| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316983
Identifier: 158316983
GI number: 158316983
Start: 6277820
End: 6278476
Strand: Direct
Name: 158316983
Synonym: Franean1_5227
Alternate gene names: NA
Gene position: 6277820-6278476 (Clockwise)
Preceding gene: 158316977
Following gene: 158316988
Centisome position: 69.89
GC content: 75.8
Gene sequence:
>657_bases GTGAACCCGGGCGCCGTCGGGCAGGCGATCGGCCTGTTCGCCGTCACCAACATCGACGACATCCTGGTGCTGGCGCTGTT CTTCGCCCGCGGCGCCGGTGACCGGCGCGCCGTGCCGCGGATCGTCGCCGGCCAGTACGTCGGGTTCGTCGGAATCGTCG CCGTCGCCGCCGCCGCCGCGTCCGGAGCGGCGCTCCTGCCCGAGTCCGCGATCGCCTACCTCGGCCTGCTCCCGCTCGCC CTGGGCCTACGCGCGGCCCGGCGGTCCCTGGCGGAACGCGGCGACCACGCGGCCGCGACGACCGGAGATCCCGCCGGCCC CGACCCCGATGACGAGGCCGGGGGTGAGGAGCAGGACAGGGACGCTTCGCGCAGGGGGCCGGCCGCGCTCGAGGTCGCCG CGGTCACCTTCGCGAACGGCGGCGACAACCTCGGCGTGTACGTCCCGGTCTTCACCGCGGTCGGCGCGGGCGGGACGGCC GTCCACGCGGTGGTCTTCCTCGTGCTGGTGGGCGTCTGGTGCGCGGCCGGCTGGTTCCTTGCCACGAGGCCGCCGGTCGC CCGCGCGCTGAGCCGCTGGGGGCACCTGCTGCTGCCGCTGGCCCTGGTTGCCATCGGCCTGACGATCCTCGTCGAGGGCG GGGCCTTCGGTCTCTGA
Upstream 100 bases:
>100_bases GTCGCGAACCGCGTCACAGCCGTGGCGAACCGCCGGTCAGCGGCCGGGAACACGCCCGGTACGGTCGGCCGGTGCCGTTT GCCCCGCCCGTCGCGACCGC
Downstream 100 bases:
>100_bases CCGAAGCCCACCCCGCGGCGGAAGCCCGTGCTGCGGCAGGAGCGCGCCCCCGGGCGGGAGCACGCCGCCCGGCCTCAGGT ACCGGCGCCGTCCAGGGGGC
Product: cadmium resistance transporter
Products: NA
Alternate protein names: Permease Cadmium Resistance Protein; Cadmium Resistance Protein; Permease Cadmium Resistance Protein-Like Protein; Cadmium Resistance Transporter; LOW QUALITY PROTEIN Cadmium Resistance Transporter
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNPGAVGQAIGLFAVTNIDDILVLALFFARGAGDRRAVPRIVAGQYVGFVGIVAVAAAAASGAALLPESAIAYLGLLPLA LGLRAARRSLAERGDHAAATTGDPAGPDPDDEAGGEEQDRDASRRGPAALEVAAVTFANGGDNLGVYVPVFTAVGAGGTA VHAVVFLVLVGVWCAAGWFLATRPPVARALSRWGHLLLPLALVAIGLTILVEGGAFGL
Sequences:
>Translated_218_residues MNPGAVGQAIGLFAVTNIDDILVLALFFARGAGDRRAVPRIVAGQYVGFVGIVAVAAAAASGAALLPESAIAYLGLLPLA LGLRAARRSLAERGDHAAATTGDPAGPDPDDEAGGEEQDRDASRRGPAALEVAAVTFANGGDNLGVYVPVFTAVGAGGTA VHAVVFLVLVGVWCAAGWFLATRPPVARALSRWGHLLLPLALVAIGLTILVEGGAFGL >Mature_218_residues MNPGAVGQAIGLFAVTNIDDILVLALFFARGAGDRRAVPRIVAGQYVGFVGIVAVAAAAASGAALLPESAIAYLGLLPLA LGLRAARRSLAERGDHAAATTGDPAGPDPDDEAGGEEQDRDASRRGPAALEVAAVTFANGGDNLGVYVPVFTAVGAGGTA VHAVVFLVLVGVWCAAGWFLATRPPVARALSRWGHLLLPLALVAIGLTILVEGGAFGL
Specific function: Unknown
COG id: COG4300
COG function: function code P; Predicted permease, cadmium resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21893; Mature: 21893
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPGAVGQAIGLFAVTNIDDILVLALFFARGAGDRRAVPRIVAGQYVGFVGIVAVAAAAA CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SGAALLPESAIAYLGLLPLALGLRAARRSLAERGDHAAATTGDPAGPDPDDEAGGEEQDR CCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH DASRRGPAALEVAAVTFANGGDNLGVYVPVFTAVGAGGTAVHAVVFLVLVGVWCAAGWFL HHHHCCCCCEEEEEEEEECCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHH ATRPPVARALSRWGHLLLPLALVAIGLTILVEGGAFGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MNPGAVGQAIGLFAVTNIDDILVLALFFARGAGDRRAVPRIVAGQYVGFVGIVAVAAAAA CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SGAALLPESAIAYLGLLPLALGLRAARRSLAERGDHAAATTGDPAGPDPDDEAGGEEQDR CCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH DASRRGPAALEVAAVTFANGGDNLGVYVPVFTAVGAGGTAVHAVVFLVLVGVWCAAGWFL HHHHCCCCCEEEEEEEEECCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHH ATRPPVARALSRWGHLLLPLALVAIGLTILVEGGAFGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA