| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316847
Identifier: 158316847
GI number: 158316847
Start: 6093450
End: 6093704
Strand: Reverse
Name: 158316847
Synonym: Franean1_5090
Alternate gene names: NA
Gene position: 6093704-6093450 (Counterclockwise)
Preceding gene: 158316848
Following gene: 158316846
Centisome position: 67.84
GC content: 61.96
Gene sequence:
>255_bases GTGCTGACGGCCTACCTGCTGCTCCTGATCGCTCGGTGGGTCATCGACCTGGTGCTCGCGCTGAGCGGCTCCTTCCGGCC GACCGGCCCCCTGGTCCTGCTCTTCGAGATCGTGTACACGGCGACTGACCCTCCGTTGCGATTGATCCGGCGGTTCATCC CGCCGTTGAGGGTAGGTAGCGTTGCGCTTGACCTCGGGTTTCTGCTTCTCTTCATAGTGATCGTCGTTTTGCAGAGCTAT GCGCAGAGGCTGTGA
Upstream 100 bases:
>100_bases GTCGTAGCCAGGGCAAGATCATCCAGTAGGGTCGTCACCACTTCCCCTCGTCCTCCCGGGAGAGAGCACCATCAGCGCAC TTGGAACTCTGCTCTTTTGG
Downstream 100 bases:
>100_bases CTGAGGTCGTGTGCACACCGCGAGTGCGGGCAAGGCAGACTGCCCGCAGACCGCCCTCTCTTCGGGGAGCGGCGATGCCG CACGAGGAGGCAACGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MLTAYLLLLIARWVIDLVLALSGSFRPTGPLVLLFEIVYTATDPPLRLIRRFIPPLRVGSVALDLGFLLLFIVIVVLQSY AQRL
Sequences:
>Translated_84_residues MLTAYLLLLIARWVIDLVLALSGSFRPTGPLVLLFEIVYTATDPPLRLIRRFIPPLRVGSVALDLGFLLLFIVIVVLQSY AQRL >Mature_84_residues MLTAYLLLLIARWVIDLVLALSGSFRPTGPLVLLFEIVYTATDPPLRLIRRFIPPLRVGSVALDLGFLLLFIVIVVLQSY AQRL
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9436; Mature: 9436
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAYLLLLIARWVIDLVLALSGSFRPTGPLVLLFEIVYTATDPPLRLIRRFIPPLRVGS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH VALDLGFLLLFIVIVVLQSYAQRL HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTAYLLLLIARWVIDLVLALSGSFRPTGPLVLLFEIVYTATDPPLRLIRRFIPPLRVGS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHH VALDLGFLLLFIVIVVLQSYAQRL HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA