| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316992
Identifier: 158316992
GI number: 158316992
Start: 6289329
End: 6292073
Strand: Reverse
Name: 158316992
Synonym: Franean1_5236
Alternate gene names: NA
Gene position: 6292073-6289329 (Counterclockwise)
Preceding gene: 158316993
Following gene: 158316991
Centisome position: 70.05
GC content: 71.88
Gene sequence:
>2745_bases ATGGGCCGCATCGACCAGAACGAGTACGCGTTCGCGAACGAGCGCGACGGTTTCGTCCTCGTCGCCAGCTCGATCGAGAA CCCGCCGGATCGCGGCTGGTGGTCGCAGTGGCTGGGCGGCTGGCAGAACATCAACCGCGCCAACCACGTCCGGCAGCCGT CCACCTCACGGGTCTACCTGCGCGACGACCAGCAGGGCGCCGTGGTCCTGCGCCAGCAGACCGGCTCGGACTCCCGGCGG GACATGCGGGTGAGCGTTCTGGTCGGCTCCGCCGAGGACCTCACCGGATGGGGGGCGGCGCGGCTGGCGCACTGGCCCGT CGGCCGGCAGCTGACCGACCCTGACCAGAGCGGGGTGGCGTTGATCGCGCGGCCGGACCTCACGGCCTACACCGGTGCGA ACGTCGTCCGGCTGCAGGAGGCGGTCCTGGCGGACGCTCTGGAGCTGACCTCACCGGTGTCCGGGCGCGGGAACATCGTC CTGGTGAACCCGCTGGCGGCCCTGCTCGCGGCAGTACTGAAGCTGCGAGCCGAGTCTGTGGGCGGCGCACCCGTCTTCGG TGGGCGACGGCAGCTCGTGCCGGTCGGCGCGGACGAGCCCGCGGCGGCGGCGCTCGTCCTGGTCCTCACGGAGCTGCTGC GGCACATCGGCGACGGCCGCGACCGGCTGACGTACTCGACGTTCGAGGCCACCTACCCGCGCGTCGGTGCCCATCAGCGC GATCCACAGGTTCTGTTCATGCCGGACTTCGTGCAGCCGGAGCGTGGCCTCACCCGGCCGGTCGCGTATGTCTTCCTTGC TCCCGGACTGCGTGAGGACCATCAGCCGTACGTGCGCGACGGTGCCGCCGGGGACGGTCCGTTCGAGTACATCGCCAGAG TTGTGGTCTGGGCATACCTGCAGCGTGAGCTGGCGCATTTTCCTCGGCTGAACGACAGCCTGCTGCGGCAGCCGGAGAAC TGGGCCGGGGCGGTGGAGGACTGGGCGATCCGGAAGGGCGGCCCGCCGCGGAGCCAGCCGGTCATCCTGCCGACCGAGCC GACGATCCCGGCTGGTTCCCGTCAGGTCGCGCCCCTCGGAGAGCCACACGGGCAGCGATGGAGGCACGCGGAGGCCCAGG CTGGCGACGGGCGTCCGGAGGACGCATGGGGCCAGCCCCGACCGGGCGACGGGCCACGGGTACCTGAGGCCTTCTCCGTG TCGGCGGCCGCGCCGACAGCCGTGCCGGTGGCCGGGACCACCGCCGCCGAGCAGACGCGGCACGCCGAGGACACGCTGCG CCGGGCGATCGCCAACCTGCACAACGGCCTGGTCGGGGAGACGACGCACACGGTCGACGCGTTCGTCCGGGCGTTGCGCA GCCGCCAGTGGCTGACGCCGGTGGAGCGCAACCATGTTCGGAAGTTCCTGATGTGGGTGATGCCCGGGCTGGCTCCACGT GCCGCCAGGGAACCCTACGAGGAGATGACGGACCCCGGCCTGCGACGCATTCGACCGTCGGCCGTCGACGCGCTGGCCCG CCTGGCCAGCCCGGACGCCACCACGATCCCCGCCTCCGTGGACGTCGTCGACTGCCTGGCCGGGGTGCTGGAACTCGAAT CGGGGAACGCCCTGCTGCTCGCGGAGACGCGCGACGCGCTTCTTCTGCTGGTACATGTCCCGACGGCGCCCGAGCATGCC GGCGAGGACAGGCGGCCGAAAGAGCCGTCGTCCGAGCTGGCACCTCGCCACGCCGACCGCGCGCGTCCGTGGCGGCCGGA CCTGGCGGTTGCCCGAGCGCTGACGGAGCAGGCTGAGGACACCCCCATCAGCCACGCCGACCCCGGCCCGCCTGCCGTCA GCGAACAGGAGCGCGTTCACCAGGCATTTGTCGACCATCTCCTCGGACTTGTGCGGTGGGCCACCGCGGTCGTCCCCGGG CTTTCCATGCGTGACGGCCTGCTGACGACCGCGAGCCTGCCGGCGACCGCGGCCTGGCTGCCCGCGGAGAACGCTCTCCC GCTTCGGCGGGTTGTCCGGCGGTTGGCCGGCTCCGAGAACGACGGGTTGCCCCTGGAGAGTCCCCGGGTCGACGCGCTCG CGCAGGCGCCGGACCAGACGGCGGCGGTGCGCCTGCTGCAGGACAGGATCGGGACGGATCTCGTCAGCCGCACGGACCAC CTTTTCGGCCGGGAATCGCGGCTGTCGGCAGACCAGCTCGTGTATGACCTGACGGCCGCGCTGACCGAGGCGCCGGGTGC CCAGAACATGCTGAGTGACGAGTTCGTCGGGGCCGTTGAGACGCTCCGGGCCCAGCTGCTTCACGTGGTGGAGCGGGCCG CTCAGACCGAGCCGCGTGAGCCGGCCGTCCGGCCGGACCCACGGGACGCGGACGAACCGGCCGCAGCCAGCGTGTCGGCG TCCGAGGCTTCGGTCGGCTCGCCGCACGAGGTCTTCGCGGGTCTCATAAACGAGCTGGCGAACGCGAAGATCGGAGACGA GCTGTCGCCGGTGTCCGCCTGGTTCGCCGAGACGCTGCCAAAGGCCTGGCCCGACTCCGCCGGGCACTCCCTGAAGGTCG CGGGCCTGCTGGACCAGCGGATCGAGCTCACCTCCGGCGACGAAGCCGAATCCACCGGTTCCGACGAGGCTGACTCCTCC GTCGGCGGTAGGTACGGCCTGCTCGGTGGCTGGCGCGAATACAGGTACGCCCTCGCCCTTCTGGCGGCTTGCCTGATCAC CGGCCTGGCGGCGCTGTGGCGGTGA
Upstream 100 bases:
>100_bases CGCGCGGTGTCCGGCCCAGGCGGGTACTCGACCCGCTCGCGGCCATCTTCGCGATGTCCGGCCTGCTCGGGGAGGACGCC GCCAAGGAGGTCGGGACCTG
Downstream 100 bases:
>100_bases CTGCGACCAAGCCCGCCCTCGACACCCGGTCCCGGGACGCCGGGAAACCGGCCCCCGACACGGAGCCCGAATCCGCCCGG TTCCCGCTGCCGTGGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 914; Mature: 913
Protein sequence:
>914_residues MGRIDQNEYAFANERDGFVLVASSIENPPDRGWWSQWLGGWQNINRANHVRQPSTSRVYLRDDQQGAVVLRQQTGSDSRR DMRVSVLVGSAEDLTGWGAARLAHWPVGRQLTDPDQSGVALIARPDLTAYTGANVVRLQEAVLADALELTSPVSGRGNIV LVNPLAALLAAVLKLRAESVGGAPVFGGRRQLVPVGADEPAAAALVLVLTELLRHIGDGRDRLTYSTFEATYPRVGAHQR DPQVLFMPDFVQPERGLTRPVAYVFLAPGLREDHQPYVRDGAAGDGPFEYIARVVVWAYLQRELAHFPRLNDSLLRQPEN WAGAVEDWAIRKGGPPRSQPVILPTEPTIPAGSRQVAPLGEPHGQRWRHAEAQAGDGRPEDAWGQPRPGDGPRVPEAFSV SAAAPTAVPVAGTTAAEQTRHAEDTLRRAIANLHNGLVGETTHTVDAFVRALRSRQWLTPVERNHVRKFLMWVMPGLAPR AAREPYEEMTDPGLRRIRPSAVDALARLASPDATTIPASVDVVDCLAGVLELESGNALLLAETRDALLLLVHVPTAPEHA GEDRRPKEPSSELAPRHADRARPWRPDLAVARALTEQAEDTPISHADPGPPAVSEQERVHQAFVDHLLGLVRWATAVVPG LSMRDGLLTTASLPATAAWLPAENALPLRRVVRRLAGSENDGLPLESPRVDALAQAPDQTAAVRLLQDRIGTDLVSRTDH LFGRESRLSADQLVYDLTAALTEAPGAQNMLSDEFVGAVETLRAQLLHVVERAAQTEPREPAVRPDPRDADEPAAASVSA SEASVGSPHEVFAGLINELANAKIGDELSPVSAWFAETLPKAWPDSAGHSLKVAGLLDQRIELTSGDEAESTGSDEADSS VGGRYGLLGGWREYRYALALLAACLITGLAALWR
Sequences:
>Translated_914_residues MGRIDQNEYAFANERDGFVLVASSIENPPDRGWWSQWLGGWQNINRANHVRQPSTSRVYLRDDQQGAVVLRQQTGSDSRR DMRVSVLVGSAEDLTGWGAARLAHWPVGRQLTDPDQSGVALIARPDLTAYTGANVVRLQEAVLADALELTSPVSGRGNIV LVNPLAALLAAVLKLRAESVGGAPVFGGRRQLVPVGADEPAAAALVLVLTELLRHIGDGRDRLTYSTFEATYPRVGAHQR DPQVLFMPDFVQPERGLTRPVAYVFLAPGLREDHQPYVRDGAAGDGPFEYIARVVVWAYLQRELAHFPRLNDSLLRQPEN WAGAVEDWAIRKGGPPRSQPVILPTEPTIPAGSRQVAPLGEPHGQRWRHAEAQAGDGRPEDAWGQPRPGDGPRVPEAFSV SAAAPTAVPVAGTTAAEQTRHAEDTLRRAIANLHNGLVGETTHTVDAFVRALRSRQWLTPVERNHVRKFLMWVMPGLAPR AAREPYEEMTDPGLRRIRPSAVDALARLASPDATTIPASVDVVDCLAGVLELESGNALLLAETRDALLLLVHVPTAPEHA GEDRRPKEPSSELAPRHADRARPWRPDLAVARALTEQAEDTPISHADPGPPAVSEQERVHQAFVDHLLGLVRWATAVVPG LSMRDGLLTTASLPATAAWLPAENALPLRRVVRRLAGSENDGLPLESPRVDALAQAPDQTAAVRLLQDRIGTDLVSRTDH LFGRESRLSADQLVYDLTAALTEAPGAQNMLSDEFVGAVETLRAQLLHVVERAAQTEPREPAVRPDPRDADEPAAASVSA SEASVGSPHEVFAGLINELANAKIGDELSPVSAWFAETLPKAWPDSAGHSLKVAGLLDQRIELTSGDEAESTGSDEADSS VGGRYGLLGGWREYRYALALLAACLITGLAALWR >Mature_913_residues GRIDQNEYAFANERDGFVLVASSIENPPDRGWWSQWLGGWQNINRANHVRQPSTSRVYLRDDQQGAVVLRQQTGSDSRRD MRVSVLVGSAEDLTGWGAARLAHWPVGRQLTDPDQSGVALIARPDLTAYTGANVVRLQEAVLADALELTSPVSGRGNIVL VNPLAALLAAVLKLRAESVGGAPVFGGRRQLVPVGADEPAAAALVLVLTELLRHIGDGRDRLTYSTFEATYPRVGAHQRD PQVLFMPDFVQPERGLTRPVAYVFLAPGLREDHQPYVRDGAAGDGPFEYIARVVVWAYLQRELAHFPRLNDSLLRQPENW AGAVEDWAIRKGGPPRSQPVILPTEPTIPAGSRQVAPLGEPHGQRWRHAEAQAGDGRPEDAWGQPRPGDGPRVPEAFSVS AAAPTAVPVAGTTAAEQTRHAEDTLRRAIANLHNGLVGETTHTVDAFVRALRSRQWLTPVERNHVRKFLMWVMPGLAPRA AREPYEEMTDPGLRRIRPSAVDALARLASPDATTIPASVDVVDCLAGVLELESGNALLLAETRDALLLLVHVPTAPEHAG EDRRPKEPSSELAPRHADRARPWRPDLAVARALTEQAEDTPISHADPGPPAVSEQERVHQAFVDHLLGLVRWATAVVPGL SMRDGLLTTASLPATAAWLPAENALPLRRVVRRLAGSENDGLPLESPRVDALAQAPDQTAAVRLLQDRIGTDLVSRTDHL FGRESRLSADQLVYDLTAALTEAPGAQNMLSDEFVGAVETLRAQLLHVVERAAQTEPREPAVRPDPRDADEPAAASVSAS EASVGSPHEVFAGLINELANAKIGDELSPVSAWFAETLPKAWPDSAGHSLKVAGLLDQRIELTSGDEAESTGSDEADSSV GGRYGLLGGWREYRYALALLAACLITGLAALWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98790; Mature: 98659
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRIDQNEYAFANERDGFVLVASSIENPPDRGWWSQWLGGWQNINRANHVRQPSTSRVYL CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEE RDDQQGAVVLRQQTGSDSRRDMRVSVLVGSAEDLTGWGAARLAHWPVGRQLTDPDQSGVA EECCCCCEEEEECCCCCCCCCEEEEEEECCCHHCCCCCHHHHHHCCCCCCCCCCCCCCEE LIARPDLTAYTGANVVRLQEAVLADALELTSPVSGRGNIVLVNPLAALLAAVLKLRAESV EEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHC GGAPVFGGRRQLVPVGADEPAAAALVLVLTELLRHIGDGRDRLTYSTFEATYPRVGAHQR CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCC DPQVLFMPDFVQPERGLTRPVAYVFLAPGLREDHQPYVRDGAAGDGPFEYIARVVVWAYL CCCEEECCCCCCCCCCCCCCEEHEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH QRELAHFPRLNDSLLRQPENWAGAVEDWAIRKGGPPRSQPVILPTEPTIPAGSRQVAPLG HHHHHHCCCCCHHHHCCCCHHCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCC EPHGQRWRHAEAQAGDGRPEDAWGQPRPGDGPRVPEAFSVSAAAPTAVPVAGTTAAEQTR CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHH HAEDTLRRAIANLHNGLVGETTHTVDAFVRALRSRQWLTPVERNHVRKFLMWVMPGLAPR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCH AAREPYEEMTDPGLRRIRPSAVDALARLASPDATTIPASVDVVDCLAGVLELESGNALLL HHCCCHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCEEEE AETRDALLLLVHVPTAPEHAGEDRRPKEPSSELAPRHADRARPWRPDLAVARALTEQAED EECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC TPISHADPGPPAVSEQERVHQAFVDHLLGLVRWATAVVPGLSMRDGLLTTASLPATAAWL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC PAENALPLRRVVRRLAGSENDGLPLESPRVDALAQAPDQTAAVRLLQDRIGTDLVSRTDH CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LFGRESRLSADQLVYDLTAALTEAPGAQNMLSDEFVGAVETLRAQLLHVVERAAQTEPRE HHCCHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAVRPDPRDADEPAAASVSASEASVGSPHEVFAGLINELANAKIGDELSPVSAWFAETLP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC KAWPDSAGHSLKVAGLLDQRIELTSGDEAESTGSDEADSSVGGRYGLLGGWREYRYALAL CCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHH LAACLITGLAALWR HHHHHHHHHHHHCC >Mature Secondary Structure GRIDQNEYAFANERDGFVLVASSIENPPDRGWWSQWLGGWQNINRANHVRQPSTSRVYL CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEE RDDQQGAVVLRQQTGSDSRRDMRVSVLVGSAEDLTGWGAARLAHWPVGRQLTDPDQSGVA EECCCCCEEEEECCCCCCCCCEEEEEEECCCHHCCCCCHHHHHHCCCCCCCCCCCCCCEE LIARPDLTAYTGANVVRLQEAVLADALELTSPVSGRGNIVLVNPLAALLAAVLKLRAESV EEECCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHC GGAPVFGGRRQLVPVGADEPAAAALVLVLTELLRHIGDGRDRLTYSTFEATYPRVGAHQR CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCCCCC DPQVLFMPDFVQPERGLTRPVAYVFLAPGLREDHQPYVRDGAAGDGPFEYIARVVVWAYL CCCEEECCCCCCCCCCCCCCEEHEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH QRELAHFPRLNDSLLRQPENWAGAVEDWAIRKGGPPRSQPVILPTEPTIPAGSRQVAPLG HHHHHHCCCCCHHHHCCCCHHCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCC EPHGQRWRHAEAQAGDGRPEDAWGQPRPGDGPRVPEAFSVSAAAPTAVPVAGTTAAEQTR CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHH HAEDTLRRAIANLHNGLVGETTHTVDAFVRALRSRQWLTPVERNHVRKFLMWVMPGLAPR HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCH AAREPYEEMTDPGLRRIRPSAVDALARLASPDATTIPASVDVVDCLAGVLELESGNALLL HHCCCHHHHCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEECCCCEEEE AETRDALLLLVHVPTAPEHAGEDRRPKEPSSELAPRHADRARPWRPDLAVARALTEQAED EECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC TPISHADPGPPAVSEQERVHQAFVDHLLGLVRWATAVVPGLSMRDGLLTTASLPATAAWL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC PAENALPLRRVVRRLAGSENDGLPLESPRVDALAQAPDQTAAVRLLQDRIGTDLVSRTDH CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LFGRESRLSADQLVYDLTAALTEAPGAQNMLSDEFVGAVETLRAQLLHVVERAAQTEPRE HHCCHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAVRPDPRDADEPAAASVSASEASVGSPHEVFAGLINELANAKIGDELSPVSAWFAETLP CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC KAWPDSAGHSLKVAGLLDQRIELTSGDEAESTGSDEADSSVGGRYGLLGGWREYRYALAL CCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHH LAACLITGLAALWR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA