| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316998
Identifier: 158316998
GI number: 158316998
Start: 6303469
End: 6304755
Strand: Reverse
Name: 158316998
Synonym: Franean1_5242
Alternate gene names: NA
Gene position: 6304755-6303469 (Counterclockwise)
Preceding gene: 158316999
Following gene: 158316997
Centisome position: 70.19
GC content: 70.16
Gene sequence:
>1287_bases ATGGCACGTTGGGCGCGCGCCCGCCGTGGAGTCGTGTGTACGGCCGTCGTCGGTGTCCTCGCCGCGGCGTTACCGGTCGC GGCCGGGCTCCCGGCCGCGCGGGCGGCCGGTGAGAACACATCCACCAATGTCGTCATCATCTGGGACCGCAATGCGCAGA CCGCGATCTGGGACGTCGCCGGCCAGCAGCCGCAGGTCCAGGCGCGCAGCTTCGCGATGGTGCACGGGGCCGTTTACGAC GCGGTGAACGCCATCGCCGGGCGGCCTTACCAGCCTTATCTGCTCGCCCCGCGGGCCAGCGGGCGCGAGTCGACGGACGC CGCCGTCGCGACCGCCGCCTTCCAGGTACTCAGCTCCCTGTTCCCGGCCCAGCGGCCGCGGCTGCAGACGCAGTACGACG AGTGGATGGCGAACCTTCCCGACGACGCGGCGAAGCGGAGCGGGACCGCCGTGGGTGGCCAGACCGCCGCAGCGATGATC AGTGCTCGGCAGAACGACGGGGCCTTCGGTAATCCGACCTGGCCGGTGGGCACCCAGCCCGGCCAGTGGCGGCCGACTCC GCCGACCTTCGCCTCCGACACGGCCTGGGTGGCGAACCTCAGGCCGTTCCTGATCCCGAGCGCGTCGATGTTCCGCTCGG CCGGGCCGCCGGCGCTGACCTCCGAGCGCTACGCCCGGGACCTCAACGAGGTCAAAACGATCGGCGCCGTCAACAGCACG ACCAGGACGCTCGACCAGACCCAGGCGGCGATCTGGTGGCACGACCGGCACCTGGGTGAATGGGAGATCAAGCGCCAGCT CGCCACGGGCCGCCGTCTGAGCACCCTGCAGACGGCCCGCATGTTCGCGATGGTCGACCTCACCGAGGCCGACGCGACGA CCGCCTGCTTCAACGAGAAGGCGGCCTGGACGTCCTGGCGGCCAGTCACCGCGATCCAGCTGGCCGACACCGACGGCAAC CCGGCAACCACCGCCGACCCGACCTGGGCACCGCTGCTCGTCACCCCGCCACACCCCGACTTCACGTCCGGGCACACCTG CTTCACGACGGCGAGCATGTCGACGCTGGCGTTCTTCTTCGGCCGGGACGACATCCCGTTCAGTGCGTACAGTGCCGATT CGGGTACCACACGCTATTTCCGTGGTTTCTCCCATGCCATCGCCGAGGTGATCGAGGCTCGCGTCTGGGGTGGCATCCAC ACTCGGTCGGCCGACACCGAGGGCGCGAAGATCGGCGCCAAGGTGACCGCCTACGCGACCAGGAACTATTTCCGCCCGCG GCGTTGA
Upstream 100 bases:
>100_bases TCGGTGCGGGGTACGCGCGCGCGACGAGGCGTGCCTCATCACGGCGGACTCGCGTCAATGCGGCAGTCGGTTTGGTTGAT TGCCAGCAAGGGGGTCAGTC
Downstream 100 bases:
>100_bases CCGGCCCGCACGGCGCGGCAAGCGGTACCCGGCGCCGGGTTGCCCGGCGGTTGCGACGGTGCCCTTTGTAGCCCCTGATC AGGCAATATGTGGTCGCGGT
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; Chloride Peroxidase; Phosphoesterase Pa-Phosphatase Related Protein; V-Chloroperoxidase; PA-Phosphatase-Like Phosphoesterase; Phosphoesterase PA-Phosphatase-Like Protein; VaNADium-Dependent Haloperoxidase Family Protein; PAP2 Superfamily Protein; Haloperoxidase; Phosphoesterase; VaNADium Chloroperoxidase; Acid Phosphatase/VaNADium-Dependent Haloperoxidase
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MARWARARRGVVCTAVVGVLAAALPVAAGLPAARAAGENTSTNVVIIWDRNAQTAIWDVAGQQPQVQARSFAMVHGAVYD AVNAIAGRPYQPYLLAPRASGRESTDAAVATAAFQVLSSLFPAQRPRLQTQYDEWMANLPDDAAKRSGTAVGGQTAAAMI SARQNDGAFGNPTWPVGTQPGQWRPTPPTFASDTAWVANLRPFLIPSASMFRSAGPPALTSERYARDLNEVKTIGAVNST TRTLDQTQAAIWWHDRHLGEWEIKRQLATGRRLSTLQTARMFAMVDLTEADATTACFNEKAAWTSWRPVTAIQLADTDGN PATTADPTWAPLLVTPPHPDFTSGHTCFTTASMSTLAFFFGRDDIPFSAYSADSGTTRYFRGFSHAIAEVIEARVWGGIH TRSADTEGAKIGAKVTAYATRNYFRPRR
Sequences:
>Translated_428_residues MARWARARRGVVCTAVVGVLAAALPVAAGLPAARAAGENTSTNVVIIWDRNAQTAIWDVAGQQPQVQARSFAMVHGAVYD AVNAIAGRPYQPYLLAPRASGRESTDAAVATAAFQVLSSLFPAQRPRLQTQYDEWMANLPDDAAKRSGTAVGGQTAAAMI SARQNDGAFGNPTWPVGTQPGQWRPTPPTFASDTAWVANLRPFLIPSASMFRSAGPPALTSERYARDLNEVKTIGAVNST TRTLDQTQAAIWWHDRHLGEWEIKRQLATGRRLSTLQTARMFAMVDLTEADATTACFNEKAAWTSWRPVTAIQLADTDGN PATTADPTWAPLLVTPPHPDFTSGHTCFTTASMSTLAFFFGRDDIPFSAYSADSGTTRYFRGFSHAIAEVIEARVWGGIH TRSADTEGAKIGAKVTAYATRNYFRPRR >Mature_427_residues ARWARARRGVVCTAVVGVLAAALPVAAGLPAARAAGENTSTNVVIIWDRNAQTAIWDVAGQQPQVQARSFAMVHGAVYDA VNAIAGRPYQPYLLAPRASGRESTDAAVATAAFQVLSSLFPAQRPRLQTQYDEWMANLPDDAAKRSGTAVGGQTAAAMIS ARQNDGAFGNPTWPVGTQPGQWRPTPPTFASDTAWVANLRPFLIPSASMFRSAGPPALTSERYARDLNEVKTIGAVNSTT RTLDQTQAAIWWHDRHLGEWEIKRQLATGRRLSTLQTARMFAMVDLTEADATTACFNEKAAWTSWRPVTAIQLADTDGNP ATTADPTWAPLLVTPPHPDFTSGHTCFTTASMSTLAFFFGRDDIPFSAYSADSGTTRYFRGFSHAIAEVIEARVWGGIHT RSADTEGAKIGAKVTAYATRNYFRPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46289; Mature: 46158
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARWARARRGVVCTAVVGVLAAALPVAAGLPAARAAGENTSTNVVIIWDRNAQTAIWDVA CCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCCCEEEEECC GQQPQVQARSFAMVHGAVYDAVNAIAGRPYQPYLLAPRASGRESTDAAVATAAFQVLSSL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH FPAQRPRLQTQYDEWMANLPDDAAKRSGTAVGGQTAAAMISARQNDGAFGNPTWPVGTQP CCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GQWRPTPPTFASDTAWVANLRPFLIPSASMFRSAGPPALTSERYARDLNEVKTIGAVNST CCCCCCCCCCCCCCHHHHCCCHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHH TRTLDQTQAAIWWHDRHLGEWEIKRQLATGRRLSTLQTARMFAMVDLTEADATTACFNEK HHHHHHHHEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCHHHHHCCC AAWTSWRPVTAIQLADTDGNPATTADPTWAPLLVTPPHPDFTSGHTCFTTASMSTLAFFF CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHH GRDDIPFSAYSADSGTTRYFRGFSHAIAEVIEARVWGGIHTRSADTEGAKIGAKVTAYAT CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEH RNYFRPRR HCCCCCCC >Mature Secondary Structure ARWARARRGVVCTAVVGVLAAALPVAAGLPAARAAGENTSTNVVIIWDRNAQTAIWDVA CCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCCCEEEEECC GQQPQVQARSFAMVHGAVYDAVNAIAGRPYQPYLLAPRASGRESTDAAVATAAFQVLSSL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH FPAQRPRLQTQYDEWMANLPDDAAKRSGTAVGGQTAAAMISARQNDGAFGNPTWPVGTQP CCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GQWRPTPPTFASDTAWVANLRPFLIPSASMFRSAGPPALTSERYARDLNEVKTIGAVNST CCCCCCCCCCCCCCHHHHCCCHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHH TRTLDQTQAAIWWHDRHLGEWEIKRQLATGRRLSTLQTARMFAMVDLTEADATTACFNEK HHHHHHHHEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCHHHHHCCC AAWTSWRPVTAIQLADTDGNPATTADPTWAPLLVTPPHPDFTSGHTCFTTASMSTLAFFF CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHHHHHHHH GRDDIPFSAYSADSGTTRYFRGFSHAIAEVIEARVWGGIHTRSADTEGAKIGAKVTAYAT CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEH RNYFRPRR HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA