Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316873

Identifier: 158316873

GI number: 158316873

Start: 6126737

End: 6127552

Strand: Reverse

Name: 158316873

Synonym: Franean1_5117

Alternate gene names: NA

Gene position: 6127552-6126737 (Counterclockwise)

Preceding gene: 158316881

Following gene: 158316872

Centisome position: 68.22

GC content: 77.57

Gene sequence:

>816_bases
ATGTCGATCTTCGAGTTCTCGGGCATCGGAGCGGTGACGGGTGCGTCCCGCGGCGGAGCGGACGAGGCACCGGATCACCG
CCGCCGTGACGGCGGCGCGCGGCGGGCGGCCGCGGACCGGGCTGACGTGAGTCGGGTGGAGGCGGGCCGGGCGGGTGCCG
AGGGGGCCTGCGCGGGCCGCCGCGGGGTGGCGCCCGGCCTCGCCGCGCGGCTCGACGGCCTGCTGCCGCTGGAGGTGGGC
TACGACTTCGTGTCGGGCACCCGCAACCAGGTGTGGGTGCGCGGTGACCGGGCGGCCGTCCTCGAGAGGTGGCATCGGGA
CGGCGGGGTGGAGCTCATGGCCGCCGGCCGCCCGCTCCGGCTGGAGTCGGACCTCGACGGTGTGGGGGTGCGGGTGGTCG
ACCCGGTGGCGCGGCTGCCGCTCGCCGCGTTCCGGCCCCGGCCGCGGGGCGGCCTGGTCGACCTCGCGGACGGCTCCACG
CTGCGCTGGCTGCGCCCGCGCCGCCGGGCCGCCGGGTACGTCTTCGAGCGCGGATTCGTCGGCTGGAAGAACGCCAACGT
GGTCCGGTTCGCGCACGACGGGGTCGCGATCGTTCTGGTGGACCCGTCCGACCTGACGCGCCATCGCCCGCCGGTGGCCC
GCCCGGACTTCGGCGCCGGGACGGTGGCCGACCCGCGCCGGGGCTGGGTGCCCGAGGTCACGGTGCTCGTGCTGCTCGGC
TGGTTCCTCCTGCTGCTGGAGGACGACCCGGTGCCTCCGGCGCCCGCCTACCCCGATCTCGACCCGTCCGGGTGGCGCGC
CACGCCAGCGGGTTGA

Upstream 100 bases:

>100_bases
GGTCCGGGGTGCACTCGTTGACGAGAGCCATACCGGGCCGCCGCGCATTTCGGCGGGGGGTGTTCGGGGTCCCGCGGTGG
CTGGAGGGAGGGTGTCGATC

Downstream 100 bases:

>100_bases
CGGCCGGCCGGACCGGGATTATCTTCGAACATGCGTTCGATGTCGGGGTGGCCCGGCATCACGTGATCTGGCATCACGCG
GTTCGGCATCACGCGGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSIFEFSGIGAVTGASRGGADEAPDHRRRDGGARRAAADRADVSRVEAGRAGAEGACAGRRGVAPGLAARLDGLLPLEVG
YDFVSGTRNQVWVRGDRAAVLERWHRDGGVELMAAGRPLRLESDLDGVGVRVVDPVARLPLAAFRPRPRGGLVDLADGST
LRWLRPRRRAAGYVFERGFVGWKNANVVRFAHDGVAIVLVDPSDLTRHRPPVARPDFGAGTVADPRRGWVPEVTVLVLLG
WFLLLLEDDPVPPAPAYPDLDPSGWRATPAG

Sequences:

>Translated_271_residues
MSIFEFSGIGAVTGASRGGADEAPDHRRRDGGARRAAADRADVSRVEAGRAGAEGACAGRRGVAPGLAARLDGLLPLEVG
YDFVSGTRNQVWVRGDRAAVLERWHRDGGVELMAAGRPLRLESDLDGVGVRVVDPVARLPLAAFRPRPRGGLVDLADGST
LRWLRPRRRAAGYVFERGFVGWKNANVVRFAHDGVAIVLVDPSDLTRHRPPVARPDFGAGTVADPRRGWVPEVTVLVLLG
WFLLLLEDDPVPPAPAYPDLDPSGWRATPAG
>Mature_270_residues
SIFEFSGIGAVTGASRGGADEAPDHRRRDGGARRAAADRADVSRVEAGRAGAEGACAGRRGVAPGLAARLDGLLPLEVGY
DFVSGTRNQVWVRGDRAAVLERWHRDGGVELMAAGRPLRLESDLDGVGVRVVDPVARLPLAAFRPRPRGGLVDLADGSTL
RWLRPRRRAAGYVFERGFVGWKNANVVRFAHDGVAIVLVDPSDLTRHRPPVARPDFGAGTVADPRRGWVPEVTVLVLLGW
FLLLLEDDPVPPAPAYPDLDPSGWRATPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29005; Mature: 28874

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFEFSGIGAVTGASRGGADEAPDHRRRDGGARRAAADRADVSRVEAGRAGAEGACAGR
CCEEECCCCCEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGVAPGLAARLDGLLPLEVGYDFVSGTRNQVWVRGDRAAVLERWHRDGGVELMAAGRPLR
CCCCCCHHHHHCCCEEHHHCCHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCEE
LESDLDGVGVRVVDPVARLPLAAFRPRPRGGLVDLADGSTLRWLRPRRRAAGYVFERGFV
ECCCCCCCCEEEECHHHHCCHHHCCCCCCCCEEECCCCCEEEHHCHHHHHHCHHHHCCCC
GWKNANVVRFAHDGVAIVLVDPSDLTRHRPPVARPDFGAGTVADPRRGWVPEVTVLVLLG
CCCCCCEEEEECCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
WFLLLLEDDPVPPAPAYPDLDPSGWRATPAG
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIFEFSGIGAVTGASRGGADEAPDHRRRDGGARRAAADRADVSRVEAGRAGAEGACAGR
CEEECCCCCEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGVAPGLAARLDGLLPLEVGYDFVSGTRNQVWVRGDRAAVLERWHRDGGVELMAAGRPLR
CCCCCCHHHHHCCCEEHHHCCHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCEE
LESDLDGVGVRVVDPVARLPLAAFRPRPRGGLVDLADGSTLRWLRPRRRAAGYVFERGFV
ECCCCCCCCEEEECHHHHCCHHHCCCCCCCCEEECCCCCEEEHHCHHHHHHCHHHHCCCC
GWKNANVVRFAHDGVAIVLVDPSDLTRHRPPVARPDFGAGTVADPRRGWVPEVTVLVLLG
CCCCCCEEEEECCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
WFLLLLEDDPVPPAPAYPDLDPSGWRATPAG
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA