| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fbpB [H]
Identifier: 158317095
GI number: 158317095
Start: 6435823
End: 6437352
Strand: Reverse
Name: fbpB [H]
Synonym: Franean1_5339
Alternate gene names: 158317095
Gene position: 6437352-6435823 (Counterclockwise)
Preceding gene: 158317096
Following gene: 158317094
Centisome position: 71.67
GC content: 73.86
Gene sequence:
>1530_bases GTGCGGCGCCCGCGCGCCGGGGTGTACCCACGCCCGCTGCTGCTCGCCTGCATGCTCGTCGCGCTGCTCGCGGCCGTCCC GCTCTTCTTCGTCGTGGGGTACACGATCAGCGTGGGCTGGTCGGAGGCATGGCGGCTGCTCGTCCGGCCCAGGGTGGGCG AGCTGCTCGTCAACACCACCGAGCTCGCGGTCGGCGGAATGGCCACCAGCGCCATCGTCGGAACGGCCGCCGCCTGGCTT GTCGAGCGCACGGACCTGCCAGGCCGGCGGGTCTGGCACGTGCTGCTCGCCACGCCGCTGGCGGTCCCGGCGTTCGTCGT CAGTTTCGGGTGGGTCTCCCTGGCCTCGGGCGTGGAGGGATACCCGGGCGCCCTGCTGATCGTCACGCTCGCCTACTACC CGCTGGTCTACCTCCCCGTCGGCGCGGCCCTGCGGGGTCTGGACCCGGCACTGGAGGAGTCCGCCCGCTCGCTCGGGCTC GGCCCGTGGCGGACGTTCGCCCGGGTCGTCCTCCCGCAGTTGCGCCCCGCCCTCCTCGGCGGGGCGCTGCTGGTGGGCCT GCACCTGCTCGCCGAGTTCGGCGCCCTGCAGATGCTGCGGTTCCCCACCTTCACCACCGCCATCTACGACCAGTACCGCT CATCGTTCAACGGCCCGGCGGCGAACATGCTCGCCAGTGTCCTGGTGCTGTACTGCGGGGTCCTGGTGGTCGCGGAACTG GGCCTGCGCGGCCGCCACCGCTACGCCCGGCTCGGCCCGGGAAGCAGCCGCCCGGCGGTTCCGGCCCGGCTCGGCCGGCT CACCGTGCCCGCCCTGGCCGGGGTCGCCGCGGTCGTCGTCCTGGCACTGGGCATACCGCTGGCGAGCATCATCCGCTGGC TGGTGGTGGGGGCGTCCACCGCCTTCCCCGCGGCCGACCTCGCCACCGCCACGGCCAGCGCGGCCGGCCTCGGTGTCGCC GGCGCCCTGACCACGGTGGTGCTGGCGCTCCCCGTCGCCTGGCTCAGCGTGCGTCATCCGAGCCGGATCGCGACGCTGCT CGAACGGAGCACCTACACCGCCAACGCGCTCCCGGGCATCGTCGTCGCTCTTGCCCTGGTCACGGTCTCCCTGCAGGTCC TGCCAGCCGTCTACCAGACCACCACGCTCCTGGTCGCCGCCTATTCGATCATGTTCCTGCCGCGTGCCACCGTCGCGGCG CGGGCCGCGATCGCCCAGGCACCGCCCGTCCTCGACGACGTGGCGCGCGCCCTCGGAATCCGGCCGGCGCAGGTCTGGTG GCGGGTCACCCTGCCCCTGATCGCCCCGGGCGCCGGCGCCGGCGCGATCCTCGTCTTCCTCGCCGTGGTCACCGAGCTCA CCGCGACACTGCTGCTGGCCCCGACCGGCACCCAGACCCTGGCGACCGAGTTCTGGAACCACACCCGCGACATCGACTAC GGAGCCGCGGCCCCGTACGCCGGGCTGATGGTGCTGCTGTCAGCACCGGCGACCTACCTGCTCACCCGGTCCGCCCGGAG TGGCCCTTGA
Upstream 100 bases:
>100_bases TCGACGCACCGCACATCGACATCTCGACCCTGAACGGCCCGAAGGTCATCGAGCTGATGCAGCAGGCGGGTCTGCTCTGA CCAGCCATCTCACAGCTGGG
Downstream 100 bases:
>100_bases CCCGGAGAGGCGCATGACCGCGTTGACCGTCAGCCAGGTGACCAAGAGGTTCGGTGACACCACCGCGCTCGCCGGCGTAG ACCTCGACGTGCCCGACGGC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein sfuB [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MRRPRAGVYPRPLLLACMLVALLAAVPLFFVVGYTISVGWSEAWRLLVRPRVGELLVNTTELAVGGMATSAIVGTAAAWL VERTDLPGRRVWHVLLATPLAVPAFVVSFGWVSLASGVEGYPGALLIVTLAYYPLVYLPVGAALRGLDPALEESARSLGL GPWRTFARVVLPQLRPALLGGALLVGLHLLAEFGALQMLRFPTFTTAIYDQYRSSFNGPAANMLASVLVLYCGVLVVAEL GLRGRHRYARLGPGSSRPAVPARLGRLTVPALAGVAAVVVLALGIPLASIIRWLVVGASTAFPAADLATATASAAGLGVA GALTTVVLALPVAWLSVRHPSRIATLLERSTYTANALPGIVVALALVTVSLQVLPAVYQTTTLLVAAYSIMFLPRATVAA RAAIAQAPPVLDDVARALGIRPAQVWWRVTLPLIAPGAGAGAILVFLAVVTELTATLLLAPTGTQTLATEFWNHTRDIDY GAAAPYAGLMVLLSAPATYLLTRSARSGP
Sequences:
