| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316881
Identifier: 158316881
GI number: 158316881
Start: 6139825
End: 6140592
Strand: Reverse
Name: 158316881
Synonym: Franean1_5125
Alternate gene names: NA
Gene position: 6140592-6139825 (Counterclockwise)
Preceding gene: 158316882
Following gene: 158316873
Centisome position: 68.37
GC content: 73.44
Gene sequence:
>768_bases ATGGACTCGACGACACCGGTCGGCTGGTCGGATACCACGACGGAACTCTACGGCGCGGGCACGATGGACGGTGTGCGCAC CCCGATACCCGATCGAGACACCTACCTGGTCGAATGGGCCGCGCTACACGGCGGGTACGACCCCCGAAGTGGCGCGCGCA TGATCCGGATCTGGCTCGATCTGGTGTATCGCCTGGCCAGGCCGCTGGCCGCGGCCGGCGTTAGTCCGGGCGCGGTGACG GCGGCGACGATCGCCGCGACCACGCCGGTGATTCCCGCCGCATGGGCGGGAGGCCGTTGGGTGCTGGTCTGCCCACTCGT CGTCGTGGCCGGCGGCCTGCTGGACAATCTCGACGGCGCGGTCGCCGTGCTGCGCGCCCGGGTGACGAGCTGGGGCTACG TGCTCGACTCGGCCGCCGACCGGGTCTGCGACGCCTGCCACCTGCTCGCGCTCTGGCTGGTCGGGGCACCGGTCGCGCTG GTCGTGTCGGCGGGCGGCGCGATGATGATGCTCGAGTACGTGCGGGCCCGCGCGGCCGGTGCCGGGCACGGTGAGATCGG CACCGTGACGGTGGGGGAGCGGCCGACCAGGATCATTCTCGCGGCGGTGGGTCTCGCGCTGGCCGGGGCCGTCCCAGCAC ATGCGGCCGCGGTGGTCACGGTCGCCGCGGCGGCCACGCTGGTGGTGTGCGTCGTCGGGCTCGTCCAGTACCTCGTCTCG GTGCGGTCGGCGCTGTCGGCGGGCGGCGGGGTCAGGCCGGGCCGATGA
Upstream 100 bases:
>100_bases CAGACCGAGATCGAGAGCGTTGAAGACCGGGGTGATGCGCACGGCCAGTATCACCTGGTCACGGTGCGCGCTGAAAACGT GATCGGGGTCCAGGTCCTCG
Downstream 100 bases:
>100_bases GATCGGCGACGATCTTCGCGGAGAGCGTGACCAGCGGCAGCCCGCCGCCCGGATGGGCCGAGCCGCCGACCAGGAACAAC CCGGGTACCGGCGAGCGGTT
Product: CDP-alcohol phosphatidyltransferase
Products: NA
Alternate protein names: CDP-Diacylglycerol-Inositol 3-Phosphatidyltransferase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MDSTTPVGWSDTTTELYGAGTMDGVRTPIPDRDTYLVEWAALHGGYDPRSGARMIRIWLDLVYRLARPLAAAGVSPGAVT AATIAATTPVIPAAWAGGRWVLVCPLVVVAGGLLDNLDGAVAVLRARVTSWGYVLDSAADRVCDACHLLALWLVGAPVAL VVSAGGAMMMLEYVRARAAGAGHGEIGTVTVGERPTRIILAAVGLALAGAVPAHAAAVVTVAAAATLVVCVVGLVQYLVS VRSALSAGGGVRPGR
Sequences:
>Translated_255_residues MDSTTPVGWSDTTTELYGAGTMDGVRTPIPDRDTYLVEWAALHGGYDPRSGARMIRIWLDLVYRLARPLAAAGVSPGAVT AATIAATTPVIPAAWAGGRWVLVCPLVVVAGGLLDNLDGAVAVLRARVTSWGYVLDSAADRVCDACHLLALWLVGAPVAL VVSAGGAMMMLEYVRARAAGAGHGEIGTVTVGERPTRIILAAVGLALAGAVPAHAAAVVTVAAAATLVVCVVGLVQYLVS VRSALSAGGGVRPGR >Mature_255_residues MDSTTPVGWSDTTTELYGAGTMDGVRTPIPDRDTYLVEWAALHGGYDPRSGARMIRIWLDLVYRLARPLAAAGVSPGAVT AATIAATTPVIPAAWAGGRWVLVCPLVVVAGGLLDNLDGAVAVLRARVTSWGYVLDSAADRVCDACHLLALWLVGAPVAL VVSAGGAMMMLEYVRARAAGAGHGEIGTVTVGERPTRIILAAVGLALAGAVPAHAAAVVTVAAAATLVVCVVGLVQYLVS VRSALSAGGGVRPGR
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25926; Mature: 25926
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSTTPVGWSDTTTELYGAGTMDGVRTPIPDRDTYLVEWAALHGGYDPRSGARMIRIWLD CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHH LVYRLARPLAAAGVSPGAVTAATIAATTPVIPAAWAGGRWVLVCPLVVVAGGLLDNLDGA HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCHHH VAVLRARVTSWGYVLDSAADRVCDACHLLALWLVGAPVALVVSAGGAMMMLEYVRARAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCC AGHGEIGTVTVGERPTRIILAAVGLALAGAVPAHAAAVVTVAAAATLVVCVVGLVQYLVS CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRSALSAGGGVRPGR HHHHHHCCCCCCCCC >Mature Secondary Structure MDSTTPVGWSDTTTELYGAGTMDGVRTPIPDRDTYLVEWAALHGGYDPRSGARMIRIWLD CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCHHHHHHHHHH LVYRLARPLAAAGVSPGAVTAATIAATTPVIPAAWAGGRWVLVCPLVVVAGGLLDNLDGA HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCHHH VAVLRARVTSWGYVLDSAADRVCDACHLLALWLVGAPVALVVSAGGAMMMLEYVRARAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHCC AGHGEIGTVTVGERPTRIILAAVGLALAGAVPAHAAAVVTVAAAATLVVCVVGLVQYLVS CCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRSALSAGGGVRPGR HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA