| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is wecB [H]
Identifier: 158316958
GI number: 158316958
Start: 6244734
End: 6246488
Strand: Reverse
Name: wecB [H]
Synonym: Franean1_5202
Alternate gene names: 158316958
Gene position: 6246488-6244734 (Counterclockwise)
Preceding gene: 158316959
Following gene: 158316956
Centisome position: 69.54
GC content: 72.48
Gene sequence:
>1755_bases ATGGGGGTGTCCCACCGGATACCGGCGGCCAGGCCCAGGCCGCAGACCGGCCACACCGCGACCTCTCCCAACACGACCGG GCTGGACGACGGCGGTGCCGGCGGTCAGACCGTGCCCGGTCAGGGCGCCAGGGGCCAGAGCATTCCCGGCCAGGGTGCCG GCGGGCCGGGTGTCCCAGGTCAGGGTGCCGGCGGGCCGGGCGTCGGGGCCCAGGGCGTCGGTGGTCAGAACGTCGGTGGT CAGGGCGCCGAGGAACAGAACGTCGCGGACCAGGGCGCCGCGGGAGAGAGCACCGCCGGGTGGGGGCCGGCGGAACGAGG AGGAATGACCGCAATGACCGGGACGGCGGGAACGACCGCACGAACAGGTCCCTCTGTGCCGACCGCGCCGTCCACGCCGA TCGCCCCGACCGGGCCGACCGTTCCCACGGTCCCGAACCGGCGCCTCCCCCCGGACCGCCAGGGCGCGGCCGGCCGGATG ACCATGCCCGACCGGGTGCCGCGCACGGAGATCATGGGAGTTCCCGCGCCGGTGCCGCGCGGCCGACCCGGGCCGGCCGA GCACCGGGCGCGGGTCATGATCCTGGTCGGCACCCGTCCGGAGATCGTGAAGCTGAGCCGAATCATCGCGGCGCTCGAGC GGGCCGTGGACGTCTGCCTGGTCCACTCGGGCCAGCACTATGACTACGAGCTGAACCAGGTGTTCTTCGACGAGCTCGGT ATCCGCAAACCGGACCACTTCCTCGACGCTGTCGGCGCGAGCGCCGCCGAGACCATCGGCCGGGTGATCGCCCGCTCCGA CGCGGTGTTCGTCGACGAGTCCCCGGACGCGCTGCTGCTCTACGGGGACACGAACACCACGCTCGCGGTCATTGCGGCCC GGCGGCGGCACATCCCGGTGTTCCACCTGGAGGCCGGGAACCGCTGTTTCGACGACCGGGTCCCGGAGGAGATCAACCGC CGGCTGGTCGACCACCTCAGCGACATCAACCTCCCGCTCACCGAGCACGCGCGGCGCCACCTGCTGGCCGAGGGCCTGCC GGCGCAGCGGATCTTCGTCACGGGCTCGCCGATGAAGGAGGTCCTCGACCACTACGCGCCGCTCGTCGACGCCTCACCAG TGCTCACGAACCTCGGTGTCACCGCGGGCCACTTCCTGGTGGTCAGCGCGCACCGGGAGGAGAACGTCGACGCGCCGGAG CTGCTCATCGGCCTGCTGGAGACACTCAACGCGCTGGCCGCCCGCTACCGGGTGCCGATCATCGTCTCCACCCACCCGCG TACCCGGGATCGTCTCGACGCCCTTGAGGCGTCCGGCCGCGCCCCTGCGACCGACGGCCTCGTCCGTTTCTGCCGGCCCT TCGGGTTCGCGGACTACATCGCGTTGCAGCGGGCGGCGCAGTGCGTGATCTCGGACAGCGGCTCGCTGACCGAGGAGGCC TCGCTGCTCGGGTTCCCCGCGGTGATGATCCGGGAGGCGCACGAGCGCCCTGAGGGCGTCGACCACGGAGTGGCGGTCTC CTGCCTGCCCCGGCCGGACCGGGTCCTCGCCGCGGTCGACCTGGTCGTCGACGCGGCGCAGGGGGACCGGGCACCGCGGA TCGTCCCCGATTACGACGTGGACGACGTCTCCCGCCGCGTCGTACGGATCATCGTCAGCCACATCGACTACGTCCGCCGC ACCGTCTGGTTCGAGCGCCCACCAGTCGGGACCAGCGAACCAACGCCCGGAGGCACCTCCCTGACCCTCCCGTAG
Upstream 100 bases:
>100_bases TGGCGGGGACGTCCGGCGTGATTCCGACGTGCGGCGTGACCCGGATGCCCGGCGTGATGCGGACGTCCGGCGTGATCCAG GTGTCGCCGGGGAGCCCGAC
Downstream 100 bases:
>100_bases CCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCCTGGCCCGGCTGGGCCGGGGTCAGGCGGGCCAGGGCCGCATC GCGGAGCCGGAAGCGGGGCC
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 584; Mature: 583
Protein sequence:
>584_residues MGVSHRIPAARPRPQTGHTATSPNTTGLDDGGAGGQTVPGQGARGQSIPGQGAGGPGVPGQGAGGPGVGAQGVGGQNVGG QGAEEQNVADQGAAGESTAGWGPAERGGMTAMTGTAGTTARTGPSVPTAPSTPIAPTGPTVPTVPNRRLPPDRQGAAGRM TMPDRVPRTEIMGVPAPVPRGRPGPAEHRARVMILVGTRPEIVKLSRIIAALERAVDVCLVHSGQHYDYELNQVFFDELG IRKPDHFLDAVGASAAETIGRVIARSDAVFVDESPDALLLYGDTNTTLAVIAARRRHIPVFHLEAGNRCFDDRVPEEINR RLVDHLSDINLPLTEHARRHLLAEGLPAQRIFVTGSPMKEVLDHYAPLVDASPVLTNLGVTAGHFLVVSAHREENVDAPE LLIGLLETLNALAARYRVPIIVSTHPRTRDRLDALEASGRAPATDGLVRFCRPFGFADYIALQRAAQCVISDSGSLTEEA SLLGFPAVMIREAHERPEGVDHGVAVSCLPRPDRVLAAVDLVVDAAQGDRAPRIVPDYDVDDVSRRVVRIIVSHIDYVRR TVWFERPPVGTSEPTPGGTSLTLP
Sequences:
>Translated_584_residues MGVSHRIPAARPRPQTGHTATSPNTTGLDDGGAGGQTVPGQGARGQSIPGQGAGGPGVPGQGAGGPGVGAQGVGGQNVGG QGAEEQNVADQGAAGESTAGWGPAERGGMTAMTGTAGTTARTGPSVPTAPSTPIAPTGPTVPTVPNRRLPPDRQGAAGRM TMPDRVPRTEIMGVPAPVPRGRPGPAEHRARVMILVGTRPEIVKLSRIIAALERAVDVCLVHSGQHYDYELNQVFFDELG IRKPDHFLDAVGASAAETIGRVIARSDAVFVDESPDALLLYGDTNTTLAVIAARRRHIPVFHLEAGNRCFDDRVPEEINR RLVDHLSDINLPLTEHARRHLLAEGLPAQRIFVTGSPMKEVLDHYAPLVDASPVLTNLGVTAGHFLVVSAHREENVDAPE LLIGLLETLNALAARYRVPIIVSTHPRTRDRLDALEASGRAPATDGLVRFCRPFGFADYIALQRAAQCVISDSGSLTEEA SLLGFPAVMIREAHERPEGVDHGVAVSCLPRPDRVLAAVDLVVDAAQGDRAPRIVPDYDVDDVSRRVVRIIVSHIDYVRR TVWFERPPVGTSEPTPGGTSLTLP >Mature_583_residues GVSHRIPAARPRPQTGHTATSPNTTGLDDGGAGGQTVPGQGARGQSIPGQGAGGPGVPGQGAGGPGVGAQGVGGQNVGGQ GAEEQNVADQGAAGESTAGWGPAERGGMTAMTGTAGTTARTGPSVPTAPSTPIAPTGPTVPTVPNRRLPPDRQGAAGRMT MPDRVPRTEIMGVPAPVPRGRPGPAEHRARVMILVGTRPEIVKLSRIIAALERAVDVCLVHSGQHYDYELNQVFFDELGI RKPDHFLDAVGASAAETIGRVIARSDAVFVDESPDALLLYGDTNTTLAVIAARRRHIPVFHLEAGNRCFDDRVPEEINRR LVDHLSDINLPLTEHARRHLLAEGLPAQRIFVTGSPMKEVLDHYAPLVDASPVLTNLGVTAGHFLVVSAHREENVDAPEL LIGLLETLNALAARYRVPIIVSTHPRTRDRLDALEASGRAPATDGLVRFCRPFGFADYIALQRAAQCVISDSGSLTEEAS LLGFPAVMIREAHERPEGVDHGVAVSCLPRPDRVLAAVDLVVDAAQGDRAPRIVPDYDVDDVSRRVVRIIVSHIDYVRRT VWFERPPVGTSEPTPGGTSLTLP
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=335, Percent_Identity=29.8507462686567, Blast_Score=93, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 61611; Mature: 61480
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSHRIPAARPRPQTGHTATSPNTTGLDDGGAGGQTVPGQGARGQSIPGQGAGGPGVPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGAGGPGVGAQGVGGQNVGGQGAEEQNVADQGAAGESTAGWGPAERGGMTAMTGTAGTTA CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC RTGPSVPTAPSTPIAPTGPTVPTVPNRRLPPDRQGAAGRMTMPDRVPRTEIMGVPAPVPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC GRPGPAEHRARVMILVGTRPEIVKLSRIIAALERAVDVCLVHSGQHYDYELNQVFFDELG CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHC IRKPDHFLDAVGASAAETIGRVIARSDAVFVDESPDALLLYGDTNTTLAVIAARRRHIPV CCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEEEEEHHHHCCCE FHLEAGNRCFDDRVPEEINRRLVDHLSDINLPLTEHARRHLLAEGLPAQRIFVTGSPMKE EEECCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH VLDHYAPLVDASPVLTNLGVTAGHFLVVSAHREENVDAPELLIGLLETLNALAARYRVPI HHHHHHCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCE IVSTHPRTRDRLDALEASGRAPATDGLVRFCRPFGFADYIALQRAAQCVISDSGSLTEEA EEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCHHH SLLGFPAVMIREAHERPEGVDHGVAVSCLPRPDRVLAAVDLVVDAAQGDRAPRIVPDYDV HHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH DDVSRRVVRIIVSHIDYVRRTVWFERPPVGTSEPTPGGTSLTLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure GVSHRIPAARPRPQTGHTATSPNTTGLDDGGAGGQTVPGQGARGQSIPGQGAGGPGVPG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QGAGGPGVGAQGVGGQNVGGQGAEEQNVADQGAAGESTAGWGPAERGGMTAMTGTAGTTA CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC RTGPSVPTAPSTPIAPTGPTVPTVPNRRLPPDRQGAAGRMTMPDRVPRTEIMGVPAPVPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC GRPGPAEHRARVMILVGTRPEIVKLSRIIAALERAVDVCLVHSGQHYDYELNQVFFDELG CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHC IRKPDHFLDAVGASAAETIGRVIARSDAVFVDESPDALLLYGDTNTTLAVIAARRRHIPV CCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCEEEEEEHHHHCCCE FHLEAGNRCFDDRVPEEINRRLVDHLSDINLPLTEHARRHLLAEGLPAQRIFVTGSPMKE EEECCCCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHH VLDHYAPLVDASPVLTNLGVTAGHFLVVSAHREENVDAPELLIGLLETLNALAARYRVPI HHHHHHCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCE IVSTHPRTRDRLDALEASGRAPATDGLVRFCRPFGFADYIALQRAAQCVISDSGSLTEEA EEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCHHH SLLGFPAVMIREAHERPEGVDHGVAVSCLPRPDRVLAAVDLVVDAAQGDRAPRIVPDYDV HHHCCHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH DDVSRRVVRIIVSHIDYVRRTVWFERPPVGTSEPTPGGTSLTLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]