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The map label for this gene is ybjT [H]

Identifier: 158317070

GI number: 158317070

Start: 6398904

End: 6400625

Strand: Direct

Name: ybjT [H]

Synonym: Franean1_5314

Alternate gene names: 158317070

Gene position: 6398904-6400625 (Clockwise)

Preceding gene: 158317069

Following gene: 158317072

Centisome position: 71.24

GC content: 75.15

Gene sequence:

>1722_bases
GTGCGCATACTCGTCACCGGTGCGACCGGGTATATCGGTGGTCGGCTGGCACCCCGCCTGCTCGGCCAGGGCCATCATGT
CCGCTGCATGACCCGTGATCCGGCGCGGCTGTCCGACGTCGGCTGGGCCCGGCATCCCGACATCGAGGTGGTCCGTGCCG
ACGCCCTCGGCCCGGAGTCGCTGCGCGCGGCGATGGAGGATGTCGACGTCGCCTACTACCTGATCCACTCGATCGACACC
GGCGGCGACTTCTCGGCCGTGGACCGCCGGGCGGCCGCGGCGTTCGCGCGGGCGGCGCGGGCCGCCGGCGTCCGGCGGAT
CATCTACCTGGGTGGGCTGAGCCCGGCCACCGGCATCGGCATGTCGGCGCACCTGGCGTCCCGGCAGGAGGTCGCGCGGA
TCCTGCTCGACTCCGGGGTGCCCACGGTCGTGCTGCGCGCCGCGATCATCATCGGCAGCGGCAGCGCGTCGTTCGAGATG
CTGCGCCACCTCACCGAGCGGCTGCCGGTGATGCTCACCCCACGCTGGGTGCGGACCCGCATCCAGCCGATCGCCGTCCG
GGACGTCCTGCACTACCTCATCGGATGTCTCCAGCTGCCGGCCGAGATCAACCGCTCGTTCGACATCGGCGGGCCGGACG
TCCTGACCTACGCCGACATGATGCAGCGTTTCGCGGCGGTCGAGGGCCTGCGTCGCCGAGTGATCATCCGTGTGCCGGTG
CTCTCCCCCGGCCTGTCGTCGCTGTGGGTCGGGGTGGTGACGCCGGTCCCCCGGGCGATCGCGCGGCCGCTGGTCCGCTC
GCTGCGGACGGAGGTGGTCGTCGGCGAGCACGACATCGCGCGGTGGGTGCCGGACCCGCCCGAGGGGCTGCTGCCGTTCG
AGACCGCGGTCGCCTACGCGCTGGCGCGGGTGCGCGACCGGACAGTGGAGACCCGGTGGTCGACTGCGGTCTGGCCGGGC
AGCCCGCTCGCCGCGCCGTTCCCCGAGGTCGCCGCATACCTCTCCGCCGACCGGGCCGGCCGCCGCGGGCACCGCCCGGT
TGCGGCCGGTGTCCGGACCGCGGACGCCAGCCGGACGGCGGCGGACGGCGGCTCGCCGGACAACGCCCCGTCCAACGGAA
TCCTGCCCGGCGGCGCTCCGCCGGGCGAACCCGTCCCGACCGATCCGGCCTGGGCCGGGAGCTCGCTCTACAGCGACGAG
CGGTCGAAGGCGGTGGCCGCGCCCGCGGACCGTCTGTGGCAGGTCATCGAGGGGATCGGCGGCGAGAACGGCTGGTACAG
CTGGCCGCTGGCGTGGTCGGCGCGCGGGTGGCTCGACACGCTCGTCGGCGGGGTCGGGCACCGCCGCGGCCGGCGCGACC
CAGCCCACCTGCACACCGGGGAGGCGATCGACCTGTGGCGGGTCGAGGAGCTGGTCCCCGGACGGCTGTTGCGCCTGCGC
GCCGAGATGAGGCTGCCCGGCCACGCCTGGCTCGAGCTGCGCGTCGGGCCAGGCGGCCCCGACGGCAGGACGGTCTACCG
GCAGCGGGCGCTGTTCCTGCCGCGCGGGCTGCCGGGCCACCTCTACTGGCGGGCCGTCAGCCCGTTCCACGCCGTGGTCT
TCGGCGGAATGCTGCGCACCATCGTCCGCCGGGCCGAATCCGCCCCGGCCGCGGCCGCGCCGGCTGTGGCGGCCCCGACG
GAGTCGACTTCGATCGAGCCGACCACGCCGGCCGGCCGGTGA

Upstream 100 bases:

>100_bases
CTGAGCACGGTGGGGGACGTCTCCGAGGCCGCGAGCGCCTGACCCGTCCCACCCGGTCTGTGGGGCGGTACCCGCCGCCG
GGCCGGGGCAGGTACCCGGG

Downstream 100 bases:

>100_bases
CCGGCCACCGGCCGGCACACCGCCTCGTCCTTAGGTGTGGTCTCAGGTGTGGTCGGCCTCGTCGGGGATCTCCATCTCGA
ACCAGACCCGCTTGCCGTCC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MRILVTGATGYIGGRLAPRLLGQGHHVRCMTRDPARLSDVGWARHPDIEVVRADALGPESLRAAMEDVDVAYYLIHSIDT
GGDFSAVDRRAAAAFARAARAAGVRRIIYLGGLSPATGIGMSAHLASRQEVARILLDSGVPTVVLRAAIIIGSGSASFEM
LRHLTERLPVMLTPRWVRTRIQPIAVRDVLHYLIGCLQLPAEINRSFDIGGPDVLTYADMMQRFAAVEGLRRRVIIRVPV
LSPGLSSLWVGVVTPVPRAIARPLVRSLRTEVVVGEHDIARWVPDPPEGLLPFETAVAYALARVRDRTVETRWSTAVWPG
SPLAAPFPEVAAYLSADRAGRRGHRPVAAGVRTADASRTAADGGSPDNAPSNGILPGGAPPGEPVPTDPAWAGSSLYSDE
RSKAVAAPADRLWQVIEGIGGENGWYSWPLAWSARGWLDTLVGGVGHRRGRRDPAHLHTGEAIDLWRVEELVPGRLLRLR
AEMRLPGHAWLELRVGPGGPDGRTVYRQRALFLPRGLPGHLYWRAVSPFHAVVFGGMLRTIVRRAESAPAAAAPAVAAPT
ESTSIEPTTPAGR

Sequences:

>Translated_573_residues
MRILVTGATGYIGGRLAPRLLGQGHHVRCMTRDPARLSDVGWARHPDIEVVRADALGPESLRAAMEDVDVAYYLIHSIDT
GGDFSAVDRRAAAAFARAARAAGVRRIIYLGGLSPATGIGMSAHLASRQEVARILLDSGVPTVVLRAAIIIGSGSASFEM
LRHLTERLPVMLTPRWVRTRIQPIAVRDVLHYLIGCLQLPAEINRSFDIGGPDVLTYADMMQRFAAVEGLRRRVIIRVPV
LSPGLSSLWVGVVTPVPRAIARPLVRSLRTEVVVGEHDIARWVPDPPEGLLPFETAVAYALARVRDRTVETRWSTAVWPG
SPLAAPFPEVAAYLSADRAGRRGHRPVAAGVRTADASRTAADGGSPDNAPSNGILPGGAPPGEPVPTDPAWAGSSLYSDE
RSKAVAAPADRLWQVIEGIGGENGWYSWPLAWSARGWLDTLVGGVGHRRGRRDPAHLHTGEAIDLWRVEELVPGRLLRLR
AEMRLPGHAWLELRVGPGGPDGRTVYRQRALFLPRGLPGHLYWRAVSPFHAVVFGGMLRTIVRRAESAPAAAAPAVAAPT
ESTSIEPTTPAGR
>Mature_573_residues
MRILVTGATGYIGGRLAPRLLGQGHHVRCMTRDPARLSDVGWARHPDIEVVRADALGPESLRAAMEDVDVAYYLIHSIDT
GGDFSAVDRRAAAAFARAARAAGVRRIIYLGGLSPATGIGMSAHLASRQEVARILLDSGVPTVVLRAAIIIGSGSASFEM
LRHLTERLPVMLTPRWVRTRIQPIAVRDVLHYLIGCLQLPAEINRSFDIGGPDVLTYADMMQRFAAVEGLRRRVIIRVPV
LSPGLSSLWVGVVTPVPRAIARPLVRSLRTEVVVGEHDIARWVPDPPEGLLPFETAVAYALARVRDRTVETRWSTAVWPG
SPLAAPFPEVAAYLSADRAGRRGHRPVAAGVRTADASRTAADGGSPDNAPSNGILPGGAPPGEPVPTDPAWAGSSLYSDE
RSKAVAAPADRLWQVIEGIGGENGWYSWPLAWSARGWLDTLVGGVGHRRGRRDPAHLHTGEAIDLWRVEELVPGRLLRLR
AEMRLPGHAWLELRVGPGGPDGRTVYRQRALFLPRGLPGHLYWRAVSPFHAVVFGGMLRTIVRRAESAPAAAAPAVAAPT
ESTSIEPTTPAGR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=312, Percent_Identity=36.8589743589744, Blast_Score=198, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 61695; Mature: 61695

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVTGATGYIGGRLAPRLLGQGHHVRCMTRDPARLSDVGWARHPDIEVVRADALGPES
CEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCEEEEECCCCHHH
LRAAMEDVDVAYYLIHSIDTGGDFSAVDRRAAAAFARAARAAGVRRIIYLGGLSPATGIG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
MSAHLASRQEVARILLDSGVPTVVLRAAIIIGSGSASFEMLRHLTERLPVMLTPRWVRTR
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCCEEECCHHHHHH
IQPIAVRDVLHYLIGCLQLPAEINRSFDIGGPDVLTYADMMQRFAAVEGLRRRVIIRVPV
CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECC
LSPGLSSLWVGVVTPVPRAIARPLVRSLRTEVVVGEHDIARWVPDPPEGLLPFETAVAYA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCHHHHCCCCCCCCCCCHHHHHHHH
LARVRDRTVETRWSTAVWPGSPLAAPFPEVAAYLSADRAGRRGHRPVAAGVRTADASRTA
HHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC
ADGGSPDNAPSNGILPGGAPPGEPVPTDPAWAGSSLYSDERSKAVAAPADRLWQVIEGIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCHHHHHHHHHHCC
GENGWYSWPLAWSARGWLDTLVGGVGHRRGRRDPAHLHTGEAIDLWRVEELVPGRLLRLR
CCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHCCHHHHHHH
AEMRLPGHAWLELRVGPGGPDGRTVYRQRALFLPRGLPGHLYWRAVSPFHAVVFGGMLRT
HHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHH
IVRRAESAPAAAAPAVAAPTESTSIEPTTPAGR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRILVTGATGYIGGRLAPRLLGQGHHVRCMTRDPARLSDVGWARHPDIEVVRADALGPES
CEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCCEEEEECCCCHHH
LRAAMEDVDVAYYLIHSIDTGGDFSAVDRRAAAAFARAARAAGVRRIIYLGGLSPATGIG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
MSAHLASRQEVARILLDSGVPTVVLRAAIIIGSGSASFEMLRHLTERLPVMLTPRWVRTR
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCCEEECCHHHHHH
IQPIAVRDVLHYLIGCLQLPAEINRSFDIGGPDVLTYADMMQRFAAVEGLRRRVIIRVPV
CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECC
LSPGLSSLWVGVVTPVPRAIARPLVRSLRTEVVVGEHDIARWVPDPPEGLLPFETAVAYA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCHHHHCCCCCCCCCCCHHHHHHHH
LARVRDRTVETRWSTAVWPGSPLAAPFPEVAAYLSADRAGRRGHRPVAAGVRTADASRTA
HHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC
ADGGSPDNAPSNGILPGGAPPGEPVPTDPAWAGSSLYSDERSKAVAAPADRLWQVIEGIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCHHHHHHHHHHCC
GENGWYSWPLAWSARGWLDTLVGGVGHRRGRRDPAHLHTGEAIDLWRVEELVPGRLLRLR
CCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHCCHHHHHHH
AEMRLPGHAWLELRVGPGGPDGRTVYRQRALFLPRGLPGHLYWRAVSPFHAVVFGGMLRT
HHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHH
IVRRAESAPAAAAPAVAAPTESTSIEPTTPAGR
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]