>Translated_509_residues MRRPRAGVYPRPLLLACMLVALLAAVPLFFVVGYTISVGWSEAWRLLVRPRVGELLVNTTELAVGGMATSAIVGTAAAWL VERTDLPGRRVWHVLLATPLAVPAFVVSFGWVSLASGVEGYPGALLIVTLAYYPLVYLPVGAALRGLDPALEESARSLGL GPWRTFARVVLPQLRPALLGGALLVGLHLLAEFGALQMLRFPTFTTAIYDQYRSSFNGPAANMLASVLVLYCGVLVVAEL GLRGRHRYARLGPGSSRPAVPARLGRLTVPALAGVAAVVVLALGIPLASIIRWLVVGASTAFPAADLATATASAAGLGVA GALTTVVLALPVAWLSVRHPSRIATLLERSTYTANALPGIVVALALVTVSLQVLPAVYQTTTLLVAAYSIMFLPRATVAA RAAIAQAPPVLDDVARALGIRPAQVWWRVTLPLIAPGAGAGAILVFLAVVTELTATLLLAPTGTQTLATEFWNHTRDIDY GAAAPYAGLMVLLSAPATYLLTRSARSGP >Mature_509_residues MRRPRAGVYPRPLLLACMLVALLAAVPLFFVVGYTISVGWSEAWRLLVRPRVGELLVNTTELAVGGMATSAIVGTAAAWL VERTDLPGRRVWHVLLATPLAVPAFVVSFGWVSLASGVEGYPGALLIVTLAYYPLVYLPVGAALRGLDPALEESARSLGL GPWRTFARVVLPQLRPALLGGALLVGLHLLAEFGALQMLRFPTFTTAIYDQYRSSFNGPAANMLASVLVLYCGVLVVAEL GLRGRHRYARLGPGSSRPAVPARLGRLTVPALAGVAAVVVLALGIPLASIIRWLVVGASTAFPAADLATATASAAGLGVA GALTTVVLALPVAWLSVRHPSRIATLLERSTYTANALPGIVVALALVTVSLQVLPAVYQTTTLLVAAYSIMFLPRATVAA RAAIAQAPPVLDDVARALGIRPAQVWWRVTLPLIAPGAGAGAILVFLAVVTELTATLLLAPTGTQTLATEFWNHTRDIDY GAAAPYAGLMVLLSAPATYLLTRSARSGP
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=213, Percent_Identity=30.5164319248826, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 53259; Mature: 53259
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPRAGVYPRPLLLACMLVALLAAVPLFFVVGYTISVGWSEAWRLLVRPRVGELLVNTT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH ELAVGGMATSAIVGTAAAWLVERTDLPGRRVWHVLLATPLAVPAFVVSFGWVSLASGVEG HHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YPGALLIVTLAYYPLVYLPVGAALRGLDPALEESARSLGLGPWRTFARVVLPQLRPALLG CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GALLVGLHLLAEFGALQMLRFPTFTTAIYDQYRSSFNGPAANMLASVLVLYCGVLVVAEL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GLRGRHRYARLGPGSSRPAVPARLGRLTVPALAGVAAVVVLALGIPLASIIRWLVVGAST CCCCCCCEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC AFPAADLATATASAAGLGVAGALTTVVLALPVAWLSVRHPSRIATLLERSTYTANALPGI CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH VVALALVTVSLQVLPAVYQTTTLLVAAYSIMFLPRATVAARAAIAQAPPVLDDVARALGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCC RPAQVWWRVTLPLIAPGAGAGAILVFLAVVTELTATLLLAPTGTQTLATEFWNHTRDIDY CHHHHHEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC GAAAPYAGLMVLLSAPATYLLTRSARSGP CCCCHHHHHHHHHHCCHHHHHCCCCCCCC >Mature Secondary Structure MRRPRAGVYPRPLLLACMLVALLAAVPLFFVVGYTISVGWSEAWRLLVRPRVGELLVNTT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH ELAVGGMATSAIVGTAAAWLVERTDLPGRRVWHVLLATPLAVPAFVVSFGWVSLASGVEG HHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YPGALLIVTLAYYPLVYLPVGAALRGLDPALEESARSLGLGPWRTFARVVLPQLRPALLG CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GALLVGLHLLAEFGALQMLRFPTFTTAIYDQYRSSFNGPAANMLASVLVLYCGVLVVAEL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GLRGRHRYARLGPGSSRPAVPARLGRLTVPALAGVAAVVVLALGIPLASIIRWLVVGAST CCCCCCCEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC AFPAADLATATASAAGLGVAGALTTVVLALPVAWLSVRHPSRIATLLERSTYTANALPGI CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH VVALALVTVSLQVLPAVYQTTTLLVAAYSIMFLPRATVAARAAIAQAPPVLDDVARALGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCC RPAQVWWRVTLPLIAPGAGAGAILVFLAVVTELTATLLLAPTGTQTLATEFWNHTRDIDY CHHHHHEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC GAAAPYAGLMVLLSAPATYLLTRSARSGP CCCCHHHHHHHHHHCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]