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The map label for this gene is ybfF [C]

Identifier: 158317058

GI number: 158317058

Start: 6382350

End: 6383492

Strand: Reverse

Name: ybfF [C]

Synonym: Franean1_5302

Alternate gene names: 158317058

Gene position: 6383492-6382350 (Counterclockwise)

Preceding gene: 158317059

Following gene: 158317057

Centisome position: 71.07

GC content: 74.28

Gene sequence:

>1143_bases
ATGGACCTTGTGCCTGTGAGCGTGGTCATTCCCGCTTACAACGAGGCACTTCGTCTTCCGGCGTCCCTGCCGCGGCTGCT
GGCTGTCGTGGGCAAGATCCCCAGGGCTGAGGTGATCGTCGTCGACGACGGCAGCACCGATGGCACCGCCGGGGTCGCCG
AGGACCTGCTCGAGGGCTTTCCGAACCACCGTGTGGTACGCCTGCCGTGGAACTGCGGAAAGGGCACCGCGGTAAGGGCG
GGCGTGTCGGCCGCGCATGGCCGGTCGATCGTCTTCATGGACGCCGACGGGGCCTCCGACGTGAACGACCTGCCGTTGCT
GCTCGCCGCGCTCGAGCACGCCGAGGTGGCGCTGGGCTCGCGGCGAATCGGCGACGGAGCCACCCGGACAAGCGGCCGCA
GGGCCGGTAGCTGGGCTTTCAATCAGATTACGCGTTCACTCGCGGCGCTGGACGTCGCTGACACGCAGTGTGGCTTCAAG
GCGTTTCGGCACGCGGAAGCCAAGATTCTTTTCAGTCTCGCGCGCTCCACCGGCTTCGGATTCGACGTCGAGGTGCTCTC
GATCGCGCGCTCGGTTGGCTATCGCATCGCCGAGGTACCCGTGCGCTGGGAGGAGACGCCCGGCGGCACCTTCCGGATCA
CCCGGCACACCCCCGCGATGCTCGTCGACGTCGTCCGGGCCCGCCGCTATCTCAGCCGGGTCGGGCTCCCGCCGGTCAGC
CGTCGCCAGCGGCTGGGCGAGCTCGGTGTCGTGGACGCGTCCGAGCTGCTCGGCCGGCCGGCCACGCCGCGCGGTGCGGG
GGAACCGCAGGGTGCCCCGCCCGGCCAGCTGCCGGTGCCCGCGGCCCCCACCCGGCCCGGCACACCGGCCCGGCCGACGG
CCCGTACCCGGCCCGGCACACCGGCCCGGCCGGTGCCCGCCGCCCGGCCCACGACCGCCGCCGCTCCCGCCCGGCCCGCG
GCCGTTCCCGCACTGCCCATGACTCCCGCGCTGCCCGCCGCCCCCGCGCGGCCCCCCGCGGTGCCCCGCCCCACGCCGCG
TCCCGCTCCCGCGGTTCCAGCCGTGAGCGTGGCGCACGGGACCGGGCGGTTCACCCCGTCGCCCTCCCGCGGTGAGATCC
CCGGTCCCGCGCCCGCACCGTGA

Upstream 100 bases:

>100_bases
ACTCCCCCGAAACTCGGCGATTCAGACTGGTCGCCACGGACAGACTCCATCCGGTGAGGGTCCGGTCATCGCTCCTGTCG
TCACAGCCGAGGGGTGAGTA

Downstream 100 bases:

>100_bases
CCAGCGGAGCCTGCCCGGGCCCGGCCGCGCCCGCCGCGGGAACCGGCCGCCGCCCGGGCGTCACCGGCTCCCGCCGGCCG
CACCGGTCCCCAGCCCTGTC

Product: glycosyl transferase family protein

Products: UDP; dolichyl beta-D-glucosyl phosphate

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDLVPVSVVIPAYNEALRLPASLPRLLAVVGKIPRAEVIVVDDGSTDGTAGVAEDLLEGFPNHRVVRLPWNCGKGTAVRA
GVSAAHGRSIVFMDADGASDVNDLPLLLAALEHAEVALGSRRIGDGATRTSGRRAGSWAFNQITRSLAALDVADTQCGFK
AFRHAEAKILFSLARSTGFGFDVEVLSIARSVGYRIAEVPVRWEETPGGTFRITRHTPAMLVDVVRARRYLSRVGLPPVS
RRQRLGELGVVDASELLGRPATPRGAGEPQGAPPGQLPVPAAPTRPGTPARPTARTRPGTPARPVPAARPTTAAAPARPA
AVPALPMTPALPAAPARPPAVPRPTPRPAPAVPAVSVAHGTGRFTPSPSRGEIPGPAPAP

Sequences:

>Translated_380_residues
MDLVPVSVVIPAYNEALRLPASLPRLLAVVGKIPRAEVIVVDDGSTDGTAGVAEDLLEGFPNHRVVRLPWNCGKGTAVRA
GVSAAHGRSIVFMDADGASDVNDLPLLLAALEHAEVALGSRRIGDGATRTSGRRAGSWAFNQITRSLAALDVADTQCGFK
AFRHAEAKILFSLARSTGFGFDVEVLSIARSVGYRIAEVPVRWEETPGGTFRITRHTPAMLVDVVRARRYLSRVGLPPVS
RRQRLGELGVVDASELLGRPATPRGAGEPQGAPPGQLPVPAAPTRPGTPARPTARTRPGTPARPVPAARPTTAAAPARPA
AVPALPMTPALPAAPARPPAVPRPTPRPAPAVPAVSVAHGTGRFTPSPSRGEIPGPAPAP
>Mature_380_residues
MDLVPVSVVIPAYNEALRLPASLPRLLAVVGKIPRAEVIVVDDGSTDGTAGVAEDLLEGFPNHRVVRLPWNCGKGTAVRA
GVSAAHGRSIVFMDADGASDVNDLPLLLAALEHAEVALGSRRIGDGATRTSGRRAGSWAFNQITRSLAALDVADTQCGFK
AFRHAEAKILFSLARSTGFGFDVEVLSIARSVGYRIAEVPVRWEETPGGTFRITRHTPAMLVDVVRARRYLSRVGLPPVS
RRQRLGELGVVDASELLGRPATPRGAGEPQGAPPGQLPVPAAPTRPGTPARPTARTRPGTPARPVPAARPTTAAAPARPA
AVPALPMTPALPAAPARPPAVPRPTPRPAPAVPAVSVAHGTGRFTPSPSRGEIPGPAPAP

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7019323, Length=223, Percent_Identity=35.4260089686099, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI215276969, Length=214, Percent_Identity=31.7757009345794, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4503363, Length=206, Percent_Identity=29.6116504854369, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1788588, Length=176, Percent_Identity=28.4090909090909, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25146207, Length=224, Percent_Identity=32.5892857142857, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71999402, Length=236, Percent_Identity=28.8135593220339, Blast_Score=83, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6325029, Length=248, Percent_Identity=31.4516129032258, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24582769, Length=224, Percent_Identity=37.5, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24585265, Length=218, Percent_Identity=29.8165137614679, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.117

Molecular weight: Translated: 39476; Mature: 39476

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVPVSVVIPAYNEALRLPASLPRLLAVVGKIPRAEVIVVDDGSTDGTAGVAEDLLEGF
CCCCEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
PNHRVVRLPWNCGKGTAVRAGVSAAHGRSIVFMDADGASDVNDLPLLLAALEHAEVALGS
CCCEEEEECCCCCCCCEEECCCHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
RRIGDGATRTSGRRAGSWAFNQITRSLAALDVADTQCGFKAFRHAEAKILFSLARSTGFG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FDVEVLSIARSVGYRIAEVPVRWEETPGGTFRITRHTPAMLVDVVRARRYLSRVGLPPVS
CCHHHHHHHHHHCCEEEECCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHH
RRQRLGELGVVDASELLGRPATPRGAGEPQGAPPGQLPVPAAPTRPGTPARPTARTRPGT
HHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PARPVPAARPTTAAAPARPAAVPALPMTPALPAAPARPPAVPRPTPRPAPAVPAVSVAHG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
TGRFTPSPSRGEIPGPAPAP
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLVPVSVVIPAYNEALRLPASLPRLLAVVGKIPRAEVIVVDDGSTDGTAGVAEDLLEGF
CCCCEEEEEECCCHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
PNHRVVRLPWNCGKGTAVRAGVSAAHGRSIVFMDADGASDVNDLPLLLAALEHAEVALGS
CCCEEEEECCCCCCCCEEECCCHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
RRIGDGATRTSGRRAGSWAFNQITRSLAALDVADTQCGFKAFRHAEAKILFSLARSTGFG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FDVEVLSIARSVGYRIAEVPVRWEETPGGTFRITRHTPAMLVDVVRARRYLSRVGLPPVS
CCHHHHHHHHHHCCEEEECCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHH
RRQRLGELGVVDASELLGRPATPRGAGEPQGAPPGQLPVPAAPTRPGTPARPTARTRPGT
HHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PARPVPAARPTTAAAPARPAAVPALPMTPALPAAPARPPAVPRPTPRPAPAVPAVSVAHG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
TGRFTPSPSRGEIPGPAPAP
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-glucose; dolichyl phosphate

Specific reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]