| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317045
Identifier: 158317045
GI number: 158317045
Start: 6363355
End: 6363780
Strand: Reverse
Name: 158317045
Synonym: Franean1_5289
Alternate gene names: NA
Gene position: 6363780-6363355 (Counterclockwise)
Preceding gene: 158317047
Following gene: 158317044
Centisome position: 70.85
GC content: 73.71
Gene sequence:
>426_bases ATGTCCGCTCCTGGCAGGAGCGTGCGGCCTGGTCGGCCGGGATTCGCCGCGGCGTTGTTCGTCGCGGCGGGCGCCGCCGG CCTCGCCGGCTGTGACCAGGTCTCCGAGGAGACCCGTGCGGCCGGCGCGACCGTGGTCTGCTCACAGATCAACATTCAGC CGAGCGAGATCGAACAGAATCCGGAGTCGGCGCGCCTGGTCGCCCTCCTCGTACGCGACCTGGCGCCCGAGGACGACATC CGGGCCATCGCCGACCGCGTCGCGGACGATCCGACGGTGCTCAGCCCTCGCGCCCAGCTCGCGGACTGGGTGGACCAGCG CTGCGGGAACGCCGTCGGCGGCTCTGGCGGTCCGGGTGGTTCCGGTGGCTCGGGCGGCGGCGGGGCAGGCGGCGGGGACT CGGACGGCGAAGACTCCGAGGAGTGA
Upstream 100 bases:
>100_bases ATGTTCCAGGTCGCGATCCGCACACCATGAGACGGTAGTCCTCACCTCCGACAGATCTCCGCACCGACCGGTCCGTGCCA TCCTCGGAGACATGACACCG
Downstream 100 bases:
>100_bases CCGCGCGCCCGTACGTGCTTCTGAGCTGCGCGATGTCACTGGACGGGCGGATCGACGACTGCTCGCCCCAGCGGCTGGTC CTCTCCAGCCAGGCCGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSAPGRSVRPGRPGFAAALFVAAGAAGLAGCDQVSEETRAAGATVVCSQINIQPSEIEQNPESARLVALLVRDLAPEDDI RAIADRVADDPTVLSPRAQLADWVDQRCGNAVGGSGGPGGSGGSGGGGAGGGDSDGEDSEE
Sequences:
>Translated_141_residues MSAPGRSVRPGRPGFAAALFVAAGAAGLAGCDQVSEETRAAGATVVCSQINIQPSEIEQNPESARLVALLVRDLAPEDDI RAIADRVADDPTVLSPRAQLADWVDQRCGNAVGGSGGPGGSGGSGGGGAGGGDSDGEDSEE >Mature_140_residues SAPGRSVRPGRPGFAAALFVAAGAAGLAGCDQVSEETRAAGATVVCSQINIQPSEIEQNPESARLVALLVRDLAPEDDIR AIADRVADDPTVLSPRAQLADWVDQRCGNAVGGSGGPGGSGGSGGGGAGGGDSDGEDSEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13872; Mature: 13741
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPGRSVRPGRPGFAAALFVAAGAAGLAGCDQVSEETRAAGATVVCSQINIQPSEIEQN CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEHHCCCCCHHHHHCC PESARLVALLVRDLAPEDDIRAIADRVADDPTVLSPRAQLADWVDQRCGNAVGGSGGPGG CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SGGSGGGGAGGGDSDGEDSEE CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAPGRSVRPGRPGFAAALFVAAGAAGLAGCDQVSEETRAAGATVVCSQINIQPSEIEQN CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEHHCCCCCHHHHHCC PESARLVALLVRDLAPEDDIRAIADRVADDPTVLSPRAQLADWVDQRCGNAVGGSGGPGG CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SGGSGGGGAGGGDSDGEDSEE CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA