| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is apt
Identifier: 158316896
GI number: 158316896
Start: 6161377
End: 6161931
Strand: Reverse
Name: apt
Synonym: Franean1_5140
Alternate gene names: 158316896
Gene position: 6161931-6161377 (Counterclockwise)
Preceding gene: 158316897
Following gene: 158316895
Centisome position: 68.6
GC content: 72.61
Gene sequence:
>555_bases ATGACAAGCGTCGACAGCCAGCCGGACCTGAGCGCGGCCGAGGCCGTGCTGGGCGCCCACGTGCGCGACGTCATGGACTT CCCCAAGCCGGGAGTCGTCTTCAAGGACATCACCCCGCTGCTCTCGACTCCGGCCGCCTTCGGAGTGGTCGTCGGTGCGC TGGCGGACCTCGCCCGCGGGCTGGGCGCCACCACGATCGCCGGCATCGAGGCGCGTGGCTTCCTGCTGGCCGCCCCGGTC GCCGACCGGGTCGGCGCCGGCATCGTCCCGATCCGCAAGCAGGGCAAGCTGCCCGGCCGGACCCGCAGCGAGGCGTACGC GCTGGAGTACGGGACGGCCGTCCTGGAGATCCATGAGGACGCCGTCCCGACGGGTGAGCGGGTCCTGATCGTCGACGACG TGCTCGCTACCGGCGGCACCGCGGCGGCCGCGCACACCCTGCTGCGCGGGTGCGGCGCCGACGTGGTGGGGCTGGCGGTG CTGATGGAGCTGACCTTCCTCTCCGGGCGCGACCGGACCGGCACGCTCGACGTCACCTCGATCATGAAGATCTGA
Upstream 100 bases:
>100_bases CAGAGGCAGAACCACGATCGACAGAACCACGACCGGCACGACATCGGCGCGAACCGCCGCCCGCGGGGCGGCGACAACGA AGATCGGAGAGGTCACCACG
Downstream 100 bases:
>100_bases CCGTGTCCGGTGCGTCGCCCGTGTCCGGTCACGGTTCGTGACCGGCGCTCGGCATTGACGCGACCGGCCTGCCCGCCGGC CTCCGGCGCGCCCCTGGCCG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTSVDSQPDLSAAEAVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPV ADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAV LMELTFLSGRDRTGTLDVTSIMKI
Sequences:
>Translated_184_residues MTSVDSQPDLSAAEAVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPV ADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAV LMELTFLSGRDRTGTLDVTSIMKI >Mature_183_residues TSVDSQPDLSAAEAVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARGLGATTIAGIEARGFLLAAPVA DRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHEDAVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVL MELTFLSGRDRTGTLDVTSIMKI
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=170, Percent_Identity=47.0588235294118, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI71773201, Length=125, Percent_Identity=51.2, Blast_Score=118, Evalue=2e-27, Organism=Escherichia coli, GI1786675, Length=164, Percent_Identity=46.3414634146341, Blast_Score=149, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17509087, Length=177, Percent_Identity=40.1129943502825, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6323619, Length=167, Percent_Identity=38.3233532934132, Blast_Score=106, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320649, Length=156, Percent_Identity=37.8205128205128, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI17136334, Length=169, Percent_Identity=39.0532544378698, Blast_Score=110, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_FRASN (A8KZE2)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001509404.1 - ProteinModelPortal: A8KZE2 - GeneID: 5673474 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_5140 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - BioCyc: FSP1855:FRANEAN1_5140-MONOMER - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 18858; Mature: 18727
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVDSQPDLSAAEAVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHC LGATTIAGIEARGFLLAAPVADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHED CCCHHEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHCCEEEEEECC AVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVLMELTFLSGRDRTGTLDVTS CCCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH IMKI HHCC >Mature Secondary Structure TSVDSQPDLSAAEAVLGAHVRDVMDFPKPGVVFKDITPLLSTPAAFGVVVGALADLARG CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHC LGATTIAGIEARGFLLAAPVADRVGAGIVPIRKQGKLPGRTRSEAYALEYGTAVLEIHED CCCHHEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHCCEEEEEECC AVPTGERVLIVDDVLATGGTAAAAHTLLRGCGADVVGLAVLMELTFLSGRDRTGTLDVTS CCCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHH IMKI HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA