| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yeaC [H]
Identifier: 158316885
GI number: 158316885
Start: 6144603
End: 6145805
Strand: Direct
Name: yeaC [H]
Synonym: Franean1_5129
Alternate gene names: 158316885
Gene position: 6144603-6145805 (Clockwise)
Preceding gene: 158316884
Following gene: 158316886
Centisome position: 68.41
GC content: 72.73
Gene sequence:
>1203_bases ATGAACGAGTGGACGACCGATCCCGGCGTGGCGGCACCCGGCGCGGAGGTCCGGGCGCCCGCCGGCGCGGGTTCGGCGGC CAGCCGTCCGGCCGAGCCCTCCGCGATCGAGGCGGCCGACGACGCGGCCCTGCTCGAGCGGGCGTTGTTCGAGGTCAAGA AGGTCATCGTCGGCCAGGATCACATGGTCGAGCGCATGCTCGTCGCGCTGCTGGCCCGGGGGCACTGCCTGTTGGAGGGC GTGCCCGGCGTCGCCAAGACGCTGGCCGTGCAGACGCTGGCGACGGTCGTCGGCGGCTCCTTCGTGCGGATCCAGTTCAC CAGCGACCTCGTCCCCTCGGACATCATCGGAACGAGGATCTTCCGCAGCAGCCGGGAGACATTCGACATCGAACTCGGTC CGGTCTTCGCGAACTTCGTTCTCGCGGACGAGATCAACCGCGCGCCCGCGAAGGTGCAGTCGGCGCTGCTCGAGGTGATG TCGGAACGGCAGGTATCCCTCGGCGGGGTCACTCACCCGCTGCCGCGGCCCTTCCTTGTGCTGGCGACGCAGAACCCGAT CGAGTCGGAGGGCGTCTACCCGCTACCCGAGGCGCAGCGCGACCGCTTCCTGATGAAGGTCAACGTTCCGTACCCGACCG CGGCCGAGGAGCTGGAGATCGTCCGGCGGATGGGTGTGCGGCCGCCCACCGCCGAGGGCGTCCTCGAGCCGGAGTCCCTC ATCAGGCTGCAGAACCGCGCGGACGACGTGTTCGTCCACCACGCGATCACCGAGTACGCCGTCCGCCTGGTGCTCGCGAC CCGCTCCCCCGCCGACGTCGGCCTCCCCGAGCTGGCCGGGCACCTCGCGTACGGAGCGTCCCCCCGGGCCTCGCTCGGCC TCATCGCCGCGGCCCGGGCGCTCGCCCTGCTGCGCGGCCGGGATTACGTGGTCCCCGACGACGTGTCCGCGGTCGCGCTC GACGTCCTGCCGCACCGCCTGGTCCTCTCCTACGAGGCGCTGGCCGAGGGGCTCACCGCCGAGGAGATCGCCGGCCGCGT CCTCGACGCGCTGCCGCACCCCCAGGTCGCGCCCCGCCAGCAGGCCGGCGCCGACCACGGGCGCAACGGGCGCATCCCCC CACCGGTCACGCACTCCGGGCGCTGGCGCACCGACCCACGCACCGGCTTCCCCGAGTACTTCGATGGCGGGTCGTCCCGG TGA
Upstream 100 bases:
>100_bases GGTGAGAACTTCCTGAAGGGCACCTTAGAAGAGGCTTCCGGCCACACTGTCCCGAGTCCGTTGGCACTCGATTCCGCACA GCGTCTGGGAGGATGGCGCC
Downstream 100 bases:
>100_bases CGGCTCCCCGCGCGGATCCGGCCGCGCCCCAGCCCGCGGCGACGTCGCCGTCGGTCGAGCGGACGCTGCGCAGCCTCGAA CTCACCGTGACCCGCCGGCT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MNEWTTDPGVAAPGAEVRAPAGAGSAASRPAEPSAIEAADDAALLERALFEVKKVIVGQDHMVERMLVALLARGHCLLEG VPGVAKTLAVQTLATVVGGSFVRIQFTSDLVPSDIIGTRIFRSSRETFDIELGPVFANFVLADEINRAPAKVQSALLEVM SERQVSLGGVTHPLPRPFLVLATQNPIESEGVYPLPEAQRDRFLMKVNVPYPTAAEELEIVRRMGVRPPTAEGVLEPESL IRLQNRADDVFVHHAITEYAVRLVLATRSPADVGLPELAGHLAYGASPRASLGLIAAARALALLRGRDYVVPDDVSAVAL DVLPHRLVLSYEALAEGLTAEEIAGRVLDALPHPQVAPRQQAGADHGRNGRIPPPVTHSGRWRTDPRTGFPEYFDGGSSR
Sequences:
>Translated_400_residues MNEWTTDPGVAAPGAEVRAPAGAGSAASRPAEPSAIEAADDAALLERALFEVKKVIVGQDHMVERMLVALLARGHCLLEG VPGVAKTLAVQTLATVVGGSFVRIQFTSDLVPSDIIGTRIFRSSRETFDIELGPVFANFVLADEINRAPAKVQSALLEVM SERQVSLGGVTHPLPRPFLVLATQNPIESEGVYPLPEAQRDRFLMKVNVPYPTAAEELEIVRRMGVRPPTAEGVLEPESL IRLQNRADDVFVHHAITEYAVRLVLATRSPADVGLPELAGHLAYGASPRASLGLIAAARALALLRGRDYVVPDDVSAVAL DVLPHRLVLSYEALAEGLTAEEIAGRVLDALPHPQVAPRQQAGADHGRNGRIPPPVTHSGRWRTDPRTGFPEYFDGGSSR >Mature_400_residues MNEWTTDPGVAAPGAEVRAPAGAGSAASRPAEPSAIEAADDAALLERALFEVKKVIVGQDHMVERMLVALLARGHCLLEG VPGVAKTLAVQTLATVVGGSFVRIQFTSDLVPSDIIGTRIFRSSRETFDIELGPVFANFVLADEINRAPAKVQSALLEVM SERQVSLGGVTHPLPRPFLVLATQNPIESEGVYPLPEAQRDRFLMKVNVPYPTAAEELEIVRRMGVRPPTAEGVLEPESL IRLQNRADDVFVHHAITEYAVRLVLATRSPADVGLPELAGHLAYGASPRASLGLIAAARALALLRGRDYVVPDDVSAVAL DVLPHRLVLSYEALAEGLTAEEIAGRVLDALPHPQVAPRQQAGADHGRNGRIPPPVTHSGRWRTDPRTGFPEYFDGGSSR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 42854; Mature: 42854
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEWTTDPGVAAPGAEVRAPAGAGSAASRPAEPSAIEAADDAALLERALFEVKKVIVGQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCH HMVERMLVALLARGHCLLEGVPGVAKTLAVQTLATVVGGSFVRIQFTSDLVPSDIIGTRI HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH FRSSRETFDIELGPVFANFVLADEINRAPAKVQSALLEVMSERQVSLGGVTHPLPRPFLV HHCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEE LATQNPIESEGVYPLPEAQRDRFLMKVNVPYPTAAEELEIVRRMGVRPPTAEGVLEPESL EEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH IRLQNRADDVFVHHAITEYAVRLVLATRSPADVGLPELAGHLAYGASPRASLGLIAAARA HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH LALLRGRDYVVPDDVSAVALDVLPHRLVLSYEALAEGLTAEEIAGRVLDALPHPQVAPRQ HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH QAGADHGRNGRIPPPVTHSGRWRTDPRTGFPEYFDGGSSR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MNEWTTDPGVAAPGAEVRAPAGAGSAASRPAEPSAIEAADDAALLERALFEVKKVIVGQD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCH HMVERMLVALLARGHCLLEGVPGVAKTLAVQTLATVVGGSFVRIQFTSDLVPSDIIGTRI HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHH FRSSRETFDIELGPVFANFVLADEINRAPAKVQSALLEVMSERQVSLGGVTHPLPRPFLV HHCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEE LATQNPIESEGVYPLPEAQRDRFLMKVNVPYPTAAEELEIVRRMGVRPPTAEGVLEPESL EEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH IRLQNRADDVFVHHAITEYAVRLVLATRSPADVGLPELAGHLAYGASPRASLGLIAAARA HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH LALLRGRDYVVPDDVSAVALDVLPHRLVLSYEALAEGLTAEEIAGRVLDALPHPQVAPRQ HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH QAGADHGRNGRIPPPVTHSGRWRTDPRTGFPEYFDGGSSR HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]