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The map label for this gene is crtB [H]

Identifier: 158316888

GI number: 158316888

Start: 6147949

End: 6148929

Strand: Direct

Name: crtB [H]

Synonym: Franean1_5132

Alternate gene names: 158316888

Gene position: 6147949-6148929 (Clockwise)

Preceding gene: 158316887

Following gene: 158316890

Centisome position: 68.45

GC content: 71.56

Gene sequence:

>981_bases
GTGAGCGGCCTGCGCAGCGAGCTGGATGCGGCCGGCATCACCGATCCGCGCCTGCGGAGCTCCTACCGCGCCGCCCGCGA
GCTGAACGCCGTCCACGGGCGCACCTACTACCTGGCGACCCTCCTGCTGCCACGGTGGAAGCGCCCGCACGTCCACGCCC
TGTACGGCTTCGCGCGGTACGCCGACGAGATCGTGGACGACCTCGACTCGACGCTGACCGACGAGGCGAAGGCACAGTGG
CTGCGACAGTGGGGCAACCGCTTCCTCACCGCACTCGCCACCGGCTCGGACGAGGCCGGGGCCGGGGCCGACAGGAGCGG
GGCAGGCTCCGTCGGTGCCGGGGATGCCGGGGTGCTGCCAGCCGTCCTGCACACGATTCGGCGTTTCGACCTGCCGGTCG
CGTACTTCGAGGCCTTCCTGACCTCGATGGCGATGGACCTGACCGTCACCGGCTACGCCACCTGGGACGACCTCATGGTC
TATGTCCACGGCTCGGCGGTGGTGATCGGCCTGCAGATGCTGCCCATCCTCGAGCCCGTCGACGCCTCGGCGGAACCGTA
CGCCCGCGACCTCGGCGCCGCCTTCCAACTCGCGAACTTCCTCCGCGACGTCGGGGAGGACCTGCGCCGCGGCCGCGTCT
ACCTTCCGCAGGCGTCCCTGGACCTGTTCGGAGTCACCAGGGAGCGCCTCGCCACCGGGGTGGTCGACGGCCCCGTCCGC
CGGCTGCTGACCCACGAGATCGCCCGTGCGCGGGAGCTGTTCCGCTCGGCCCGACCGGGCATCCGGCTGCTGCACCCGAC
GTCCCGCGACTGTGTCTGGACCGCGTTCCACCTCTACGGCGACATCCTGGACGAGATCGAACGCGCCGACTACCAGATCC
TCGACCGACGGGTATCCGTCGGCCTGGGCCGCCGCCTCACCGTCGCGACCCCGGCCCTGATCCGCGCCACCCGCTCCCGC
CGCCATCCCTCGACGAACTAA

Upstream 100 bases:

>100_bases
GCTGCCCTGATCCGCCGGCAACGCTGATCCGCCGGGTGCCCTGATCCGCCGCCTGCCCTGATCTGCCGGTTGTGCTGATC
CGCCGGCTACGCTGGCTGTC

Downstream 100 bases:

>100_bases
GCCGCCCCACCAGCCCCCACATCACGGCTCAGAGCGGGTCGTGACTCAGAGCAGGTCGCGGCCGCCGAGGTAGGGGCGCA
GCACCTCGGGCACCCTGACC

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSGLRSELDAAGITDPRLRSSYRAARELNAVHGRTYYLATLLLPRWKRPHVHALYGFARYADEIVDDLDSTLTDEAKAQW
LRQWGNRFLTALATGSDEAGAGADRSGAGSVGAGDAGVLPAVLHTIRRFDLPVAYFEAFLTSMAMDLTVTGYATWDDLMV
YVHGSAVVIGLQMLPILEPVDASAEPYARDLGAAFQLANFLRDVGEDLRRGRVYLPQASLDLFGVTRERLATGVVDGPVR
RLLTHEIARARELFRSARPGIRLLHPTSRDCVWTAFHLYGDILDEIERADYQILDRRVSVGLGRRLTVATPALIRATRSR
RHPSTN

Sequences:

>Translated_326_residues
MSGLRSELDAAGITDPRLRSSYRAARELNAVHGRTYYLATLLLPRWKRPHVHALYGFARYADEIVDDLDSTLTDEAKAQW
LRQWGNRFLTALATGSDEAGAGADRSGAGSVGAGDAGVLPAVLHTIRRFDLPVAYFEAFLTSMAMDLTVTGYATWDDLMV
YVHGSAVVIGLQMLPILEPVDASAEPYARDLGAAFQLANFLRDVGEDLRRGRVYLPQASLDLFGVTRERLATGVVDGPVR
RLLTHEIARARELFRSARPGIRLLHPTSRDCVWTAFHLYGDILDEIERADYQILDRRVSVGLGRRLTVATPALIRATRSR
RHPSTN
>Mature_325_residues
SGLRSELDAAGITDPRLRSSYRAARELNAVHGRTYYLATLLLPRWKRPHVHALYGFARYADEIVDDLDSTLTDEAKAQWL
RQWGNRFLTALATGSDEAGAGADRSGAGSVGAGDAGVLPAVLHTIRRFDLPVAYFEAFLTSMAMDLTVTGYATWDDLMVY
VHGSAVVIGLQMLPILEPVDASAEPYARDLGAAFQLANFLRDVGEDLRRGRVYLPQASLDLFGVTRERLATGVVDGPVRR
LLTHEIARARELFRSARPGIRLLHPTSRDCVWTAFHLYGDILDEIERADYQILDRRVSVGLGRRLTVATPALIRATRSRR
HPSTN

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 36113; Mature: 35981

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLRSELDAAGITDPRLRSSYRAARELNAVHGRTYYLATLLLPRWKRPHVHALYGFARY
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ADEIVDDLDSTLTDEAKAQWLRQWGNRFLTALATGSDEAGAGADRSGAGSVGAGDAGVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
AVLHTIRRFDLPVAYFEAFLTSMAMDLTVTGYATWDDLMVYVHGSAVVIGLQMLPILEPV
HHHHHHHHHCCCHHHHHHHHHHHHHHHEEECEECHHHEEEEECCCHHHHHHHHHHHCCCC
DASAEPYARDLGAAFQLANFLRDVGEDLRRGRVYLPQASLDLFGVTRERLATGVVDGPVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
RLLTHEIARARELFRSARPGIRLLHPTSRDCVWTAFHLYGDILDEIERADYQILDRRVSV
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGRRLTVATPALIRATRSRRHPSTN
CCCCEEEHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGLRSELDAAGITDPRLRSSYRAARELNAVHGRTYYLATLLLPRWKRPHVHALYGFARY
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ADEIVDDLDSTLTDEAKAQWLRQWGNRFLTALATGSDEAGAGADRSGAGSVGAGDAGVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
AVLHTIRRFDLPVAYFEAFLTSMAMDLTVTGYATWDDLMVYVHGSAVVIGLQMLPILEPV
HHHHHHHHHCCCHHHHHHHHHHHHHHHEEECEECHHHEEEEECCCHHHHHHHHHHHCCCC
DASAEPYARDLGAAFQLANFLRDVGEDLRRGRVYLPQASLDLFGVTRERLATGVVDGPVR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
RLLTHEIARARELFRSARPGIRLLHPTSRDCVWTAFHLYGDILDEIERADYQILDRRVSV
HHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGRRLTVATPALIRATRSRRHPSTN
CCCCEEEHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]