Click here to switch to the map view.

The map label for this gene is 158317049

Identifier: 158317049

GI number: 158317049

Start: 6366764

End: 6368662

Strand: Reverse

Name: 158317049

Synonym: Franean1_5293

Alternate gene names: NA

Gene position: 6368662-6366764 (Counterclockwise)

Preceding gene: 158317050

Following gene: 158317048

Centisome position: 70.9

GC content: 73.93

Gene sequence:

>1899_bases
GTGGGTGAGACGGCGGGTCTGCGCAGCGGTATCCGCGTGCTCGTCACGATCTCCACGATCGCCGTAGCCGTGATGCTCGC
GCTCGCCGTGTTCGCCGCGTTGCGCGCGAACAACGCGGCTGCCGAGCGCGGCGAGCGGCTCGACCCGGCGGCGACGACCA
CCGCTCTCCTGCTCGCCGACTTCGTCGACCAGGAGAGCGCCGTCCGCGGCTATCTCATTACCGAGGAGCCGAGCTTCCTC
GGCCCGTACAACGAGTCCGATCGCACGATTCCCCAGCAGATGAACCGGCTACAGCAACTGCTGGCCGAGTTCCCCGACCT
CATCCAGGGCACCGCCGAGATCGAGGCCGCCTATCAGGCGTGGCGCAGTGATGTCGCCGAACCCGAGGTCGCCGCGATGG
AGGTCGGCGACGTCCAGATCGCGCGGAACATCGAAAAGGCCGGCGGCAGGGTGCGCTTCAACGAGCTGCGCGGCCGGGTG
GCGGATCTCGGGATAGCGATCGACAACGAGCAGACCGCGGCGTCCGGGCGGCTGGAGAGCGCCGCGGTCCTCCTCCTCAG
CTCACTGGCGAGCGCCGCGTTTGTGATTCTCGGCGTGGTACTCACGGTGTTGACCGTGCTGCGCAGGTGGCTGCTGCGCC
CCATCGACGCCCTGCGCCGGGCGGTGAACGCCGTCGCTGCCGGCCGGTACGACACCAGGATCCCCGAGGTCGGGCCGGAG
GAGATCGTCGAGCTCGCCGGCAACATCGAGGCGATGCGCGCGCAGCTCGTCCGGCTCGTGCGGCAGAACGAGCGGTCATG
GGAGGCCCTCGCCCAGCAGGGGCCGGCGGTGGTCGCGTTGCGTGACGCGCTCACACCTTCCGTGCTGCGGGCGCCTGGGC
TGGTGCTGCGGGGACGGGTCGACCCGGCGCAGGGCGAGCTCGCTGGCGACTGGTACGACTCCTTCGAGCTCCCGGACGGA
CGGGTCGGGATCGTGGTCGGTGACGTCTCCGGCCATGGCGCTGTGGCCGGTGTCTTCGCGTTGCGCCTCAAGCAGCTCCT
CGACGCCGCGCTGACCCGGGGCGCCGATCCCGGCCAGGCGATCGAGTGGGTCGTCGACAGCCTCGGGGAGACCGACGAGA
TGTTCGCGACCGCGGTGGTCGCGGTGGTCGACCCTGCCAGTGGGGAGGTCCGGCTCGCCAACGCGGGCCATCCGGACGCG
CTGCTGCTGCGCCGGGCGCGTCGCGCCGGGACCGCGGGCGACGTCGGAGAGGGCGCGCCCAGGGCGGGGGAGCCCGCCGG
TCCGCGGACGGTTGTCGCCGTCGCCGGCACGTTCGTCGCCGGTGCCGTCGTCGGCGAGACCATCGAGGGCGAGGCCGTCG
AGTGCGATGCCGCCGGGGAGGCGCGGGAGCCAGGACTGGCCTCGGCGGTGGCCCGCGCCGGGTCCGCCGGCGGAGGCGTC
GGTGACGGCGCTGGCAGCGGCAGCGGTGGCAGCGGCGCTGGCGCGGGCAGCGGTGGTGGTGGCGGGGCTGGGGGCCCGGG
ACTCCCGGAAGCGGGGCCGGGACGGCCACAGGCCGCCGGCCGCCGTGCGGAGGTGGCCTGCCTGGCCGCCACCGGGCCGA
TCATGTCGAGCCTGGTCGCCGCCGACGGCGCGTGGCACACCGACGTGCTGCGGCTGGAACCCGGCGACGTGCTGTTCGTG
TACACCGACGGGCTGGTGGAGGCCAGGAACGCGGCCCACCAGCAGTTCGGCGTCGATCGGCTCGTCGCCGAGCTGCTGCG
CGACCCGCGGCGGGCGCCGGCCGAGCTGTTGGATGACGCGTTCGAGGTCGTGCGGCGCCACGCCCCGGGCCGGCCGAGCG
ACGACCGCACCGCGATCGTCGTCGCCCGCACCACCGAGGTCTCCCGCCCGCGCCCCTGA

Upstream 100 bases:

>100_bases
CCTGGACGACAATGTCTCCTGAGGACAGTGCGTCGTGGCGGGACGGCCTCCCCGGGGACACCCCCGGGATCACCGCGGTC
GTGCGCCGGAGGAGTGACGG

Downstream 100 bases:

>100_bases
CCGGCCCTCGCGGCTGGGAAGCGACGCGCGGCACGATCGCGACAACGATTGATCGCAATCTTCGTCGGGTACATGTCCGA
CCATGAGTGACGAGTCCGGT

Product: stage II sporulation E family protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; Protein Serine/Threonine Phosphatase; Stage II Sporulation E Family Protein; Bacteriophytochrome; GAF Sensor Protein; Stage II Sporulation Protein E; Multi-Sensor Signal Transduction Histidine Kinase; Serine Phosphatase; Phosphoserine Phosphatase; Regulatory Protein; Two-Component Sensor Protein; Serine/Threonine Phosphatase Family Protein; LOW QUALITY PROTEIN Stage II Sporulation Protein E; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Stage II Sporulation E

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MGETAGLRSGIRVLVTISTIAVAVMLALAVFAALRANNAAAERGERLDPAATTTALLLADFVDQESAVRGYLITEEPSFL
GPYNESDRTIPQQMNRLQQLLAEFPDLIQGTAEIEAAYQAWRSDVAEPEVAAMEVGDVQIARNIEKAGGRVRFNELRGRV
ADLGIAIDNEQTAASGRLESAAVLLLSSLASAAFVILGVVLTVLTVLRRWLLRPIDALRRAVNAVAAGRYDTRIPEVGPE
EIVELAGNIEAMRAQLVRLVRQNERSWEALAQQGPAVVALRDALTPSVLRAPGLVLRGRVDPAQGELAGDWYDSFELPDG
RVGIVVGDVSGHGAVAGVFALRLKQLLDAALTRGADPGQAIEWVVDSLGETDEMFATAVVAVVDPASGEVRLANAGHPDA
LLLRRARRAGTAGDVGEGAPRAGEPAGPRTVVAVAGTFVAGAVVGETIEGEAVECDAAGEAREPGLASAVARAGSAGGGV
GDGAGSGSGGSGAGAGSGGGGGAGGPGLPEAGPGRPQAAGRRAEVACLAATGPIMSSLVAADGAWHTDVLRLEPGDVLFV
YTDGLVEARNAAHQQFGVDRLVAELLRDPRRAPAELLDDAFEVVRRHAPGRPSDDRTAIVVARTTEVSRPRP

Sequences:

>Translated_632_residues
MGETAGLRSGIRVLVTISTIAVAVMLALAVFAALRANNAAAERGERLDPAATTTALLLADFVDQESAVRGYLITEEPSFL
GPYNESDRTIPQQMNRLQQLLAEFPDLIQGTAEIEAAYQAWRSDVAEPEVAAMEVGDVQIARNIEKAGGRVRFNELRGRV
ADLGIAIDNEQTAASGRLESAAVLLLSSLASAAFVILGVVLTVLTVLRRWLLRPIDALRRAVNAVAAGRYDTRIPEVGPE
EIVELAGNIEAMRAQLVRLVRQNERSWEALAQQGPAVVALRDALTPSVLRAPGLVLRGRVDPAQGELAGDWYDSFELPDG
RVGIVVGDVSGHGAVAGVFALRLKQLLDAALTRGADPGQAIEWVVDSLGETDEMFATAVVAVVDPASGEVRLANAGHPDA
LLLRRARRAGTAGDVGEGAPRAGEPAGPRTVVAVAGTFVAGAVVGETIEGEAVECDAAGEAREPGLASAVARAGSAGGGV
GDGAGSGSGGSGAGAGSGGGGGAGGPGLPEAGPGRPQAAGRRAEVACLAATGPIMSSLVAADGAWHTDVLRLEPGDVLFV
YTDGLVEARNAAHQQFGVDRLVAELLRDPRRAPAELLDDAFEVVRRHAPGRPSDDRTAIVVARTTEVSRPRP
>Mature_631_residues
GETAGLRSGIRVLVTISTIAVAVMLALAVFAALRANNAAAERGERLDPAATTTALLLADFVDQESAVRGYLITEEPSFLG
PYNESDRTIPQQMNRLQQLLAEFPDLIQGTAEIEAAYQAWRSDVAEPEVAAMEVGDVQIARNIEKAGGRVRFNELRGRVA
DLGIAIDNEQTAASGRLESAAVLLLSSLASAAFVILGVVLTVLTVLRRWLLRPIDALRRAVNAVAAGRYDTRIPEVGPEE
IVELAGNIEAMRAQLVRLVRQNERSWEALAQQGPAVVALRDALTPSVLRAPGLVLRGRVDPAQGELAGDWYDSFELPDGR
VGIVVGDVSGHGAVAGVFALRLKQLLDAALTRGADPGQAIEWVVDSLGETDEMFATAVVAVVDPASGEVRLANAGHPDAL
LLRRARRAGTAGDVGEGAPRAGEPAGPRTVVAVAGTFVAGAVVGETIEGEAVECDAAGEAREPGLASAVARAGSAGGGVG
DGAGSGSGGSGAGAGSGGGGGAGGPGLPEAGPGRPQAAGRRAEVACLAATGPIMSSLVAADGAWHTDVLRLEPGDVLFVY
TDGLVEARNAAHQQFGVDRLVAELLRDPRRAPAELLDDAFEVVRRHAPGRPSDDRTAIVVARTTEVSRPRP

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65329; Mature: 65198

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGETAGLRSGIRVLVTISTIAVAVMLALAVFAALRANNAAAERGERLDPAATTTALLLAD
CCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH
FVDQESAVRGYLITEEPSFLGPYNESDRTIPQQMNRLQQLLAEFPDLIQGTAEIEAAYQA
HHCCHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
WRSDVAEPEVAAMEVGDVQIARNIEKAGGRVRFNELRGRVADLGIAIDNEQTAASGRLES
HHHHCCCCCHHHHCCCCHHHHHHHHHCCCEEEHHHHHCHHHHHEEEECCCCHHHCCCHHH
AAVLLLSSLASAAFVILGVVLTVLTVLRRWLLRPIDALRRAVNAVAAGRYDTRIPEVGPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EIVELAGNIEAMRAQLVRLVRQNERSWEALAQQGPAVVALRDALTPSVLRAPGLVLRGRV
HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEHHHCCHHHHHCCCEEEECCC
DPAQGELAGDWYDSFELPDGRVGIVVGDVSGHGAVAGVFALRLKQLLDAALTRGADPGQA
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
IEWVVDSLGETDEMFATAVVAVVDPASGEVRLANAGHPDALLLRRARRAGTAGDVGEGAP
HHHHHHHCCCHHHHHHHHHHHEECCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
RAGEPAGPRTVVAVAGTFVAGAVVGETIEGEAVECDAAGEAREPGLASAVARAGSAGGGV
CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCC
GDGAGSGSGGSGAGAGSGGGGGAGGPGLPEAGPGRPQAAGRRAEVACLAATGPIMSSLVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
ADGAWHTDVLRLEPGDVLFVYTDGLVEARNAAHQQFGVDRLVAELLRDPRRAPAELLDDA
CCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH
FEVVRRHAPGRPSDDRTAIVVARTTEVSRPRP
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
GETAGLRSGIRVLVTISTIAVAVMLALAVFAALRANNAAAERGERLDPAATTTALLLAD
CCCHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH
FVDQESAVRGYLITEEPSFLGPYNESDRTIPQQMNRLQQLLAEFPDLIQGTAEIEAAYQA
HHCCHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
WRSDVAEPEVAAMEVGDVQIARNIEKAGGRVRFNELRGRVADLGIAIDNEQTAASGRLES
HHHHCCCCCHHHHCCCCHHHHHHHHHCCCEEEHHHHHCHHHHHEEEECCCCHHHCCCHHH
AAVLLLSSLASAAFVILGVVLTVLTVLRRWLLRPIDALRRAVNAVAAGRYDTRIPEVGPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
EIVELAGNIEAMRAQLVRLVRQNERSWEALAQQGPAVVALRDALTPSVLRAPGLVLRGRV
HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEHHHCCHHHHHCCCEEEECCC
DPAQGELAGDWYDSFELPDGRVGIVVGDVSGHGAVAGVFALRLKQLLDAALTRGADPGQA
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
IEWVVDSLGETDEMFATAVVAVVDPASGEVRLANAGHPDALLLRRARRAGTAGDVGEGAP
HHHHHHHCCCHHHHHHHHHHHEECCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
RAGEPAGPRTVVAVAGTFVAGAVVGETIEGEAVECDAAGEAREPGLASAVARAGSAGGGV
CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCC
GDGAGSGSGGSGAGAGSGGGGGAGGPGLPEAGPGRPQAAGRRAEVACLAATGPIMSSLVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
ADGAWHTDVLRLEPGDVLFVYTDGLVEARNAAHQQFGVDRLVAELLRDPRRAPAELLDDA
CCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH
FEVVRRHAPGRPSDDRTAIVVARTTEVSRPRP
HHHHHHCCCCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA