| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fbpA [H]
Identifier: 158317096
GI number: 158317096
Start: 6437373
End: 6438449
Strand: Reverse
Name: fbpA [H]
Synonym: Franean1_5340
Alternate gene names: 158317096
Gene position: 6438449-6437373 (Counterclockwise)
Preceding gene: 158317097
Following gene: 158317095
Centisome position: 71.68
GC content: 68.52
Gene sequence:
>1077_bases GTGCCACACCGTCACGCGCGCACGCCAGACCCGTCCGGTCTGTGCTCAGGGAAAGGGAGTCTGATGGGCAGGGCGAGAAG AGCGCTGGCCGTGCTGGCGACGGCCATCCTCGTGGGGGGCCTGTCGGCGGCGTGCGGCGGGGATGACGGGAAGACGCTCA CGCTCTACAACGCGCAGCATCGGGACCTGATGCAGGTGCTGGTCGACGCGTTCACCAAGGAGACCGGCATCAAGGTCGAG ATGCGTAACGGCGGTGACGCGGAGCTTGCGAACCAGATCGTCCAGGAGGGCGACAGCTCGCCCGCGGATCTGTTCGCCAC CGAGAACTCGCCGGCCATGACGCTGGTCGACCGGGCTGGCGGGTTCAGCCCGCTCGACCAGGCCACCCTCGACCAGATGC CCGACCAGTACGTCCCGAGCTCCGGCACCTGGGTCGGCTTCGCGGCGCGGTCGACGGTGTTCATCTACAACCGCGACCAG GTCGACAAGGACGCGCTACCAACGTCGATCATGGATCTGGCCCGGCCGGAGTGGCAGGGTCGAGTGGGCGTCGCGGCCGG TGGCGCCGACTTCCAGGCCATCGTCAGCGCTGTGCTCGCGGTGGAGGGCGAGGACGCTGCCGCCGACTGGCTCGCCGGAC TGAAGCGCAACGCCAAGATCTACGACAACAACATCGCCGCGCTGCGTGCCGTGAACGCCGGCGAGGTGCCCGCCGCCGTG ATCTACCACTACTACTGGTACCAGGACCAGGCGGAGTCGGGAGAGATCAGCAGGAACGTCGACCTGCACTTCTTCGGGAA CCAGGACGCGGGCGCGTTCCTCAGCGTCTCCGGCGTCGGCGTGATCGCGGCCAGCGACCAGCAGGCCGAGGCGCAGCAAC TGGTCAGGTTCCTCACCAGCGAAGCCGGGCAGCGGGCGCTCGTCGACAGCGGCGCCCTGGAGTACGCCGTGTCGGACAAG GCCCCCACAAACCCCGCGCTGACGCCCCTGGCGGACCTCGACGCACCGCACATCGACATCTCGACCCTGAACGGCCCGAA GGTCATCGAGCTGATGCAGCAGGCGGGTCTGCTCTGA
Upstream 100 bases:
>100_bases CTGCTGCTTTGCGCGTTTCATCCATGTGTATGCGCAGGTAGAAGGGGGTGGCGACGGCTGCGCCGCGACGAGTTGGCGCC GCTGGACGCAGCTCCCGCGG
Downstream 100 bases:
>100_bases CCAGCCATCTCACAGCTGGGGTGCGGCGCCCGCGCGCCGGGGTGTACCCACGCCCGCTGCTGCTCGCCTGCATGCTCGTC GCGCTGCTCGCGGCCGTCCC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: Iron(III)-binding periplasmic protein [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MPHRHARTPDPSGLCSGKGSLMGRARRALAVLATAILVGGLSAACGGDDGKTLTLYNAQHRDLMQVLVDAFTKETGIKVE MRNGGDAELANQIVQEGDSSPADLFATENSPAMTLVDRAGGFSPLDQATLDQMPDQYVPSSGTWVGFAARSTVFIYNRDQ VDKDALPTSIMDLARPEWQGRVGVAAGGADFQAIVSAVLAVEGEDAAADWLAGLKRNAKIYDNNIAALRAVNAGEVPAAV IYHYYWYQDQAESGEISRNVDLHFFGNQDAGAFLSVSGVGVIAASDQQAEAQQLVRFLTSEAGQRALVDSGALEYAVSDK APTNPALTPLADLDAPHIDISTLNGPKVIELMQQAGLL
Sequences:
>Translated_358_residues MPHRHARTPDPSGLCSGKGSLMGRARRALAVLATAILVGGLSAACGGDDGKTLTLYNAQHRDLMQVLVDAFTKETGIKVE MRNGGDAELANQIVQEGDSSPADLFATENSPAMTLVDRAGGFSPLDQATLDQMPDQYVPSSGTWVGFAARSTVFIYNRDQ VDKDALPTSIMDLARPEWQGRVGVAAGGADFQAIVSAVLAVEGEDAAADWLAGLKRNAKIYDNNIAALRAVNAGEVPAAV IYHYYWYQDQAESGEISRNVDLHFFGNQDAGAFLSVSGVGVIAASDQQAEAQQLVRFLTSEAGQRALVDSGALEYAVSDK APTNPALTPLADLDAPHIDISTLNGPKVIELMQQAGLL >Mature_357_residues PHRHARTPDPSGLCSGKGSLMGRARRALAVLATAILVGGLSAACGGDDGKTLTLYNAQHRDLMQVLVDAFTKETGIKVEM RNGGDAELANQIVQEGDSSPADLFATENSPAMTLVDRAGGFSPLDQATLDQMPDQYVPSSGTWVGFAARSTVFIYNRDQV DKDALPTSIMDLARPEWQGRVGVAAGGADFQAIVSAVLAVEGEDAAADWLAGLKRNAKIYDNNIAALRAVNAGEVPAAVI YHYYWYQDQAESGEISRNVDLHFFGNQDAGAFLSVSGVGVIAASDQQAEAQQLVRFLTSEAGQRALVDSGALEYAVSDKA PTNPALTPLADLDAPHIDISTLNGPKVIELMQQAGLL
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. This protein specifically binds Fe(3+) and is involved in its transmembrane transport [H]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37828; Mature: 37696
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS01037 SBP_BACTERIAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRHARTPDPSGLCSGKGSLMGRARRALAVLATAILVGGLSAACGGDDGKTLTLYNAQH CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECCCH RDLMQVLVDAFTKETGIKVEMRNGGDAELANQIVQEGDSSPADLFATENSPAMTLVDRAG HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCC GFSPLDQATLDQMPDQYVPSSGTWVGFAARSTVFIYNRDQVDKDALPTSIMDLARPEWQG CCCCCHHHHHHHCCHHHCCCCCCEEEEEECCEEEEEECCCCCHHHCCHHHHHHCCCCCCC RVGVAAGGADFQAIVSAVLAVEGEDAAADWLAGLKRNAKIYDNNIAALRAVNAGEVPAAV CEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCHHH IYHYYWYQDQAESGEISRNVDLHFFGNQDAGAFLSVSGVGVIAASDQQAEAQQLVRFLTS HEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCHHHHHHHHHHHHH EAGQRALVDSGALEYAVSDKAPTNPALTPLADLDAPHIDISTLNGPKVIELMQQAGLL HCCCEEHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHCCC >Mature Secondary Structure PHRHARTPDPSGLCSGKGSLMGRARRALAVLATAILVGGLSAACGGDDGKTLTLYNAQH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEECCCH RDLMQVLVDAFTKETGIKVEMRNGGDAELANQIVQEGDSSPADLFATENSPAMTLVDRAG HHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCC GFSPLDQATLDQMPDQYVPSSGTWVGFAARSTVFIYNRDQVDKDALPTSIMDLARPEWQG CCCCCHHHHHHHCCHHHCCCCCCEEEEEECCEEEEEECCCCCHHHCCHHHHHHCCCCCCC RVGVAAGGADFQAIVSAVLAVEGEDAAADWLAGLKRNAKIYDNNIAALRAVNAGEVPAAV CEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCHHH IYHYYWYQDQAESGEISRNVDLHFFGNQDAGAFLSVSGVGVIAASDQQAEAQQLVRFLTS HEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCHHHHHHHHHHHHH EAGQRALVDSGALEYAVSDKAPTNPALTPLADLDAPHIDISTLNGPKVIELMQQAGLL HCCCEEHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]