| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317035
Identifier: 158317035
GI number: 158317035
Start: 6351932
End: 6353083
Strand: Reverse
Name: 158317035
Synonym: Franean1_5279
Alternate gene names: NA
Gene position: 6353083-6351932 (Counterclockwise)
Preceding gene: 158317036
Following gene: 158317032
Centisome position: 70.73
GC content: 77.26
Gene sequence:
>1152_bases GTGGTCGACCAACTGCTCGTATCCCTCGTCCTGGCGCCCGCGGCGGGTGTGGTGACGAGCCGCATCCTGGTCGATCGGCT GCCCCCGCGGGTTGCGGTGCTCGGGTTCACCGCCGCCGCGGTCCTGTTCGCGCTGGCCAGCGCCGCGAGCCTGCTCGCGT TCGGGATGCCCGCGGCGGCGGGCCTGATCGGGTTCGCCCCCGACCTGCGCGCGGTGGCGCGCTCCTGGCAGATCGCCGTG GCACCGCTGTGGGCGTCGTGGATGTGCCTGGCGCTCGGCGCGGCCGTGATCATCTCGGTGGCGGTGACCGGGCGGCGCCA GTACGACTCCCTGCGCGCGGCCCGCACGGAGGCGGCGGCGCTGCCGGGCACCGGCGAGGTGGTGGTGATCCCCGACGGCC GTCCGGACGCCTTCGCGCTTCCCGGCGCGCCGGGGCGGATCGTCGTCACGGAGGGAATGCTCACGGCGCTCGGTGACGGC CGCCACCAGGCGCTCCTCGCTCACGAGCGGGCGCACCTGGCCGGCCGGCACCACCGCTTCGCGTTCACCGCGCGCCTCGC GGCCGCTGCCCTCCCAGCGTTGCGCCCCATGGTCACCCTGATCGACTACGCGATCGAGCGCTGGGCGGACGAGCAGGCGG CACAGGAGGTCGGCGACCGCCGGTCGGTCGCCCACGTCGTCGGAACAGCCGCGCTCGCCGCGACGGAACAGGCCGACCGG CATTCGGCGGCCGCCGGGACGGGAAGCTCACGGATCGGGCGGCGGGTCCCGTCCACGCTCCAGCGGATCGTGCGCGGCCC CGGGCGGGCGGGCGAACCCTGCCACGACCTCGTCCGCGGCGAGCACGCCCGGCACGCTCAGTCCGCCCCGCCAGCCCGGC ACTCCAAGCACAGGGGCCTCGCCCGCAGTCGGCGCCAGCGTGCCGAGGCCGTCCCGCCGGCGATGCTGCGGGCCGGCGCG CCCGGCCGCGGTCCCCAGCCCGGGCCGGTGCCACGCCGGATCGCGGCCCTGCTCGACGCGCCGCTGCGGGGCAACCGCGG GCTGCTGCTGGTGGCCCTGCCGGCGGCCCTCGCCGCCGCGTCGTGCGGTGTCGCCGTCGAGGCGTTGCTCGACCTGCCCT ACCGCCGCGTGTTCGCCATCGCCGAATCCTGA
Upstream 100 bases:
>100_bases ACGAGGCGCTCGTCCGCGATCTTCTCGCCTCCGCGCCGGCCCCCGCCGAGCACGGTGAGCACGGGCGCGGCTCCGAGTCG CGCCGGCAGGGCTGAGCCCG
Downstream 100 bases:
>100_bases ACAGCCGCCCCGAACCCTGATCGGCCGCCCTCGGACGAGGGCTCGGCGAGGGCCCGCGCCCGTCGGCTCACCCGACGATC GTGATCGGGGTGCCGAGCGG
Product: peptidase M48 Ste24p
Products: NA
Alternate protein names: Peptidase; M48 Family Peptidase; Peptidase M
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MVDQLLVSLVLAPAAGVVTSRILVDRLPPRVAVLGFTAAAVLFALASAASLLAFGMPAAAGLIGFAPDLRAVARSWQIAV APLWASWMCLALGAAVIISVAVTGRRQYDSLRAARTEAAALPGTGEVVVIPDGRPDAFALPGAPGRIVVTEGMLTALGDG RHQALLAHERAHLAGRHHRFAFTARLAAAALPALRPMVTLIDYAIERWADEQAAQEVGDRRSVAHVVGTAALAATEQADR HSAAAGTGSSRIGRRVPSTLQRIVRGPGRAGEPCHDLVRGEHARHAQSAPPARHSKHRGLARSRRQRAEAVPPAMLRAGA PGRGPQPGPVPRRIAALLDAPLRGNRGLLLVALPAALAAASCGVAVEALLDLPYRRVFAIAES
Sequences:
>Translated_383_residues MVDQLLVSLVLAPAAGVVTSRILVDRLPPRVAVLGFTAAAVLFALASAASLLAFGMPAAAGLIGFAPDLRAVARSWQIAV APLWASWMCLALGAAVIISVAVTGRRQYDSLRAARTEAAALPGTGEVVVIPDGRPDAFALPGAPGRIVVTEGMLTALGDG RHQALLAHERAHLAGRHHRFAFTARLAAAALPALRPMVTLIDYAIERWADEQAAQEVGDRRSVAHVVGTAALAATEQADR HSAAAGTGSSRIGRRVPSTLQRIVRGPGRAGEPCHDLVRGEHARHAQSAPPARHSKHRGLARSRRQRAEAVPPAMLRAGA PGRGPQPGPVPRRIAALLDAPLRGNRGLLLVALPAALAAASCGVAVEALLDLPYRRVFAIAES >Mature_383_residues MVDQLLVSLVLAPAAGVVTSRILVDRLPPRVAVLGFTAAAVLFALASAASLLAFGMPAAAGLIGFAPDLRAVARSWQIAV APLWASWMCLALGAAVIISVAVTGRRQYDSLRAARTEAAALPGTGEVVVIPDGRPDAFALPGAPGRIVVTEGMLTALGDG RHQALLAHERAHLAGRHHRFAFTARLAAAALPALRPMVTLIDYAIERWADEQAAQEVGDRRSVAHVVGTAALAATEQADR HSAAAGTGSSRIGRRVPSTLQRIVRGPGRAGEPCHDLVRGEHARHAQSAPPARHSKHRGLARSRRQRAEAVPPAMLRAGA PGRGPQPGPVPRRIAALLDAPLRGNRGLLLVALPAALAAASCGVAVEALLDLPYRRVFAIAES
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39864; Mature: 39864
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDQLLVSLVLAPAAGVVTSRILVDRLPPRVAVLGFTAAAVLFALASAASLLAFGMPAAA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GLIGFAPDLRAVARSWQIAVAPLWASWMCLALGAAVIISVAVTGRRQYDSLRAARTEAAA HHHHCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC LPGTGEVVVIPDGRPDAFALPGAPGRIVVTEGMLTALGDGRHQALLAHERAHLAGRHHRF CCCCCCEEEEECCCCCCEECCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCCHHH AFTARLAAAALPALRPMVTLIDYAIERWADEQAAQEVGDRRSVAHVVGTAALAATEQADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSAAAGTGSSRIGRRVPSTLQRIVRGPGRAGEPCHDLVRGEHARHAQSAPPARHSKHRGL HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHCCCCCCCHHHHHCCH ARSRRQRAEAVPPAMLRAGAPGRGPQPGPVPRRIAALLDAPLRGNRGLLLVALPAALAAA HHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH SCGVAVEALLDLPYRRVFAIAES HHHHHHHHHHHCCHHHHHEEECC >Mature Secondary Structure MVDQLLVSLVLAPAAGVVTSRILVDRLPPRVAVLGFTAAAVLFALASAASLLAFGMPAAA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH GLIGFAPDLRAVARSWQIAVAPLWASWMCLALGAAVIISVAVTGRRQYDSLRAARTEAAA HHHHCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC LPGTGEVVVIPDGRPDAFALPGAPGRIVVTEGMLTALGDGRHQALLAHERAHLAGRHHRF CCCCCCEEEEECCCCCCEECCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHHCCCCHHH AFTARLAAAALPALRPMVTLIDYAIERWADEQAAQEVGDRRSVAHVVGTAALAATEQADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSAAAGTGSSRIGRRVPSTLQRIVRGPGRAGEPCHDLVRGEHARHAQSAPPARHSKHRGL HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHCCCCCCCHHHHHCCH ARSRRQRAEAVPPAMLRAGAPGRGPQPGPVPRRIAALLDAPLRGNRGLLLVALPAALAAA HHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH SCGVAVEALLDLPYRRVFAIAES HHHHHHHHHHHCCHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA