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The map label for this gene is ywnB [H]

Identifier: 158317099

GI number: 158317099

Start: 6442693

End: 6443376

Strand: Reverse

Name: ywnB [H]

Synonym: Franean1_5343

Alternate gene names: 158317099

Gene position: 6443376-6442693 (Counterclockwise)

Preceding gene: 158317100

Following gene: 158317098

Centisome position: 71.74

GC content: 65.94

Gene sequence:

>684_bases
ATGAAGGTCGGAGTATTCGGGGCAACAGGAACGATCGGCCGGTGCGTCGTCTCCGAGGCGCTCGCCCGAGGCCATCGGGT
GACGGGGTGGACTCGCGATGTCTCCCGCCTCCCTCCACAGCCGACTCTGGCCCGGTGGGCCCAGGTCGACCTCCTCGACC
CGACGGACGTGGCACGGGTCATCGCGGGGCATGACGTCATCGTCAATGCAATCAATACCGGAAACAGCATTCCGGAAGGC
ATTGCTAACGCCGGGGTTCTGCCCGCCGCCGCCCGCGCCGTGCTCACAGCAATGGAACAGCATCCGGCTACGAGGCTCAT
CGTCGTCGGCGGCGCCGGCAGTCTGGAGGTGGAGCCAGGCCGGCAGATCGTCGACCTGGAGGGCTTCGCGGAAGGCCTGC
CCGCGGCCCTCGGAGTCCCCGCTGACTACGTGAAGGTCGTACTGGCCCACCGGGAGGCCCTGAACCTGTACCGCCTGTCG
AACAGAAATTGGACGTATCTCAGCCCCTCGGCCGGACTGATCACCTCCGGTGAGCGCACCGGCCGCTTCCGGACCGGCAC
CAACCAAATTCTAGTCACAGCGGCGGGCACGAGCGACATATCCGCCGAGGACCTCGCAGTAGCCATCGTCGATGAGGTCG
AGGATCCACGCCATATCCAGCGGCGATTCACCGTCGGCTATTGA

Upstream 100 bases:

>100_bases
GAGAGGCACCCCCGTCTACCCCGTGACCCTTCTGGACCTTGTCCAGGAACCACACACCGCCAGTAGGTATGCAGCGCGCA
GAGAACATGGAGGAGAGAAA

Downstream 100 bases:

>100_bases
AAGGTCGAGGTGGGCAGTGCGGTCGAATCGTGTCGACCGTCACGAGAATCTACCCGGTGGCGGCCGTGAGGGATCCCGCT
GGTGGCCAGTAGAGAAAATT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKVGVFGATGTIGRCVVSEALARGHRVTGWTRDVSRLPPQPTLARWAQVDLLDPTDVARVIAGHDVIVNAINTGNSIPEG
IANAGVLPAAARAVLTAMEQHPATRLIVVGGAGSLEVEPGRQIVDLEGFAEGLPAALGVPADYVKVVLAHREALNLYRLS
NRNWTYLSPSAGLITSGERTGRFRTGTNQILVTAAGTSDISAEDLAVAIVDEVEDPRHIQRRFTVGY

Sequences:

>Translated_227_residues
MKVGVFGATGTIGRCVVSEALARGHRVTGWTRDVSRLPPQPTLARWAQVDLLDPTDVARVIAGHDVIVNAINTGNSIPEG
IANAGVLPAAARAVLTAMEQHPATRLIVVGGAGSLEVEPGRQIVDLEGFAEGLPAALGVPADYVKVVLAHREALNLYRLS
NRNWTYLSPSAGLITSGERTGRFRTGTNQILVTAAGTSDISAEDLAVAIVDEVEDPRHIQRRFTVGY
>Mature_227_residues
MKVGVFGATGTIGRCVVSEALARGHRVTGWTRDVSRLPPQPTLARWAQVDLLDPTDVARVIAGHDVIVNAINTGNSIPEG
IANAGVLPAAARAVLTAMEQHPATRLIVVGGAGSLEVEPGRQIVDLEGFAEGLPAALGVPADYVKVVLAHREALNLYRLS
NRNWTYLSPSAGLITSGERTGRFRTGTNQILVTAAGTSDISAEDLAVAIVDEVEDPRHIQRRFTVGY

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 24031; Mature: 24031

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGVFGATGTIGRCVVSEALARGHRVTGWTRDVSRLPPQPTLARWAQVDLLDPTDVARV
CEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHEEECCCHHHHHHH
IAGHDVIVNAINTGNSIPEGIANAGVLPAAARAVLTAMEQHPATRLIVVGGAGSLEVEPG
HCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCC
RQIVDLEGFAEGLPAALGVPADYVKVVLAHREALNLYRLSNRNWTYLSPSAGLITSGERT
CEEEECCHHHHCCCHHHCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCEEECCCCC
GRFRTGTNQILVTAAGTSDISAEDLAVAIVDEVEDPRHIQRRFTVGY
CCEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKVGVFGATGTIGRCVVSEALARGHRVTGWTRDVSRLPPQPTLARWAQVDLLDPTDVARV
CEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHEEECCCHHHHHHH
IAGHDVIVNAINTGNSIPEGIANAGVLPAAARAVLTAMEQHPATRLIVVGGAGSLEVEPG
HCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEECCC
RQIVDLEGFAEGLPAALGVPADYVKVVLAHREALNLYRLSNRNWTYLSPSAGLITSGERT
CEEEECCHHHHCCCHHHCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCEEECCCCC
GRFRTGTNQILVTAAGTSDISAEDLAVAIVDEVEDPRHIQRRFTVGY
CCEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]