| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317100
Identifier: 158317100
GI number: 158317100
Start: 6443510
End: 6444568
Strand: Reverse
Name: 158317100
Synonym: Franean1_5344
Alternate gene names: NA
Gene position: 6444568-6443510 (Counterclockwise)
Preceding gene: 158317102
Following gene: 158317099
Centisome position: 71.75
GC content: 70.63
Gene sequence:
>1059_bases ATGCCCCTGCATGTGATCACCGGTGCCGGTGGCACCGGAGCCCCCACCGCCGAACTGTTGGCCCGGCAGGGTGATCGCGT CCGACTGGTCAGCCGGCGCGGGGGCGGACCCGAGCACCCACTGATCGAGCGGATCGCCGCCGACGCGACCGACGCCGACG CGCTGACCCGACTCGCCGAGGGCGCGACGACGCTGATCAACACCGCGATGCCGCCGTACGACCGGTGGCCGGACGAGTTC CCACCGCTCGCGACGGCGCTGCTGGACGCGGCTGAACGCACCGGCGCCGGCTACGTGATGATGGGCAACACCTACGGCTA CGGCATCGTCAACGGCCGCTTCACCGAAGATCTACCGATGGCACCGGTATCCGCCAAAGGTCAGGTACGGGCCCGGATGT GGAGCGACGCCCTCGAGGCGCACCGCGCGGGTCGAGCCCGCGTGACCGAGGTCCGGGCCTCGGCGTTTCTGGGCGCCGGG GCCGGTTCGCTGTACAACTTCACGGTGGCGCCCCTCGTCCTGCGCGGCGAGCCGGCAGCCTTCCCCGGCGACCTGGACGC CCCGAAAACCTGGTCCTACGTCGGGGACGCCGCCCGAACCCTGGCCGCCGTGGCCCTCTCCGGCGACGACCTTGCGTGGG GACGGGCGTGGCACGTGCCCTCCACCGCGGCCTTGTCCGTGCGGGAGCTGACCACGCGGCTCGCGACCGCCGCCGGGGCG CCCGCACCCATCCTGACGGCGATGTCCACCGATCAGCTCGCCGCGACCGGAGCCGTGAACCCGATCATGCGGGAAGTCAT CGAGATGATGTACTCCCTGGAACAGCCCGACCTGCTCGACTCCACCCTCACCGAGCAGACGTTCCGCCTCGCCCCGACCC CCCTCGAGACCGTCCTGGCTGAAACCGTCAGCGCCTACGGACCTGTACCTGACCAGACCCTGACCACCTGTACCAGACCA GACCAGAACGGTCGGCAGAATTCCGGGTCGGCACCGACCGCATCTCGCCGGCAATCAGACGGTCACGTCGGCGACAGTAC CGCCGTCCGGGGAACGTAA
Upstream 100 bases:
>100_bases ATATGTGGCATTCAGGCCACTACCGTATGTTTCCGGCGGGCGGCAGGGTGAGACAGGTACCCGCGAACCGCGCGGGCCCG CCGAGCGGAAGACGAACACC
Downstream 100 bases:
>100_bases TCCCGTCTGCGGTGCGGCTCTGGCTGCACTCCGGAGAGGCACCCCCGTCTACCCCGTGACCCTTCTGGACCTTGTCCAGG AACCACACACCGCCAGTAGG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MPLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAEGATTLINTAMPPYDRWPDEF PPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPMAPVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAG AGSLYNFTVAPLVLRGEPAAFPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLAETVSAYGPVPDQTLTTCTRP DQNGRQNSGSAPTASRRQSDGHVGDSTAVRGT
Sequences:
>Translated_352_residues MPLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAEGATTLINTAMPPYDRWPDEF PPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPMAPVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAG AGSLYNFTVAPLVLRGEPAAFPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLAETVSAYGPVPDQTLTTCTRP DQNGRQNSGSAPTASRRQSDGHVGDSTAVRGT >Mature_351_residues PLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAEGATTLINTAMPPYDRWPDEFP PLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPMAPVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAGA GSLYNFTVAPLVLRGEPAAFPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGAP APILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLAETVSAYGPVPDQTLTTCTRPD QNGRQNSGSAPTASRRQSDGHVGDSTAVRGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36961; Mature: 36830
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAE CCEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHH GATTLINTAMPPYDRWPDEFPPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPM HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCC APVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAGAGSLYNFTVAPLVLRGEPAA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC FPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA CCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCC PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLA CCCEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH ETVSAYGPVPDQTLTTCTRPDQNGRQNSGSAPTASRRQSDGHVGDSTAVRGT HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLHVITGAGGTGAPTAELLARQGDRVRLVSRRGGGPEHPLIERIAADATDADALTRLAE CEEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHH GATTLINTAMPPYDRWPDEFPPLATALLDAAERTGAGYVMMGNTYGYGIVNGRFTEDLPM HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCC APVSAKGQVRARMWSDALEAHRAGRARVTEVRASAFLGAGAGSLYNFTVAPLVLRGEPAA CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC FPGDLDAPKTWSYVGDAARTLAAVALSGDDLAWGRAWHVPSTAALSVRELTTRLATAAGA CCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCC PAPILTAMSTDQLAATGAVNPIMREVIEMMYSLEQPDLLDSTLTEQTFRLAPTPLETVLA CCCEEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH ETVSAYGPVPDQTLTTCTRPDQNGRQNSGSAPTASRRQSDGHVGDSTAVRGT HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA