| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316975
Identifier: 158316975
GI number: 158316975
Start: 6264746
End: 6265735
Strand: Reverse
Name: 158316975
Synonym: Franean1_5219
Alternate gene names: NA
Gene position: 6265735-6264746 (Counterclockwise)
Preceding gene: 158316976
Following gene: 158316974
Centisome position: 69.76
GC content: 66.16
Gene sequence:
>990_bases ATGATCCGGAGTATCAGGATATTCCGACGCCTCGCTAGGTCGTCGCCGCCGGAAGGTCCCGGGCCTACTGGGGGGTTCTG GCAGTGTTCTCCGCTCGGCACGATCCAGGAACGCGGACCGACTCGCCCGGCATCTTCTCGGGCTGAGTGCGTGCCGGCGC CGTCCCGCGTGATCGAGGTGGCACATGCGGGAGCCCGCGTACAGCGGAAACGCGAAGAGTCGACGGGCGACGGGCGGTAC CGGGGCGTGAGCCGCGCTGCCTGCACGGCCGGTGCAACCAAAGGGATCGGAAGCAACGAAGCCTGGGTGAGATCGGTAGG CCGCCTGTGGGCGCGACTGCTGCGCCGAGCCGGCCTGGATCCGGAGGCGGCCGTTGCCGAGATCGGGCCAGGGTTTTCGG CGAAGGTTGCCTTCGGCTTGTCTGACCTCGGGTTCCGGGGCACTGTGATCCTCGTCGAACCGAATGAGGAGGCTGGCGCG TGGGCGGCCGCGGAATATCGCCGGCTTCTTCCGGACGCCGAGATCCGCGTGATGAGTGAACAGGTCCCGGACGCGGGAGC GCTGGCCGGACAGAACACGGATTTCCTGGTCGCGAACCACGTGATCGACGACCTGCTTCTCGACACCTACATCGAGGCGG ACGAGCGGGCGAGTATCTTCGGCAGGATGGGTCCCGGATCGGCCTGCTCGAGTACGTTCGTCCAGGCCTGGCACCGGATG CTGGCCACTGACACCCTGAGTGAAACGCTGTCCGAGCAGGTCGCAGCGAATCTCAGTCACTATGTGGAGCTGGTCCGGCC ACGCTGCCTCTTCCTGAACGACTACCCGAGCTGGCGCCATCGACAGCACGGCCTGGAACCCATCAGTAAGGTCAGTCGCC AGACGATGGATCGCCTGCGGTATGAGCTTGTGAACTCGCGAGCGGACACGGCGCTTCTTCGTCGCCCACCCGGCGGTCGC GGGTTCTCCTGGCTTGTATCGCCGAGCTGA
Upstream 100 bases:
>100_bases AGCCTCACCGGCCGGGATCTCCCTGCTTCCGACTCCTGGAGTCCGGCCTGCGTAACTGGCATCCAGCGGCGGGCCGCTTG TGGCGTGACTGTGACGCGCT
Downstream 100 bases:
>100_bases CCCAGCCGACCAGTGAGGGAACCATTATGGGACGTCTGAATATCAGATCGATACATACAATCTTTCGTGACTACTTTCGG ATCGACGAGGCGTGGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MIRSIRIFRRLARSSPPEGPGPTGGFWQCSPLGTIQERGPTRPASSRAECVPAPSRVIEVAHAGARVQRKREESTGDGRY RGVSRAACTAGATKGIGSNEAWVRSVGRLWARLLRRAGLDPEAAVAEIGPGFSAKVAFGLSDLGFRGTVILVEPNEEAGA WAAAEYRRLLPDAEIRVMSEQVPDAGALAGQNTDFLVANHVIDDLLLDTYIEADERASIFGRMGPGSACSSTFVQAWHRM LATDTLSETLSEQVAANLSHYVELVRPRCLFLNDYPSWRHRQHGLEPISKVSRQTMDRLRYELVNSRADTALLRRPPGGR GFSWLVSPS
Sequences:
>Translated_329_residues MIRSIRIFRRLARSSPPEGPGPTGGFWQCSPLGTIQERGPTRPASSRAECVPAPSRVIEVAHAGARVQRKREESTGDGRY RGVSRAACTAGATKGIGSNEAWVRSVGRLWARLLRRAGLDPEAAVAEIGPGFSAKVAFGLSDLGFRGTVILVEPNEEAGA WAAAEYRRLLPDAEIRVMSEQVPDAGALAGQNTDFLVANHVIDDLLLDTYIEADERASIFGRMGPGSACSSTFVQAWHRM LATDTLSETLSEQVAANLSHYVELVRPRCLFLNDYPSWRHRQHGLEPISKVSRQTMDRLRYELVNSRADTALLRRPPGGR GFSWLVSPS >Mature_329_residues MIRSIRIFRRLARSSPPEGPGPTGGFWQCSPLGTIQERGPTRPASSRAECVPAPSRVIEVAHAGARVQRKREESTGDGRY RGVSRAACTAGATKGIGSNEAWVRSVGRLWARLLRRAGLDPEAAVAEIGPGFSAKVAFGLSDLGFRGTVILVEPNEEAGA WAAAEYRRLLPDAEIRVMSEQVPDAGALAGQNTDFLVANHVIDDLLLDTYIEADERASIFGRMGPGSACSSTFVQAWHRM LATDTLSETLSEQVAANLSHYVELVRPRCLFLNDYPSWRHRQHGLEPISKVSRQTMDRLRYELVNSRADTALLRRPPGGR GFSWLVSPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35959; Mature: 35959
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSIRIFRRLARSSPPEGPGPTGGFWQCSPLGTIQERGPTRPASSRAECVPAPSRVIEV CCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH AHAGARVQRKREESTGDGRYRGVSRAACTAGATKGIGSNEAWVRSVGRLWARLLRRAGLD HHHHHHHHHHHHCCCCCCHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PEAAVAEIGPGFSAKVAFGLSDLGFRGTVILVEPNEEAGAWAAAEYRRLLPDAEIRVMSE HHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHH QVPDAGALAGQNTDFLVANHVIDDLLLDTYIEADERASIFGRMGPGSACSSTFVQAWHRM HCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHH LATDTLSETLSEQVAANLSHYVELVRPRCLFLNDYPSWRHRQHGLEPISKVSRQTMDRLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHH YELVNSRADTALLRRPPGGRGFSWLVSPS HHHHHHHHHHHHHCCCCCCCCCEEEECCC >Mature Secondary Structure MIRSIRIFRRLARSSPPEGPGPTGGFWQCSPLGTIQERGPTRPASSRAECVPAPSRVIEV CCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH AHAGARVQRKREESTGDGRYRGVSRAACTAGATKGIGSNEAWVRSVGRLWARLLRRAGLD HHHHHHHHHHHHCCCCCCHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PEAAVAEIGPGFSAKVAFGLSDLGFRGTVILVEPNEEAGAWAAAEYRRLLPDAEIRVMSE HHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHH QVPDAGALAGQNTDFLVANHVIDDLLLDTYIEADERASIFGRMGPGSACSSTFVQAWHRM HCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHH LATDTLSETLSEQVAANLSHYVELVRPRCLFLNDYPSWRHRQHGLEPISKVSRQTMDRLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHH YELVNSRADTALLRRPPGGRGFSWLVSPS HHHHHHHHHHHHHCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA