Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316886

Identifier: 158316886

GI number: 158316886

Start: 6145802

End: 6146902

Strand: Direct

Name: 158316886

Synonym: Franean1_5130

Alternate gene names: NA

Gene position: 6145802-6146902 (Clockwise)

Preceding gene: 158316885

Following gene: 158316887

Centisome position: 68.42

GC content: 76.84

Gene sequence:

>1101_bases
GTGACGGCTCCCCGCGCGGATCCGGCCGCGCCCCAGCCCGCGGCGACGTCGCCGTCGGTCGAGCGGACGCTGCGCAGCCT
CGAACTCACCGTGACCCGCCGGCTGGACGGCATGCTGCTCGGCGATCATCTCGGCCTGCTGCCCGGCCAGGGCACCGAGA
AGGCCGAGAGCCGGGAGTACAACGTCGGCGACGACGTCCGCCGGATGGACTGGGCGGTCACCGCGCGGACGACCGTCCCG
CACGTGCACGACCTGATCGCCGACCGGGAGCTGGAGACGTGGGCGCTGGTCGACCTGACGGCCAGCCAGGAGTTCGGCAC
CGCCTCGGTCCGCAAGCGCGATCTGGCGATCGCCGCGGTGGCGGCGATCGGCTTCCTCACCGCCCGCACGGGCAACCGGA
TGGGAGCCGTGGCCCTCACCCCGGCCGGGCCACGGGTCATCCCCGCCCGGCCCGGCCGCCAGGGCCTGCGAACGCTGCTG
CGGACCCTGCTGACGGTCCCCGAGGGGGCGCACGACCGGCCGCTGCGCCGGCCCGACCCGGCGGCCGCCACCGATCTCGC
CGCCGCAATCGCCGCCCTGGACCGCCCGCGCCGGCGCCGTGGCCTCGCGGTGGTCGTCAGCGACTTCCTCTCCACCGACC
TCGGCTGGGAACGGCCGATGCGCGTCCTCGCGGCGCGCCACCAGCTCCTCGCGGTCGAGGTCCTCGACCCGGCCGAGCTG
ACGCTGCCCGCCGTGGGCCTGCTTCCGGTCGTGGACGCGGAGACCGGCGAGCTGGTGGAGGTTCCGACGTCCTCACGGCG
ACTGCGTGAGCGCTACCGCCTGGCCGCGGCCGAGCACCGCTCCCAGGTCGCCCTCGCGCTGCGCCGGGCGGGCGCCGGGC
ACCTGGTGCTGCGCACCGACTCCGACTGGCTGATCGACATCGTCCGCTTCGTCTCGGCGAGCCGGACGAGCCGCGGCGCG
GCACGACGCCCACCCGTGGACTCGACCCGGCTACCGGGCCACCCGCGATCGCTCCCGCCGGCCACCGGCCGGGGTCGACC
CGGGACAGCAGCTGTGGTCGGGGCAGGCGGCCGTCGAGGCAGGCGGGCGGCGGCGCCGTGA

Upstream 100 bases:

>100_bases
GGCGCAACGGGCGCATCCCCCCACCGGTCACGCACTCCGGGCGCTGGCGCACCGACCCACGCACCGGCTTCCCCGAGTAC
TTCGATGGCGGGTCGTCCCG

Downstream 100 bases:

>100_bases
GCTTCCTGGCCGGTCACTGGTTGTGGCTCTTCCTCGCCGTCGGCGCGCTGACGGCGGCTTACGTCGTGGTGTCGCTGCGC
CGCCGGGTCTACGCCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTAPRADPAAPQPAATSPSVERTLRSLELTVTRRLDGMLLGDHLGLLPGQGTEKAESREYNVGDDVRRMDWAVTARTTVP
HVHDLIADRELETWALVDLTASQEFGTASVRKRDLAIAAVAAIGFLTARTGNRMGAVALTPAGPRVIPARPGRQGLRTLL
RTLLTVPEGAHDRPLRRPDPAAATDLAAAIAALDRPRRRRGLAVVVSDFLSTDLGWERPMRVLAARHQLLAVEVLDPAEL
TLPAVGLLPVVDAETGELVEVPTSSRRLRERYRLAAAEHRSQVALALRRAGAGHLVLRTDSDWLIDIVRFVSASRTSRGA
ARRPPVDSTRLPGHPRSLPPATGRGRPGTAAVVGAGGRRGRRAAAP

Sequences:

>Translated_366_residues
MTAPRADPAAPQPAATSPSVERTLRSLELTVTRRLDGMLLGDHLGLLPGQGTEKAESREYNVGDDVRRMDWAVTARTTVP
HVHDLIADRELETWALVDLTASQEFGTASVRKRDLAIAAVAAIGFLTARTGNRMGAVALTPAGPRVIPARPGRQGLRTLL
RTLLTVPEGAHDRPLRRPDPAAATDLAAAIAALDRPRRRRGLAVVVSDFLSTDLGWERPMRVLAARHQLLAVEVLDPAEL
TLPAVGLLPVVDAETGELVEVPTSSRRLRERYRLAAAEHRSQVALALRRAGAGHLVLRTDSDWLIDIVRFVSASRTSRGA
ARRPPVDSTRLPGHPRSLPPATGRGRPGTAAVVGAGGRRGRRAAAP
>Mature_365_residues
TAPRADPAAPQPAATSPSVERTLRSLELTVTRRLDGMLLGDHLGLLPGQGTEKAESREYNVGDDVRRMDWAVTARTTVPH
VHDLIADRELETWALVDLTASQEFGTASVRKRDLAIAAVAAIGFLTARTGNRMGAVALTPAGPRVIPARPGRQGLRTLLR
TLLTVPEGAHDRPLRRPDPAAATDLAAAIAALDRPRRRRGLAVVVSDFLSTDLGWERPMRVLAARHQLLAVEVLDPAELT
LPAVGLLPVVDAETGELVEVPTSSRRLRERYRLAAAEHRSQVALALRRAGAGHLVLRTDSDWLIDIVRFVSASRTSRGAA
RRPPVDSTRLPGHPRSLPPATGRGRPGTAAVVGAGGRRGRRAAAP

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 39254; Mature: 39122

Theoretical pI: Translated: 11.89; Mature: 11.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPRADPAAPQPAATSPSVERTLRSLELTVTRRLDGMLLGDHLGLLPGQGTEKAESREY
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHCCCC
NVGDDVRRMDWAVTARTTVPHVHDLIADRELETWALVDLTASQEFGTASVRKRDLAIAAV
CCCCHHHHHHHEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
AAIGFLTARTGNRMGAVALTPAGPRVIPARPGRQGLRTLLRTLLTVPEGAHDRPLRRPDP
HHHHHHHHCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AAATDLAAAIAALDRPRRRRGLAVVVSDFLSTDLGWERPMRVLAARHQLLAVEVLDPAEL
HHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCCHH
TLPAVGLLPVVDAETGELVEVPTSSRRLRERYRLAAAEHRSQVALALRRAGAGHLVLRTD
CCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
SDWLIDIVRFVSASRTSRGAARRPPVDSTRLPGHPRSLPPATGRGRPGTAAVVGAGGRRG
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RRAAAP
CCCCCC
>Mature Secondary Structure 
TAPRADPAAPQPAATSPSVERTLRSLELTVTRRLDGMLLGDHLGLLPGQGTEKAESREY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHCCCC
NVGDDVRRMDWAVTARTTVPHVHDLIADRELETWALVDLTASQEFGTASVRKRDLAIAAV
CCCCHHHHHHHEEEECCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHH
AAIGFLTARTGNRMGAVALTPAGPRVIPARPGRQGLRTLLRTLLTVPEGAHDRPLRRPDP
HHHHHHHHCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AAATDLAAAIAALDRPRRRRGLAVVVSDFLSTDLGWERPMRVLAARHQLLAVEVLDPAEL
HHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCCHH
TLPAVGLLPVVDAETGELVEVPTSSRRLRERYRLAAAEHRSQVALALRRAGAGHLVLRTD
CCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
SDWLIDIVRFVSASRTSRGAARRPPVDSTRLPGHPRSLPPATGRGRPGTAAVVGAGGRRG
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
RRAAAP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]