| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317087
Identifier: 158317087
GI number: 158317087
Start: 6421387
End: 6421848
Strand: Reverse
Name: 158317087
Synonym: Franean1_5331
Alternate gene names: NA
Gene position: 6421848-6421387 (Counterclockwise)
Preceding gene: 158317090
Following gene: 158317085
Centisome position: 71.5
GC content: 70.56
Gene sequence:
>462_bases ATGACCTCCTCGGGCATGCCCGGTCCGTTCCTGCCACCGGTGCCGGCTGGGGAGGGTGACGCAGAGAGCACGAGGGAGAA GCTGCCGGCGGTCGTGATGCTGCCGTGGGGTGCGGAGGAGTGGGCGGTCGTCGTCCAGCCGGGTTCGGATTCCGAAGATC TCCTGCGGGCGGTGGCGCGGATGCCCGGCGGGCTGAAGTTCACCGAGTCGTTCGGCGATGTGGATGTGGTGCTCGTGTAC CGGGTGCCCGCTGGCGACCGCGCGCCGGTTGGGAAAGACGGTTCGGGGCCCTCGCGGCGAGGCTGTGCGGGTGCGGCGCT ACGGACGGCGATGGATGCGCACCCGGCACGGCCTGACTCGCGCTGGATGACCAAGGGGGAGCGGACTGCGTTCCGGGCCG GCCAGGTGGAGGCGCTCGAATCGGTTCGCAGGGCCGTGCTCCACGCAATCGACGTTTCGTAG
Upstream 100 bases:
>100_bases CCCCGCTGCGGTTCTTCGTCCACGACACGCGGCCACCGGCCGTGGACTGGACCAGGTTCGATGACCTCGTGACGCGCTTC GCGGACCACCGGCGGTGGAC
Downstream 100 bases:
>100_bases ACCCCGCGTGGTCGACTGCTGCATGGCCACGCTATGAAGCCTGCAGACCATCAGACTGAAAGGGCAACCCGAATCAAGTG GATGCATGGCTTCAGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTSSGMPGPFLPPVPAGEGDAESTREKLPAVVMLPWGAEEWAVVVQPGSDSEDLLRAVARMPGGLKFTESFGDVDVVLVY RVPAGDRAPVGKDGSGPSRRGCAGAALRTAMDAHPARPDSRWMTKGERTAFRAGQVEALESVRRAVLHAIDVS
Sequences:
>Translated_153_residues MTSSGMPGPFLPPVPAGEGDAESTREKLPAVVMLPWGAEEWAVVVQPGSDSEDLLRAVARMPGGLKFTESFGDVDVVLVY RVPAGDRAPVGKDGSGPSRRGCAGAALRTAMDAHPARPDSRWMTKGERTAFRAGQVEALESVRRAVLHAIDVS >Mature_152_residues TSSGMPGPFLPPVPAGEGDAESTREKLPAVVMLPWGAEEWAVVVQPGSDSEDLLRAVARMPGGLKFTESFGDVDVVLVYR VPAGDRAPVGKDGSGPSRRGCAGAALRTAMDAHPARPDSRWMTKGERTAFRAGQVEALESVRRAVLHAIDVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16136; Mature: 16005
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSGMPGPFLPPVPAGEGDAESTREKLPAVVMLPWGAEEWAVVVQPGSDSEDLLRAVAR CCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHH MPGGLKFTESFGDVDVVLVYRVPAGDRAPVGKDGSGPSRRGCAGAALRTAMDAHPARPDS CCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC RWMTKGERTAFRAGQVEALESVRRAVLHAIDVS HHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSSGMPGPFLPPVPAGEGDAESTREKLPAVVMLPWGAEEWAVVVQPGSDSEDLLRAVAR CCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHH MPGGLKFTESFGDVDVVLVYRVPAGDRAPVGKDGSGPSRRGCAGAALRTAMDAHPARPDS CCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC RWMTKGERTAFRAGQVEALESVRRAVLHAIDVS HHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA