Click here to switch to the map view.

The map label for this gene is ynhG [C]

Identifier: 158317034

GI number: 158317034

Start: 6351466

End: 6351864

Strand: Direct

Name: ynhG [C]

Synonym: Franean1_5278

Alternate gene names: 158317034

Gene position: 6351466-6351864 (Clockwise)

Preceding gene: 158317033

Following gene: 158317037

Centisome position: 70.71

GC content: 68.67

Gene sequence:

>399_bases
GTGGACACGACGATCTCGACCACGCCGTTCGAGCTGCTCGTCGACCGCTCGGAGCACCAGCTGACGATCTTTCGCGACAA
CACGGTGGTCGCGAAGCTGCCGGTCGGGATCGGTACCGAGGCGATCCCCACCCCGACCGGCACGTTCTACCTGACCGAGC
TGTTGCGCCCGGGCGACCCGAACGGCCCTTGGGGGCCGTTCGCCTTCGGCCTGTCCGGGTTCTCCGACGTGATCACCCAG
TTCAACGGCGCCGAGGGCATCGTCGGCCTGCACGGCACCAACCGCCCGGACCTGGTCGGCTCGGACGTGAGTATGGGATG
CGTCCGGCTGCGCAACGCCGACCTGCTCCGGTTGGTGGACGTCGTCCCGCTCGGCACCCCGATCACGATCGTCGGGTGA

Upstream 100 bases:

>100_bases
CACACCCCCCCTTTCATTACCCTGAGTGACGACAGTGGCCGCAGGGTAGCGAGGTGGCTGCCAGGGAGACAGACGATCTC
CGCTCGCCGGCTGGAGCTGG

Downstream 100 bases:

>100_bases
GCCGACGGGCGCGGGCCCTCGCCGAGCCCTCGTCCGAGGGCGGCCGATCAGGGTTCGGGGCGGCTGTTCAGGATTCGGCG
ATGGCGAACACGCGGCGGTA

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDTTISTTPFELLVDRSEHQLTIFRDNTVVAKLPVGIGTEAIPTPTGTFYLTELLRPGDPNGPWGPFAFGLSGFSDVITQ
FNGAEGIVGLHGTNRPDLVGSDVSMGCVRLRNADLLRLVDVVPLGTPITIVG

Sequences:

>Translated_132_residues
MDTTISTTPFELLVDRSEHQLTIFRDNTVVAKLPVGIGTEAIPTPTGTFYLTELLRPGDPNGPWGPFAFGLSGFSDVITQ
FNGAEGIVGLHGTNRPDLVGSDVSMGCVRLRNADLLRLVDVVPLGTPITIVG
>Mature_132_residues
MDTTISTTPFELLVDRSEHQLTIFRDNTVVAKLPVGIGTEAIPTPTGTFYLTELLRPGDPNGPWGPFAFGLSGFSDVITQ
FNGAEGIVGLHGTNRPDLVGSDVSMGCVRLRNADLLRLVDVVPLGTPITIVG

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 14034; Mature: 14034

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTISTTPFELLVDRSEHQLTIFRDNTVVAKLPVGIGTEAIPTPTGTFYLTELLRPGDP
CCCCCCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHEEEHHCCCCC
NGPWGPFAFGLSGFSDVITQFNGAEGIVGLHGTNRPDLVGSDVSMGCVRLRNADLLRLVD
CCCCCCHHHCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEH
VVPLGTPITIVG
HCCCCCCEEEEC
>Mature Secondary Structure
MDTTISTTPFELLVDRSEHQLTIFRDNTVVAKLPVGIGTEAIPTPTGTFYLTELLRPGDP
CCCCCCCCCEEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHEEEHHCCCCC
NGPWGPFAFGLSGFSDVITQFNGAEGIVGLHGTNRPDLVGSDVSMGCVRLRNADLLRLVD
CCCCCCHHHCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEH
VVPLGTPITIVG
HCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA