| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316909
Identifier: 158316909
GI number: 158316909
Start: 6174413
End: 6175273
Strand: Reverse
Name: 158316909
Synonym: Franean1_5153
Alternate gene names: NA
Gene position: 6175273-6174413 (Counterclockwise)
Preceding gene: 158316910
Following gene: 158316908
Centisome position: 68.75
GC content: 75.15
Gene sequence:
>861_bases ATGACGTCCGCGGGGCGGGTGACGCTGCTCGGCTACGTGCTGGGGTGGCGTCTCGTCCGGCTGCTGCCCGAGCGCGTCGC CGCCTGGTGTTTCGCCCGCGCCGCGGATCTCGCCCACTGCCGTGGCGGGCGCGGGACGGCGCGGCTGCGCGCCAACCTGG CCCGGGTCGTGCCGCCGGGCACCGACCTCGACGCGCTGACCCGGTCCGCGCTGCGCTCCTACGCGCGGTACTGGATGGAG GTCTTCCGTCTCCAGGACATGCCGACCCGCCGGCTGGTCGGTGCCATGCGGGTGCTCGACGAGGACCGGCTGCGCCGCGC GCACGCGACCGGCCGGGGCGTCATCCTGGCCCTGCCGCACATGGGGAACTGGGAGCAGGCCGGGGCGTGGCTGGTGGCCA CCGGCATCCCGTTCACGACGGTGGCCGAGCGGCTGCGCCCCGAGGAGCTCTTCGAGCGGTTCGTCCGGTTCCGCACCGCG CTCGGCATGGAGGTCATCCCGCTGACCGGCGGCACGCAACCGCCGTCGGACCTGCTGGCCGAGCGGCTGCGCGCCGGCGG CGCCCTGTGCCTGCTGGCGGACCGCGACCTCAGCTCCGCCGGGGTCGCCGTCACCTTCTTCGGGGCGACGGCGACCATGC CGCCGGGGCCGGCCGCGCTCGCGCTGCGCACAGGGGCGGTCCTGCTGCCGGTCACGCTGTGGTTCGACGACGACGGCTGG AGCGCGCGGATCCATCCCGAGGTCGAGCACACCGACATCCCGGCCATGACCCAGCGGCTCGCGGACGAGTTCGCCTCCGG CATCGCCGCCCATCCGTCCGACTGGCACATGCTCCAGCGGATCTGGCCCGACCGGTCATGA
Upstream 100 bases:
>100_bases CAGCAGCCGGCCGTGCTGGCACCGCAGCCGCAGCCGCCGGTGCCCGCGGTGCCGCGGGTCGCTCCGGGCCACTGACCGCG CGAATCGGAACCGACCGTCG
Downstream 100 bases:
>100_bases GGAGCAGCCGGCGGTGAGAATCGGACTCGCCTGCCCCTACACCTGGGACGTGCCCGGGGGCGTCCAGGCGCACGTGCGTG ACCTCGCCGAGACGTTGCTC
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: PIM acyltransferase [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPGTDLDALTRSALRSYARYWME VFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPHMGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTA LGMEVIPLTGGTQPPSDLLAERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS
Sequences:
>Translated_286_residues MTSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPGTDLDALTRSALRSYARYWME VFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPHMGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTA LGMEVIPLTGGTQPPSDLLAERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS >Mature_285_residues TSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPGTDLDALTRSALRSYARYWMEV FRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPHMGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTAL GMEVIPLTGGTQPPSDLLAERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGWS ARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS
Specific function: Catalyzes the acylation to the position 6 of the alpha- 1,2-linked mannose residue of the phosphatidyl-myo-inositol dimannoside (PIM2) or monomannoside (PIM1) [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: NA
Molecular weight: Translated: 31521; Mature: 31390
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC TDLDALTRSALRSYARYWMEVFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPH CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC MGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTALGMEVIPLTGGTQPPSDLLA CCCHHHCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH ERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW HHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCC SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure TSAGRVTLLGYVLGWRLVRLLPERVAAWCFARAADLAHCRGGRGTARLRANLARVVPPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC TDLDALTRSALRSYARYWMEVFRLQDMPTRRLVGAMRVLDEDRLRRAHATGRGVILALPH CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC MGNWEQAGAWLVATGIPFTTVAERLRPEELFERFVRFRTALGMEVIPLTGGTQPPSDLLA CCCHHHCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH ERLRAGGALCLLADRDLSSAGVAVTFFGATATMPPGPAALALRTGAVLLPVTLWFDDDGW HHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCC SARIHPEVEHTDIPAMTQRLADEFASGIAAHPSDWHMLQRIWPDRS CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA