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The map label for this gene is rpiB [H]

Identifier: 158317059

GI number: 158317059

Start: 6384640

End: 6385125

Strand: Reverse

Name: rpiB [H]

Synonym: Franean1_5303

Alternate gene names: 158317059

Gene position: 6385125-6384640 (Counterclockwise)

Preceding gene: 158317060

Following gene: 158317058

Centisome position: 71.09

GC content: 70.78

Gene sequence:

>486_bases
ATGCGCGTCCATCTGGGTTCTGATCACGCCGGGTTCCACCTGAAGAAGGCTCTCGTCGCGCGCCTCGCGGAGCTCGGCCA
CGCCCCCGTCGACCACGGGCCTGTCGAGTACGACCCCGACGACGACTACCCGCCGTTCGTCATGGCCGCCGCGGCCGCCG
CCGCGGCGGAACCCGACAGCCTGGGGATCGTGATCGGCGGCTCGGGGAACGGCGAGGTCATCGCCGCGAACAAGGTCGAC
GGGGTGCGTGCGGCCCTGGTCTGGAGCGAACAGACGGCGACCCTCGCCCGTCAGCACAACGACGCCAACGTGATCAGCGT
GGGCGCCCGCATGCACTCGCTGCCCGAGGCGGTGGAGCTGGTCGAGATCTTCCTCGCGACGCCGTTCAGCGGAGAGCAGC
GTCACCTCCGCCGACTGCGGATGATCTCCGCCTACGAGCGTTCCGGGGAGATCCCCGAGCCGTCCCCCTCCTCGCCGGCG
TCCTGA

Upstream 100 bases:

>100_bases
CTCAAGCGCAGCCGTGAGCAGGGTCCGATCTTCGACTGATCCGCGAGGGGTTGGTCACCCCCGCGCGGCGGTGCGCGGTG
ACCGGGCATGATGGCGCATC

Downstream 100 bases:

>100_bases
GCGCCGTTCGGCCCGCGCCGGGCCCCACCGGCCCGCCGCGGCCGTCCGGCGCGCCCTCGGCCCGCTGACGGGTCCGACGG
GTTCGCTGACGGGCCTGACG

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRVHLGSDHAGFHLKKALVARLAELGHAPVDHGPVEYDPDDDYPPFVMAAAAAAAAEPDSLGIVIGGSGNGEVIAANKVD
GVRAALVWSEQTATLARQHNDANVISVGARMHSLPEAVELVEIFLATPFSGEQRHLRRLRMISAYERSGEIPEPSPSSPA
S

Sequences:

>Translated_161_residues
MRVHLGSDHAGFHLKKALVARLAELGHAPVDHGPVEYDPDDDYPPFVMAAAAAAAAEPDSLGIVIGGSGNGEVIAANKVD
GVRAALVWSEQTATLARQHNDANVISVGARMHSLPEAVELVEIFLATPFSGEQRHLRRLRMISAYERSGEIPEPSPSSPA
S
>Mature_161_residues
MRVHLGSDHAGFHLKKALVARLAELGHAPVDHGPVEYDPDDDYPPFVMAAAAAAAAEPDSLGIVIGGSGNGEVIAANKVD
GVRAALVWSEQTATLARQHNDANVISVGARMHSLPEAVELVEIFLATPFSGEQRHLRRLRMISAYERSGEIPEPSPSSPA
S

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=146, Percent_Identity=38.3561643835616, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011860
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 17047; Mature: 17047

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVHLGSDHAGFHLKKALVARLAELGHAPVDHGPVEYDPDDDYPPFVMAAAAAAAAEPDS
CEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
LGIVIGGSGNGEVIAANKVDGVRAALVWSEQTATLARQHNDANVISVGARMHSLPEAVEL
EEEEEECCCCCCEEEECCCCCEEEEEEECCHHHHHHHHCCCCCEEEECHHHHCCHHHHHH
VEIFLATPFSGEQRHLRRLRMISAYERSGEIPEPSPSSPAS
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVHLGSDHAGFHLKKALVARLAELGHAPVDHGPVEYDPDDDYPPFVMAAAAAAAAEPDS
CEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
LGIVIGGSGNGEVIAANKVDGVRAALVWSEQTATLARQHNDANVISVGARMHSLPEAVEL
EEEEEECCCCCCEEEECCCCCEEEEEEECCHHHHHHHHCCCCCEEEECHHHHCCHHHHHH
VEIFLATPFSGEQRHLRRLRMISAYERSGEIPEPSPSSPAS
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]