| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317048
Identifier: 158317048
GI number: 158317048
Start: 6365944
End: 6366681
Strand: Reverse
Name: 158317048
Synonym: Franean1_5292
Alternate gene names: NA
Gene position: 6366681-6365944 (Counterclockwise)
Preceding gene: 158317049
Following gene: 158317047
Centisome position: 70.88
GC content: 69.38
Gene sequence:
>738_bases ATGAGTGACGAGTCCGGTTCCGCCCTTCGGGACACGCCTGGTTCCACCGAGCAGGACGATTCCGGCGCCACGCGACGTAT CCGCGCGGTGCGCTCCCGGTTCAGCCCCGTCCGCCTGATCGCCTACCTCGTGCTGGTGCTCCTCGTCATCTCCGGCCTCG CGTTCGTCGCCGGTTGGCGGCCGTCGATACCGAACCCGTTCGAGGAACGGACGATCGACCGCAGCTCGCCGGCCGTGCTC CGCTCGCTCGAGGATCTCAGCGAATACCACGCGGCGAGCGCGCACTTCGAGGTCGTCGTCGACCTGGAGGAGGACAGCCG CTGGATCCCGGACGCGCTGCGCGGGGAGCGCACGCTGTTCGTCGGGGTCGGCACCGTCGACTCGGTCATCGACTTCGGCA AGCTCGGGGACGGCGCGGTCACCGTCTCCGCGGACCGGCGGTCGGTGACCATCCAGCTGCCCGCTCCCACCATCTCCGAG CCGCGGCTCGATCTCGACAAGAGCTACGTGGTCGCCCGCCAGCGGGGCGTGCTGAACCGGGTGGGCGGGCTGTTCGGCGG CCAGAGCAATGACTCCGAGCTCTATCAGACGGCGTCCGCGAAGATGGCCGACGCCGCGAATGCCGACGGCCAGGTGCTCG CGCTCGCGAAGACGAACACCACGGCGATGCTGCGCGGCCTCCTCGGTGCGCTCGGCTTCACCGATGTGAAGGTGACCTAC GCGGAGGACCCCAAGTAA
Upstream 100 bases:
>100_bases TCCCGCCCGCGCCCCTGACCGGCCCTCGCGGCTGGGAAGCGACGCGCGGCACGATCGCGACAACGATTGATCGCAATCTT CGTCGGGTACATGTCCGACC
Downstream 100 bases:
>100_bases CGCCCCGGGCGCCGAACCCGTCCCGCCGGTGGTCTCCCGCCGGCGGGACGGAGCAGCGGCGGGCGGAGACGCGGCCCAGC GCGATCCGGGACGACCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSDESGSALRDTPGSTEQDDSGATRRIRAVRSRFSPVRLIAYLVLVLLVISGLAFVAGWRPSIPNPFEERTIDRSSPAVL RSLEDLSEYHAASAHFEVVVDLEEDSRWIPDALRGERTLFVGVGTVDSVIDFGKLGDGAVTVSADRRSVTIQLPAPTISE PRLDLDKSYVVARQRGVLNRVGGLFGGQSNDSELYQTASAKMADAANADGQVLALAKTNTTAMLRGLLGALGFTDVKVTY AEDPK
Sequences:
>Translated_245_residues MSDESGSALRDTPGSTEQDDSGATRRIRAVRSRFSPVRLIAYLVLVLLVISGLAFVAGWRPSIPNPFEERTIDRSSPAVL RSLEDLSEYHAASAHFEVVVDLEEDSRWIPDALRGERTLFVGVGTVDSVIDFGKLGDGAVTVSADRRSVTIQLPAPTISE PRLDLDKSYVVARQRGVLNRVGGLFGGQSNDSELYQTASAKMADAANADGQVLALAKTNTTAMLRGLLGALGFTDVKVTY AEDPK >Mature_244_residues SDESGSALRDTPGSTEQDDSGATRRIRAVRSRFSPVRLIAYLVLVLLVISGLAFVAGWRPSIPNPFEERTIDRSSPAVLR SLEDLSEYHAASAHFEVVVDLEEDSRWIPDALRGERTLFVGVGTVDSVIDFGKLGDGAVTVSADRRSVTIQLPAPTISEP RLDLDKSYVVARQRGVLNRVGGLFGGQSNDSELYQTASAKMADAANADGQVLALAKTNTTAMLRGLLGALGFTDVKVTYA EDPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26337; Mature: 26206
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDESGSALRDTPGSTEQDDSGATRRIRAVRSRFSPVRLIAYLVLVLLVISGLAFVAGWR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC PSIPNPFEERTIDRSSPAVLRSLEDLSEYHAASAHFEVVVDLEEDSRWIPDALRGERTLF CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCCEEEE VGVGTVDSVIDFGKLGDGAVTVSADRRSVTIQLPAPTISEPRLDLDKSYVVARQRGVLNR EECCCHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH VGGLFGGQSNDSELYQTASAKMADAANADGQVLALAKTNTTAMLRGLLGALGFTDVKVTY HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEE AEDPK CCCCC >Mature Secondary Structure SDESGSALRDTPGSTEQDDSGATRRIRAVRSRFSPVRLIAYLVLVLLVISGLAFVAGWR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC PSIPNPFEERTIDRSSPAVLRSLEDLSEYHAASAHFEVVVDLEEDSRWIPDALRGERTLF CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCCEEEE VGVGTVDSVIDFGKLGDGAVTVSADRRSVTIQLPAPTISEPRLDLDKSYVVARQRGVLNR EECCCHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH VGGLFGGQSNDSELYQTASAKMADAANADGQVLALAKTNTTAMLRGLLGALGFTDVKVTY HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEE AEDPK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA