The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317037

Identifier: 158317037

GI number: 158317037

Start: 6353744

End: 6354151

Strand: Direct

Name: 158317037

Synonym: Franean1_5281

Alternate gene names: NA

Gene position: 6353744-6354151 (Clockwise)

Preceding gene: 158317034

Following gene: 158317040

Centisome position: 70.74

GC content: 73.04

Gene sequence:

>408_bases
ATGTCGACCTTCAGGATCAGCGAGGTCGCCGGACTGCTCGGCGTCAGCGACGACACCGTGCGTCGCTGGGCCGACGGCGG
CCGGCTGCCGACGGTGCGTGACGGAGCGGGCCGGCAGGCCGTCGAGGGAGCCGTGCTCGCGCAGTTCGCGATCGACATCG
CCGGCGAGCTGCCGCTGACCCCACCGGCGATCGTCGGCGCCTCGGCGCGCAACCGCTTTCCCGGCATCGTGACGCGGGTG
CGCCGCGACGACGTGATGGCCCAGGTGGAGATCCAGTCGGGGCGGCACCGCGTGGTCTCGCTGATGAGCCGCGAGGCCGC
GGACGAGCTGGGCCTGGAGCCCGGCGTGCTCGCCGTGGGCACCGTGAAGGCGACGAACGTGGTGATCGAGCTTCCCGAGC
GGCACTGA

Upstream 100 bases:

>100_bases
TGAGACGGAACACCACGGGGCCACGCCGCGCTCCCCCGACGGGGATCGGGTCGCGACCGGCCGCGACGCCACCGACAGCG
GGGCCGGATATGGTGCCGGC

Downstream 100 bases:

>100_bases
CGGCCTGCACAGGCTCACCTGCACGGGGCTCAGCTGCCTCGGCGGCGCCTTTCGCGCGGCGCTGGCGGTCGCGCTCCAGT
CGCTCAGCCGACCCCGGCGC

Product: DNA binding domain-containing protein

Products: NA

Alternate protein names: TOBE Domain Protein; Regulator; Transcriptional Regulator MerR Family Protein; Merr Family Transcriptional Regulator

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSTFRISEVAGLLGVSDDTVRRWADGGRLPTVRDGAGRQAVEGAVLAQFAIDIAGELPLTPPAIVGASARNRFPGIVTRV
RRDDVMAQVEIQSGRHRVVSLMSREAADELGLEPGVLAVGTVKATNVVIELPERH

Sequences:

>Translated_135_residues
MSTFRISEVAGLLGVSDDTVRRWADGGRLPTVRDGAGRQAVEGAVLAQFAIDIAGELPLTPPAIVGASARNRFPGIVTRV
RRDDVMAQVEIQSGRHRVVSLMSREAADELGLEPGVLAVGTVKATNVVIELPERH
>Mature_134_residues
STFRISEVAGLLGVSDDTVRRWADGGRLPTVRDGAGRQAVEGAVLAQFAIDIAGELPLTPPAIVGASARNRFPGIVTRVR
RDDVMAQVEIQSGRHRVVSLMSREAADELGLEPGVLAVGTVKATNVVIELPERH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14363; Mature: 14231

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFRISEVAGLLGVSDDTVRRWADGGRLPTVRDGAGRQAVEGAVLAQFAIDIAGELPLT
CCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PPAIVGASARNRFPGIVTRVRRDDVMAQVEIQSGRHRVVSLMSREAADELGLEPGVLAVG
CCHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE
TVKATNVVIELPERH
EEEECEEEEECCCCC
>Mature Secondary Structure 
STFRISEVAGLLGVSDDTVRRWADGGRLPTVRDGAGRQAVEGAVLAQFAIDIAGELPLT
CCCCHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PPAIVGASARNRFPGIVTRVRRDDVMAQVEIQSGRHRVVSLMSREAADELGLEPGVLAVG
CCHHCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE
TVKATNVVIELPERH
EEEECEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA