGGGCTACTGGCCGGCCTGGACGGCCCCGGCCCGCAGCCGCCTCGCCGCCTG GCTGGCCGCACGTGCCGCCGCCGAACAGTCCGCCTGGCAGGAGGCGTACGCCCAGGTATCCGCACCGAACACACCGACCG GCGAACAGCTCGCCGCGTACACCCGCCTGGAACGACGCCGGCGTCGGCGGCCGGCCGCGGCCGGCTACTTCCTGCCGACG CCGATAGGCAACATCCTGCGTGCCGCAGAGCGTCGCCCCCTCGACAAGTACGGCCTCGACGTGGTCATCCTGTGGCCTCG TCTATGGCCCGCGCTTCCGGAGACGACCCGCGCCGACCTGCTTGCCGCCCGGGGCAGCCTGGACGCCGCTGTCACCACCG CGATCTGGGGGGTGCTGTTCTGCGCGTTCACCCCCTTGGCGTGGCCCGCGCTGCCCATCGGACTGGCCGTCGCCGCCGCC AGCGTCGTCGCAGTGGTACCAGCCCGCGCACAGACCTTCGGCGACCTGCTCGAAGCCGCCTTCGACCAGCACCGCTACCT GCTCTATAGCCAGCTGCGCTGGCCGCTTCCGGGGAACCCCGCCGAGGAGCGGGCCTCGGGGCGGCGCCTGACGTGGTACC TCTGGCGGGGATCGAGCGACCCTGATCCCGTGTTCACCCCGCCTACCGGGGCCGGGTGA
Upstream 100 bases:
>100_bases TGCTGTCTGCACGCCGACTACATCTGGTACCAACCTGAGATCGGTAGCCCTGTCCCGACGTGCCCCACCCATCAGACCGC GCTGGTGCGAGGCTGACACC
Downstream 100 bases:
>100_bases GTAAAGAGAACCTGGCCTGGTCGGGGATGATCGTGGGCACCGGGCTGTCGTATTTCGGCACTTTCTGGGGAAACTACAAC GACCTCACCGAAGCTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MLDAFWVAIGSKLADRWAAAGAPALIFWLGGLAAWCRHRGGLHTLRQQTDWLDAQSTGVQAAVILAASLAVLSSGLVVAR LATPTLRLLEGYWPAWTAPARSRLAAWLAARAAAEQSAWQEAYAQVSAPNTPTGEQLAAYTRLERRRRRRPAAAGYFLPT PIGNILRAAERRPLDKYGLDVVILWPRLWPALPETTRADLLAARGSLDAAVTTAIWGVLFCAFTPLAWPALPIGLAVAAA SVVAVVPARAQTFGDLLEAAFDQHRYLLYSQLRWPLPGNPAEERASGRRLTWYLWRGSSDPDPVFTPPTGAG
Sequences:
>Translated_312_residues MLDAFWVAIGSKLADRWAAAGAPALIFWLGGLAAWCRHRGGLHTLRQQTDWLDAQSTGVQAAVILAASLAVLSSGLVVAR LATPTLRLLEGYWPAWTAPARSRLAAWLAARAAAEQSAWQEAYAQVSAPNTPTGEQLAAYTRLERRRRRRPAAAGYFLPT PIGNILRAAERRPLDKYGLDVVILWPRLWPALPETTRADLLAARGSLDAAVTTAIWGVLFCAFTPLAWPALPIGLAVAAA SVVAVVPARAQTFGDLLEAAFDQHRYLLYSQLRWPLPGNPAEERASGRRLTWYLWRGSSDPDPVFTPPTGAG >Mature_312_residues MLDAFWVAIGSKLADRWAAAGAPALIFWLGGLAAWCRHRGGLHTLRQQTDWLDAQSTGVQAAVILAASLAVLSSGLVVAR LATPTLRLLEGYWPAWTAPARSRLAAWLAARAAAEQSAWQEAYAQVSAPNTPTGEQLAAYTRLERRRRRRPAAAGYFLPT PIGNILRAAERRPLDKYGLDVVILWPRLWPALPETTRADLLAARGSLDAAVTTAIWGVLFCAFTPLAWPALPIGLAVAAA SVVAVVPARAQTFGDLLEAAFDQHRYLLYSQLRWPLPGNPAEERASGRRLTWYLWRGSSDPDPVFTPPTGAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33844; Mature: 33844
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDAFWVAIGSKLADRWAAAGAPALIFWLGGLAAWCRHRGGLHTLRQQTDWLDAQSTGVQ CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCHH AAVILAASLAVLSSGLVVARLATPTLRLLEGYWPAWTAPARSRLAAWLAARAAAEQSAWQ HHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EAYAQVSAPNTPTGEQLAAYTRLERRRRRRPAAAGYFLPTPIGNILRAAERRPLDKYGLD HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCC VVILWPRLWPALPETTRADLLAARGSLDAAVTTAIWGVLFCAFTPLAWPALPIGLAVAAA EEEECCHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVAVVPARAQTFGDLLEAAFDQHRYLLYSQLRWPLPGNPAEERASGRRLTWYLWRGSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEEECCCC PDPVFTPPTGAG CCCCCCCCCCCC >Mature Secondary Structure MLDAFWVAIGSKLADRWAAAGAPALIFWLGGLAAWCRHRGGLHTLRQQTDWLDAQSTGVQ CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHCCHH AAVILAASLAVLSSGLVVARLATPTLRLLEGYWPAWTAPARSRLAAWLAARAAAEQSAWQ HHHHHHHHHHHHHCCHHEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH EAYAQVSAPNTPTGEQLAAYTRLERRRRRRPAAAGYFLPTPIGNILRAAERRPLDKYGLD HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCC VVILWPRLWPALPETTRADLLAARGSLDAAVTTAIWGVLFCAFTPLAWPALPIGLAVAAA EEEECCHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVVAVVPARAQTFGDLLEAAFDQHRYLLYSQLRWPLPGNPAEERASGRRLTWYLWRGSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEEECCCC PDPVFTPPTGAG CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA