| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317090
Identifier: 158317090
GI number: 158317090
Start: 6423666
End: 6424214
Strand: Reverse
Name: 158317090
Synonym: Franean1_5334
Alternate gene names: NA
Gene position: 6424214-6423666 (Counterclockwise)
Preceding gene: 158317091
Following gene: 158317087
Centisome position: 71.52
GC content: 69.95
Gene sequence:
>549_bases GTGGATGTAGCGGTTGCTGAGCGGTTGGCGAGCGAGCTGCTGACCCCGTTGGGGGATCGGTGGCGGCATGTCCAGGCCGT GGCTGCGGCTGCCCGTGAGGTATCCGCAGCTGTCGATCCCGAAGAGCGTGACCTGCTCATAGCGGCGGCCTGGCTGCACG ACATCGGGTACGCCCCGCCGATCGCGCATCTGCGGTTCCACCCGGTGGACGGCGCCCGGTTCCTCGAAACCCAGGACGCC CCGGAGCGGCTGTGTGCTCTGGTCGCCCACCACTCGTGCGCCCGGTATGAAGCCGAGGAGCGGGGCCTGACGGCGGAGCT GTCAGCGTGGGAGCTGGAGGTCTCACCGGTGATGGACGCGCTGTGCGCGGCGGACATGACGACGGGTCCGCAGGGCCAGC GGTTCACCTTTGCTGAACGGATCGCGGAGATCCTCGCTCGCTACGGCGAGGGGTCGGTCGTGCACCGGTCGGTCACTCGG GCGCGGCCGGATCTCCAAACCACCGTCGAGCGCACCACCGCGCGGCTTGCGGCGGCTCAGCCAAGGTAG
Upstream 100 bases:
>100_bases CGCGGCGCGGCCGGCGCCGCACTCTTGATCATAAAACGAGCATTTCGGCAGTCTCGGGCTCTCGCTGACGGCCTGGTGGT GGTCGCCGTACCGTGATCGG
Downstream 100 bases:
>100_bases GGCGTCGCGCGGTTCTCCAGGTAGTGATCGATCCTGAGTCGCATCGACGGGTGGATGTTCAGCGTGTCCAGGTCCTCGGG TGCGACGAACTGGACCTCCT
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Hydrolase; Metal Dependent Phophohydrolase; HAD-Superfamily Hydrolase Subfamily IIB
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MDVAVAERLASELLTPLGDRWRHVQAVAAAAREVSAAVDPEERDLLIAAAWLHDIGYAPPIAHLRFHPVDGARFLETQDA PERLCALVAHHSCARYEAEERGLTAELSAWELEVSPVMDALCAADMTTGPQGQRFTFAERIAEILARYGEGSVVHRSVTR ARPDLQTTVERTTARLAAAQPR
Sequences:
>Translated_182_residues MDVAVAERLASELLTPLGDRWRHVQAVAAAAREVSAAVDPEERDLLIAAAWLHDIGYAPPIAHLRFHPVDGARFLETQDA PERLCALVAHHSCARYEAEERGLTAELSAWELEVSPVMDALCAADMTTGPQGQRFTFAERIAEILARYGEGSVVHRSVTR ARPDLQTTVERTTARLAAAQPR >Mature_182_residues MDVAVAERLASELLTPLGDRWRHVQAVAAAAREVSAAVDPEERDLLIAAAWLHDIGYAPPIAHLRFHPVDGARFLETQDA PERLCALVAHHSCARYEAEERGLTAELSAWELEVSPVMDALCAADMTTGPQGQRFTFAERIAEILARYGEGSVVHRSVTR ARPDLQTTVERTTARLAAAQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19957; Mature: 19957
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVAVAERLASELLTPLGDRWRHVQAVAAAAREVSAAVDPEERDLLIAAAWLHDIGYAPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC IAHLRFHPVDGARFLETQDAPERLCALVAHHSCARYEAEERGLTAELSAWELEVSPVMDA CCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHEEEHHHHHHH LCAADMTTGPQGQRFTFAERIAEILARYGEGSVVHRSVTRARPDLQTTVERTTARLAAAQ HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC PR CC >Mature Secondary Structure MDVAVAERLASELLTPLGDRWRHVQAVAAAAREVSAAVDPEERDLLIAAAWLHDIGYAPP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC IAHLRFHPVDGARFLETQDAPERLCALVAHHSCARYEAEERGLTAELSAWELEVSPVMDA CCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHEEEHHHHHHH LCAADMTTGPQGQRFTFAERIAEILARYGEGSVVHRSVTRARPDLQTTVERTTARLAAAQ HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC PR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA