| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317104
Identifier: 158317104
GI number: 158317104
Start: 6448094
End: 6448522
Strand: Reverse
Name: 158317104
Synonym: Franean1_5348
Alternate gene names: NA
Gene position: 6448522-6448094 (Counterclockwise)
Preceding gene: 158317105
Following gene: 158317103
Centisome position: 71.79
GC content: 71.79
Gene sequence:
>429_bases ATGCCCGCCGAGCTCGACACCAACGGGATCCTCACCGCGGCCCGGGTAATCCGCCCGTACCTGCCGGCCCTCGTGGGCCC TGACGACGCGCCGCTGGTTGACCGGGCCCTCGCCGCGCAGCTCACCTCGGTCTCCCCGCCGGCGACGGTCGCCCACGAGA TCATCATCCTGCTGAACGGACATCCGGTCACCCGCCGCTTCCTGCGCACGGTGCTCGCCGACGCCCCCTCCTACCGCCCG CCCGCCCTGCAGCAGGACCGATTCCGGGTGAGTAGCCGCGGCCTGGGCACGCACCCCGCCGGCGACCCCGCTCCCGTCGA CGCGACACGGTACTGCTGTCTGCACGCCGACTACATCTGGTACCAACCTGAGATCGGTAGCCCTGTCCCGACGTGCCCCA CCCATCAGACCGCGCTGGTGCGAGGCTGA
Upstream 100 bases:
>100_bases GGTGTGGGCGTCCCACATCCATTCCGGGGCCTGAGCCCGCCCCGCCACCTCGCCCTCGCCCCCGCCCCCGCAGGCCCGAC GCACGAAGGACGCGACGTTC
Downstream 100 bases:
>100_bases CACCGTGCTGGACGCGTTCTGGGTCGCGATCGGCAGCAAACTGGCCGACCGCTGGGCCGCCGCCGGCGCACCCGCCCTGA TCTTCTGGCTCGGCGGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPAELDTNGILTAARVIRPYLPALVGPDDAPLVDRALAAQLTSVSPPATVAHEIIILLNGHPVTRRFLRTVLADAPSYRP PALQQDRFRVSSRGLGTHPAGDPAPVDATRYCCLHADYIWYQPEIGSPVPTCPTHQTALVRG
Sequences:
>Translated_142_residues MPAELDTNGILTAARVIRPYLPALVGPDDAPLVDRALAAQLTSVSPPATVAHEIIILLNGHPVTRRFLRTVLADAPSYRP PALQQDRFRVSSRGLGTHPAGDPAPVDATRYCCLHADYIWYQPEIGSPVPTCPTHQTALVRG >Mature_141_residues PAELDTNGILTAARVIRPYLPALVGPDDAPLVDRALAAQLTSVSPPATVAHEIIILLNGHPVTRRFLRTVLADAPSYRPP ALQQDRFRVSSRGLGTHPAGDPAPVDATRYCCLHADYIWYQPEIGSPVPTCPTHQTALVRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15306; Mature: 15174
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAELDTNGILTAARVIRPYLPALVGPDDAPLVDRALAAQLTSVSPPATVAHEIIILLNG CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHCCEEEEEEECC HPVTRRFLRTVLADAPSYRPPALQQDRFRVSSRGLGTHPAGDPAPVDATRYCCLHADYIW CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHEEEEECCEEE YQPEIGSPVPTCPTHQTALVRG ECCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure PAELDTNGILTAARVIRPYLPALVGPDDAPLVDRALAAQLTSVSPPATVAHEIIILLNG CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHCCEEEEEEECC HPVTRRFLRTVLADAPSYRPPALQQDRFRVSSRGLGTHPAGDPAPVDATRYCCLHADYIW CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHEEEEECCEEE YQPEIGSPVPTCPTHQTALVRG ECCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA