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The map label for this gene is 158317044

Identifier: 158317044

GI number: 158317044

Start: 6362600

End: 6363358

Strand: Reverse

Name: 158317044

Synonym: Franean1_5288

Alternate gene names: NA

Gene position: 6363358-6362600 (Counterclockwise)

Preceding gene: 158317045

Following gene: 158317043

Centisome position: 70.85

GC content: 74.57

Gene sequence:

>759_bases
GTGACCGCGCGCCCGTACGTGCTTCTGAGCTGCGCGATGTCACTGGACGGGCGGATCGACGACTGCTCGCCCCAGCGGCT
GGTCCTCTCCAGCCAGGCCGATCTCGACCGCGTGGACGAGGTCCGGGCCGGTTGCGACGCGATCCTGGTCGGTGCCCGCA
CGCTGCGCCGCGACAATCCCGGCCTCGCGGTCCGCTCGGAGCGCCGTCGAGCCGAGCGGACGGCGGCCGGCCGGCCGGCG
ACTCCGCTGCGCGCCGTCCTGACCAGCGGCGGACGGCTCGACCCGGACGCCCGCTTCTTCCTGGACGGCGCGGAGAAGGT
CGTCTACCGGTTCGCCGGAGCCGCGCCCCGGCCTGCGCCTGAATCTGGGCCTGGCGCTGGCGCTGGAGCGGGGGCGGGGG
CGGGTACCGGGACCGGGTCGCCGGCGCCGGCCGTCCCCCCGGATCTTTCCGCGGTGGCGACCGTCGTCGATCTCGAGGCG
CCGCCGCTGGAGCACCTGCTGGACGACCTGAGCCGGCGCGGCACGCGGCGCCTACTGGTCGAGGGCGGCACCACCGTGCA
CACCGCGTTCCTCACCGCGGGCCTGGTGGACGAGCTGCACCTGGTCATCGCGCCGTTCTTCGTCGGTGAGGCCGCCGCCC
CGACGTTCGTCGGCCCGGGTTCGTTCCCGTTCGACACCGCGCACCGACTGCGGCTCGTGGACGTCCGCCAGCTCGACGAC
GTCGTGCTGCTGCGTTACCTGACACCGTCCGTGACCTGA

Upstream 100 bases:

>100_bases
GCGGGAACGCCGTCGGCGGCTCTGGCGGTCCGGGTGGTTCCGGTGGCTCGGGCGGCGGCGGGGCAGGCGGCGGGGACTCG
GACGGCGAAGACTCCGAGGA

Downstream 100 bases:

>100_bases
TGTCGTCCGGCTGACGCCTGTCCGTTTTGTGAGCCTCCTGTCGGGCAGGCGGCCTAAGGGCGTTCCGCCCGAACTGTTTG
TCGAGGAGGACCCGTGTCCG

Product: deaminase-reductase domain-containing protein

Products: NA

Alternate protein names: HTP reductase [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTARPYVLLSCAMSLDGRIDDCSPQRLVLSSQADLDRVDEVRAGCDAILVGARTLRRDNPGLAVRSERRRAERTAAGRPA
TPLRAVLTSGGRLDPDARFFLDGAEKVVYRFAGAAPRPAPESGPGAGAGAGAGAGTGTGSPAPAVPPDLSAVATVVDLEA
PPLEHLLDDLSRRGTRRLLVEGGTTVHTAFLTAGLVDELHLVIAPFFVGEAAAPTFVGPGSFPFDTAHRLRLVDVRQLDD
VVLLRYLTPSVT

Sequences:

>Translated_252_residues
MTARPYVLLSCAMSLDGRIDDCSPQRLVLSSQADLDRVDEVRAGCDAILVGARTLRRDNPGLAVRSERRRAERTAAGRPA
TPLRAVLTSGGRLDPDARFFLDGAEKVVYRFAGAAPRPAPESGPGAGAGAGAGAGTGTGSPAPAVPPDLSAVATVVDLEA
PPLEHLLDDLSRRGTRRLLVEGGTTVHTAFLTAGLVDELHLVIAPFFVGEAAAPTFVGPGSFPFDTAHRLRLVDVRQLDD
VVLLRYLTPSVT
>Mature_251_residues
TARPYVLLSCAMSLDGRIDDCSPQRLVLSSQADLDRVDEVRAGCDAILVGARTLRRDNPGLAVRSERRRAERTAAGRPAT
PLRAVLTSGGRLDPDARFFLDGAEKVVYRFAGAAPRPAPESGPGAGAGAGAGAGTGTGSPAPAVPPDLSAVATVVDLEAP
PLEHLLDDLSRRGTRRLLVEGGTTVHTAFLTAGLVDELHLVIAPFFVGEAAAPTFVGPGSFPFDTAHRLRLVDVRQLDDV
VLLRYLTPSVT

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HTP reductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006401
- InterPro:   IPR011549
- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: =1.1.1.193 [H]

Molecular weight: Translated: 26420; Mature: 26289

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARPYVLLSCAMSLDGRIDDCSPQRLVLSSQADLDRVDEVRAGCDAILVGARTLRRDNP
CCCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEHHHHHHHCCCC
GLAVRSERRRAERTAAGRPATPLRAVLTSGGRLDPDARFFLDGAEKVVYRFAGAAPRPAP
CCEECHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCC
ESGPGAGAGAGAGAGTGTGSPAPAVPPDLSAVATVVDLEAPPLEHLLDDLSRRGTRRLLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEE
EGGTTVHTAFLTAGLVDELHLVIAPFFVGEAAAPTFVGPGSFPFDTAHRLRLVDVRQLDD
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHEEEEHHHHHHH
VVLLRYLTPSVT
HHHHHHHCCCCC
>Mature Secondary Structure 
TARPYVLLSCAMSLDGRIDDCSPQRLVLSSQADLDRVDEVRAGCDAILVGARTLRRDNP
CCCCEEEEEEHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEHHHHHHHCCCC
GLAVRSERRRAERTAAGRPATPLRAVLTSGGRLDPDARFFLDGAEKVVYRFAGAAPRPAP
CCEECHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCC
ESGPGAGAGAGAGAGTGTGSPAPAVPPDLSAVATVVDLEAPPLEHLLDDLSRRGTRRLLV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEE
EGGTTVHTAFLTAGLVDELHLVIAPFFVGEAAAPTFVGPGSFPFDTAHRLRLVDVRQLDD
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHEEEEHHHHHHH
VVLLRYLTPSVT
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]