Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316909

Identifier: 158316909

GI number: 158316909

Start: 6174413

End: 6175273

Strand: Reverse

Name: 158316909

Synonym: Franean1_5153

Alternate gene names: NA

Gene position: 6175273-6174413 (Counterclockwise)

Preceding gene: 158316910

Following gene: 158316908

Centisome position: 68.75

GC content: 75.15

Gene sequence:

>861_bases
ATGACGTCCGCGGGGCGGGTGACGCTGCTCGGCTACGTGCTGGGGTGGCGTCTCGTCCGGCTGCTGCCCGAGCGCGTCGC
CGCCTGGTGTTTCGCCCGCGCCGCGGATCTCGCCCACTGCCGTGGCGGGCGCGGGACGGCGCGGCTGCGCGCCAACCTGG
CCCGGGTCGTGCCGCCGGGCACCGACCTCGACGCGCTGACCCGGTCCGCGCTGCGCTCCTACGCGCGGTACTGGATGGAG
GTCTTCCGTCTCCAGGACATGCCGACCCGCCGGCTGGTCGGTGCCATGCGGGTGCTCGACGAGGACCGGCTGCGCCGCGC
GCACGCGACCGGCCGGGGCGTCATCCTGGCCCTGCCGCACATGGGGAACTGGGAGCAGGCCGGGGCGTGGCTGGTGGCCA
CCGGCATCCCGTTCACGACGGTGGCCGAGCGGCTGCGCCCCGAGGAGCTCTTCGAGCGGTTCGTCCGGTTCCGCACCGCG
CTCGGCATGGAGGTCATCCCGCTGACCGGCGGCACGCAACCGCCGTCGGACCTGCTGGCCGAGCGGCTGCGCGCCGGCGG
CGCCCTGTGCCTGCTGGCGGACCGCGACCTCAGCTCCGCCGGGGTCGCCGTCACCTTCTTCGGGGCGACGGCGACCATGC
CGCCGGGGCCGGCCGCGCTCGCGCTGCGCACAGGGGCGGTCCTGCTGCCGGTCACGCTGTGGTTCGACGACGACGGCTGG
AGCGCGCGGATCCATCCCGAGGTCGAGCACACCGACATCCCGGCCATGACCCAGCGGCTCGCGGACGAGTTCGCCTCCGG
CATCGCCGCCCATCCGTCCGACTGGCACATGCTCCAGCGGATCTGGCCCGACCGGTCATGA

Upstream 100 bases:

>100_bases
CAGCAGCCGGCCGTGCTGGCACCGCAGCCGCAGCCGCCGGTGCCCGCGGTGCCGCGGGTCGCTCCGGGCCACTGACCGCG
CGAATCGGAACCGACCGTCG

Downstream 100 bases:

>100_bases
GGAGCAGCCGGCGGTGAGAATCGGACTCGCCTGCCCCTACACCTGGGACGTGCCCGGGGGCGTCCAGGCGCACGTGCGTG
ACCTCGCCGAGACGTTGCTC

Product: lipid A biosynthesis lauroyl acyltransferase

Products: NA

Alternate protein names: PIM acyltransferase [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPGTDLDALTRSALRSYARYWME
VFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPHMGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTA
LGMEVIPLTGGTQPPSDLLAERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW
SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS

Sequences:

>Translated_286_residues
MTSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPGTDLDALTRSALRSYARYWME
VFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPHMGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTA
LGMEVIPLTGGTQPPSDLLAERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW
SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS
>Mature_285_residues
TSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPGTDLDALTRSALRSYARYWMEV
FRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPHMGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTAL
GMEVIPLTGGTQPPSDLLAERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGWS
ARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS

Specific function: Catalyzes the acylation to the position 6 of the alpha- 1,2-linked mannose residue of the phosphatidyl-myo-inositol dimannoside (PIM2) or monomannoside (PIM1) [H]

COG id: COG1560

COG function: function code M; Lauroyl/myristoyl acyltransferase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the htrB/msbB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004960 [H]

Pfam domain/function: PF03279 Lip_A_acyltrans [H]

EC number: NA

Molecular weight: Translated: 31521; Mature: 31390

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
TDLDALTRSALRSYARYWMEVFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
MGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTALGMEVIPLTGGTQPPSDLLA
CCCHHHCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH
ERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW
HHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCC
SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS
CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
TSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
TDLDALTRSALRSYARYWMEVFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPH
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
MGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTALGMEVIPLTGGTQPPSDLLA
CCCHHHCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH
ERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW
HHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCC
SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS
CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA